| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026055
Identifier: 238026055
GI number: 238026055
Start: 391355
End: 391942
Strand: Reverse
Name: 238026055
Synonym: bglu_1g03830
Alternate gene names: NA
Gene position: 391942-391355 (Counterclockwise)
Preceding gene: 238026057
Following gene: 238026054
Centisome position: 10.03
GC content: 55.61
Gene sequence:
>588_bases ATGGTAGTGACCGGTGATCAACAATTCGGGAGCAAAGGGAAGCGTCCGCGAGGATACAAGGTGGCGGGCGCGAACTCTCT GCAGCTCCGTAAGACCGCAGAAACGTTGATCCCGTTTCTGCAGAAAGAAGGTTGCTTCCAGCGCGGGGAGTACTTTCTCG ACGCCAATCACTTGCTTGAGAATGTGTTGCAACGCGCGGGATACAACTATCACGTAGCAGAAGACGCAGAGCTGACCGAC ACGGCCGCCTTCACAATCCCTGAAGAGCACCTGATCGTGATCAAGCAGGAGGTCTACGACGGCCTAGCGCGCGACGACCC GTTCTCACGATTCACCGTGGTGCATGAATTCAGTCACATCTACTTAAAGCACTCCGTGACACTGCATCGGAATGCCACGC TAGGGAACCATGAGTGGTGGGAAGACAGCGAGTGGCAAGCAAACAATCTCGCGGCTGAACTGATGATTCCCATGGGGGCC GTCAATCAGTATGGGCAGCAACCGTTGCTGCTTATGGCGGAATGTGGGGTCAGTGCGCCATCGGTCGCACATCGACTCGA CAACGTAGCGAAGAGAGGCTGGAAGTAA
Upstream 100 bases:
>100_bases GAGGACCGGGCCCTCTTAGCAGCATTCGCGCGTCGTCTAAGTGACGGGCAAGGTGTTCCCGACGACGTTAAACGATGGCT CACCAAAGGAGCGAAGAACC
Downstream 100 bases:
>100_bases GAACGCTGAAGTTAGCCGCTTCAGCGTTCCCAAAAAACTGACGTCTAGCGGTAAGCGTTGTTCTGCTTACGTCAGCGCCA TCAAGTTGAGCAGCTGGATT
Product: putative neutral zinc metallopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVVTGDQQFGSKGKRPRGYKVAGANSLQLRKTAETLIPFLQKEGCFQRGEYFLDANHLLENVLQRAGYNYHVAEDAELTD TAAFTIPEEHLIVIKQEVYDGLARDDPFSRFTVVHEFSHIYLKHSVTLHRNATLGNHEWWEDSEWQANNLAAELMIPMGA VNQYGQQPLLLMAECGVSAPSVAHRLDNVAKRGWK
Sequences:
>Translated_195_residues MVVTGDQQFGSKGKRPRGYKVAGANSLQLRKTAETLIPFLQKEGCFQRGEYFLDANHLLENVLQRAGYNYHVAEDAELTD TAAFTIPEEHLIVIKQEVYDGLARDDPFSRFTVVHEFSHIYLKHSVTLHRNATLGNHEWWEDSEWQANNLAAELMIPMGA VNQYGQQPLLLMAECGVSAPSVAHRLDNVAKRGWK >Mature_195_residues MVVTGDQQFGSKGKRPRGYKVAGANSLQLRKTAETLIPFLQKEGCFQRGEYFLDANHLLENVLQRAGYNYHVAEDAELTD TAAFTIPEEHLIVIKQEVYDGLARDDPFSRFTVVHEFSHIYLKHSVTLHRNATLGNHEWWEDSEWQANNLAAELMIPMGA VNQYGQQPLLLMAECGVSAPSVAHRLDNVAKRGWK
Specific function: Unknown
COG id: COG2856
COG function: function code E; Predicted Zn peptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22052; Mature: 22052
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTGDQQFGSKGKRPRGYKVAGANSLQLRKTAETLIPFLQKEGCFQRGEYFLDANHLLE CEECCCHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCEEECHHHHHH NVLQRAGYNYHVAEDAELTDTAAFTIPEEHLIVIKQEVYDGLARDDPFSRFTVVHEFSHI HHHHHCCCCEEECCCCCCCCCEEEECCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHE YLKHSVTLHRNATLGNHEWWEDSEWQANNLAAELMIPMGAVNQYGQQPLLLMAECGVSAP EEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCH SVAHRLDNVAKRGWK HHHHHHHHHHHCCCC >Mature Secondary Structure MVVTGDQQFGSKGKRPRGYKVAGANSLQLRKTAETLIPFLQKEGCFQRGEYFLDANHLLE CEECCCHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHCCCEEECHHHHHH NVLQRAGYNYHVAEDAELTDTAAFTIPEEHLIVIKQEVYDGLARDDPFSRFTVVHEFSHI HHHHHCCCCEEECCCCCCCCCEEEECCCCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHE YLKHSVTLHRNATLGNHEWWEDSEWQANNLAAELMIPMGAVNQYGQQPLLLMAECGVSAP EEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCCH SVAHRLDNVAKRGWK HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA