Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026054

Identifier: 238026054

GI number: 238026054

Start: 390167

End: 391003

Strand: Reverse

Name: 238026054

Synonym: bglu_1g03820

Alternate gene names: NA

Gene position: 391003-390167 (Counterclockwise)

Preceding gene: 238026055

Following gene: 238026053

Centisome position: 10.01

GC content: 57.95

Gene sequence:

>837_bases
ATGGATACAGCACGTTGCAATACAGATGGACGGGTCTACACTGCGCCTGAATTCGAAGCGCTCCCGGCGAATGAGATCGC
GCATATGCGTCGCTCACTTGTCTGCGTCGAATGCAATGGCCCGGGATTCTTCCGACGGAAGTCGCGAAGTGGCCAAGCCG
CATGCTTTGGCGCCCGCCCCCACGCTCCAAGCTGTACTACACCGGATACCGAGTCGCGAACCCTTACGGGAACACCTGAG
GACCATGAACCACTTGTTAATCTCGGCGACCACGTCGAGGTAGACCTAACGTTTGGAAGTCGGCAGGTCCATGTCGTACC
TCCGCGCGACGGCGACGAGAGACCTACGCCTGGAGACGAGCGCCGAGGACGCCGATTTACAGGGACGGCCGGCCGTACGG
CGGTCAGTAGGCGACGGCCCTCGAGTTTACTCAGGATGCTGGTTGAATCGGAAAACTTTCGAAACTCGAACACCACGATC
TCAATTCCGGACCATATTCAGGGTACTCCGCGTGAGGTATTCGTCGAATTCTCCGAAATTGAACAGGATGCCCTCGTGGG
CCAGTACCGCGGCTACTGGGGCTTCGTCGCGGAAGGAAAGATGGACGCGAACAGCGCCCTGTGGCTCAACTCTGGTGGAA
CTGGCGACGTAAGCGTCCTGATACCGCCCGATCTCGTCGGCGTCCTGTTCGAGCGTTATGGGGCAACTGATGCCGAAGAT
TTCACAGGAGCGTACGTTCTGGTGTTCGGCTACTTAAGGCTGAGCAAACGAAACAAGCAGTTCGTCCGAGTCGAAGACGT
CGACACTTGCGTTCTCTACGAGCCACCTGTCCACTGA

Upstream 100 bases:

>100_bases
ATCAAGCATGGCCCATCCCCGTGAAACGGAAGTAACACGCACCCACCCGGGCCGTTGGCCCGGGTCTAATTGGTCGAACG
TTTTTGTATGAGCAATGCCT

Downstream 100 bases:

>100_bases
TTTTAATAATCGACCACTGGTCGCGCGACAATAGGCCAGCCTTTGCGCGCGACTTCCATACGCTGGAGCAATCATGGCAC
GCGTGAGCCGGATGGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDTARCNTDGRVYTAPEFEALPANEIAHMRRSLVCVECNGPGFFRRKSRSGQAACFGARPHAPSCTTPDTESRTLTGTPE
DHEPLVNLGDHVEVDLTFGSRQVHVVPPRDGDERPTPGDERRGRRFTGTAGRTAVSRRRPSSLLRMLVESENFRNSNTTI
SIPDHIQGTPREVFVEFSEIEQDALVGQYRGYWGFVAEGKMDANSALWLNSGGTGDVSVLIPPDLVGVLFERYGATDAED
FTGAYVLVFGYLRLSKRNKQFVRVEDVDTCVLYEPPVH

Sequences:

>Translated_278_residues
MDTARCNTDGRVYTAPEFEALPANEIAHMRRSLVCVECNGPGFFRRKSRSGQAACFGARPHAPSCTTPDTESRTLTGTPE
DHEPLVNLGDHVEVDLTFGSRQVHVVPPRDGDERPTPGDERRGRRFTGTAGRTAVSRRRPSSLLRMLVESENFRNSNTTI
SIPDHIQGTPREVFVEFSEIEQDALVGQYRGYWGFVAEGKMDANSALWLNSGGTGDVSVLIPPDLVGVLFERYGATDAED
FTGAYVLVFGYLRLSKRNKQFVRVEDVDTCVLYEPPVH
>Mature_278_residues
MDTARCNTDGRVYTAPEFEALPANEIAHMRRSLVCVECNGPGFFRRKSRSGQAACFGARPHAPSCTTPDTESRTLTGTPE
DHEPLVNLGDHVEVDLTFGSRQVHVVPPRDGDERPTPGDERRGRRFTGTAGRTAVSRRRPSSLLRMLVESENFRNSNTTI
SIPDHIQGTPREVFVEFSEIEQDALVGQYRGYWGFVAEGKMDANSALWLNSGGTGDVSVLIPPDLVGVLFERYGATDAED
FTGAYVLVFGYLRLSKRNKQFVRVEDVDTCVLYEPPVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30837; Mature: 30837

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTARCNTDGRVYTAPEFEALPANEIAHMRRSLVCVECNGPGFFRRKSRSGQAACFGARP
CCCCEECCCCEEEECCCCCCCCHHHHHHHHHCEEEEEECCCCCEEECCCCCCEEEECCCC
HAPSCTTPDTESRTLTGTPEDHEPLVNLGDHVEVDLTFGSRQVHVVPPRDGDERPTPGDE
CCCCCCCCCCCCEEEECCCCCCCHHCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCHH
RRGRRFTGTAGRTAVSRRRPSSLLRMLVESENFRNSNTTISIPDHIQGTPREVFVEFSEI
HCCCEEECCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHEEEEHHHH
EQDALVGQYRGYWGFVAEGKMDANSALWLNSGGTGDVSVLIPPDLVGVLFERYGATDAED
HHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHCCCCCCH
FTGAYVLVFGYLRLSKRNKQFVRVEDVDTCVLYEPPVH
HCCHHEEEHHHHHHCCCCCEEEEEECCCEEEEECCCCC
>Mature Secondary Structure
MDTARCNTDGRVYTAPEFEALPANEIAHMRRSLVCVECNGPGFFRRKSRSGQAACFGARP
CCCCEECCCCEEEECCCCCCCCHHHHHHHHHCEEEEEECCCCCEEECCCCCCEEEECCCC
HAPSCTTPDTESRTLTGTPEDHEPLVNLGDHVEVDLTFGSRQVHVVPPRDGDERPTPGDE
CCCCCCCCCCCCEEEECCCCCCCHHCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCCHH
RRGRRFTGTAGRTAVSRRRPSSLLRMLVESENFRNSNTTISIPDHIQGTPREVFVEFSEI
HCCCEEECCCCCHHHHHCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHEEEEHHHH
EQDALVGQYRGYWGFVAEGKMDANSALWLNSGGTGDVSVLIPPDLVGVLFERYGATDAED
HHHHHHHHCCCEEEEEECCCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHCCCCCCH
FTGAYVLVFGYLRLSKRNKQFVRVEDVDTCVLYEPPVH
HCCHHEEEHHHHHHCCCCCEEEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA