Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238026057

Identifier: 238026057

GI number: 238026057

Start: 397352

End: 398143

Strand: Reverse

Name: 238026057

Synonym: bglu_1g03850

Alternate gene names: NA

Gene position: 398143-397352 (Counterclockwise)

Preceding gene: 238026058

Following gene: 238026055

Centisome position: 10.19

GC content: 67.17

Gene sequence:

>792_bases
ATGAGCTACGCGCCCTCCCTGTTCGGCGGCAACACGCCGCCGCCTTCCTCCGCCCCGCACTCGGCCTCGTCGACCGACGC
CAGCTTCCAGGCGCGTTCGCTGCTCGACCTGCTGTACGACGGCTTCTTCATGATGTTCCTGCTGAAGAACGGCCGCGAGC
CCGGCGAGGCCAACGAATTCCGCGGGCGAATCCAGGAGTTCCTCGCCGATTTCGAGCGCGGCGCGAAAAAGCTCAACGTC
GGCGCCGACGATGTGTACGCCGCCAAGTTCGCGTTCTGCGCCGCGATCGACGAGGCCGTGCTGTCGTCGCAGTTCAAGGT
GCGCGCCGAATGGGAGCAGCGGCCGCTGCAGCTCGTGCTGTTCGGCGAGCAGCTGGCCGGCGAGAAGTTCTTCCAGTATC
TCGAGGAATGCCGCGCGCGCGGCGCCGCGCGCCTGCAGTCGCTCGAGGTGTTCCACATGTGCCTGCTGCTCGGCTTCCAG
GGCAAGTACCTGCTCGAAGGGCCCGAGAAGCTCGCCTACCTGACCGCGCGGATCGGCGACGAGATCGCGCAGATGAAGGG
CAAGCGCGCGCCGTTCGCGCCACACTGGGCGCTGCCCGACCAGATCGCGCACCGCCTGAAGCGCGAGGTGCCGCTGTGGG
CCATCGGCGCCGTGTTCGCGCTGGTGGGGCTGCTCGCGTTCATCGGGCTCAATACCTACCTGCGCGACCATACGCTGAAG
GCGCTCGCGCCGTACTCGCAGATCATCAAGGTCGGACCGGAATCGGCGAACCTGACGATTTCGCTGCCTTGA

Upstream 100 bases:

>100_bases
GCAGCCCGCTCTATGAGCGCATGCTGCAGTCGCAGTCGGCGATGATCTACGCGCCGTCGGGCATCAACGACCTCAAATTC
GAACTGATCGCCGTCACATC

Downstream 100 bases:

>100_bases
GGAGGGCGCGGCGGCCGTGACGGCTAGAGTCCGGGGCGGTGCCCCGGGCGGCTCGATCACGGCCGCGGCCCGGCTTGCCC
GAGCAGCGGCCTGGCGGCGC

Product: OmpA family protein

Products: NA

Alternate protein names: OmpA Family Protein; Outer Membrane Protein; Type IV/VI Secretion System Protein; OmpA/MotB Domain-Containing Protein; Type VI Secretion System Core Protein; Secretion System Protein; Flagellar Motor Rotation Protein MotB; Replication/Virulence Associated Protein; DotU Family Type IV / VI Secretion System Protein; Transmembrane Protein; Type VI Secretion System Protein; OmpA/MotB Domain Protein; Type VI Secretion System Protein ImpK; OmpA-Family Protein; Type IV / VI Secretion System Transmembrane Protein; Type VI Secretion; Outer Membrane Protein Ompa/Motb Family; OmpA/MotB; Flagellar Motor Protein; Type IV / VI Secretion System Family Protein DotU

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSYAPSLFGGNTPPPSSAPHSASSTDASFQARSLLDLLYDGFFMMFLLKNGREPGEANEFRGRIQEFLADFERGAKKLNV
GADDVYAAKFAFCAAIDEAVLSSQFKVRAEWEQRPLQLVLFGEQLAGEKFFQYLEECRARGAARLQSLEVFHMCLLLGFQ
GKYLLEGPEKLAYLTARIGDEIAQMKGKRAPFAPHWALPDQIAHRLKREVPLWAIGAVFALVGLLAFIGLNTYLRDHTLK
ALAPYSQIIKVGPESANLTISLP

Sequences:

>Translated_263_residues
MSYAPSLFGGNTPPPSSAPHSASSTDASFQARSLLDLLYDGFFMMFLLKNGREPGEANEFRGRIQEFLADFERGAKKLNV
GADDVYAAKFAFCAAIDEAVLSSQFKVRAEWEQRPLQLVLFGEQLAGEKFFQYLEECRARGAARLQSLEVFHMCLLLGFQ
GKYLLEGPEKLAYLTARIGDEIAQMKGKRAPFAPHWALPDQIAHRLKREVPLWAIGAVFALVGLLAFIGLNTYLRDHTLK
ALAPYSQIIKVGPESANLTISLP
>Mature_262_residues
SYAPSLFGGNTPPPSSAPHSASSTDASFQARSLLDLLYDGFFMMFLLKNGREPGEANEFRGRIQEFLADFERGAKKLNVG
ADDVYAAKFAFCAAIDEAVLSSQFKVRAEWEQRPLQLVLFGEQLAGEKFFQYLEECRARGAARLQSLEVFHMCLLLGFQG
KYLLEGPEKLAYLTARIGDEIAQMKGKRAPFAPHWALPDQIAHRLKREVPLWAIGAVFALVGLLAFIGLNTYLRDHTLKA
LAPYSQIIKVGPESANLTISLP

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29160; Mature: 29029

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAPSLFGGNTPPPSSAPHSASSTDASFQARSLLDLLYDGFFMMFLLKNGREPGEANEF
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RGRIQEFLADFERGAKKLNVGADDVYAAKFAFCAAIDEAVLSSQFKVRAEWEQRPLQLVL
HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCEEEEE
FGEQLAGEKFFQYLEECRARGAARLQSLEVFHMCLLLGFQGKYLLEGPEKLAYLTARIGD
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
EIAQMKGKRAPFAPHWALPDQIAHRLKREVPLWAIGAVFALVGLLAFIGLNTYLRDHTLK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAPYSQIIKVGPESANLTISLP
HHHHHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure 
SYAPSLFGGNTPPPSSAPHSASSTDASFQARSLLDLLYDGFFMMFLLKNGREPGEANEF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RGRIQEFLADFERGAKKLNVGADDVYAAKFAFCAAIDEAVLSSQFKVRAEWEQRPLQLVL
HHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCEEEEE
FGEQLAGEKFFQYLEECRARGAARLQSLEVFHMCLLLGFQGKYLLEGPEKLAYLTARIGD
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHH
EIAQMKGKRAPFAPHWALPDQIAHRLKREVPLWAIGAVFALVGLLAFIGLNTYLRDHTLK
HHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAPYSQIIKVGPESANLTISLP
HHHHHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA