| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is mlaA [H]
Identifier: 238025997
GI number: 238025997
Start: 344299
End: 345285
Strand: Direct
Name: mlaA [H]
Synonym: bglu_1g03230
Alternate gene names: 238025997
Gene position: 344299-345285 (Clockwise)
Preceding gene: 238025996
Following gene: 238025998
Centisome position: 8.81
GC content: 69.71
Gene sequence:
>987_bases ATGCAGACCATGCGCCTCAGGAACGCGGGCTTGACCGTAGCGGCAGTTGCCGCGCTGAGCGGTTGCGCCACCGTTCAGAC GCCCACCAAGGGCGATCCGTTCGAAAGCTTCAATCGAACGATCTACAAGTTCAACGACACCGTCGACACCTATGCGTTGA AGCCCGTCGCCCAGGGCTACCAATGGGCGGTGCCGCAGCCGGTGCGCAGCAGCGTGACGAACTTCTTCTCGAACATCGGC GACGTCTACATCGCCGCCAACAACCTCGTGCAGCTGCGCATCGCCGACGGCGTGGGCGACATCATGCGCGTGGTGATCAA CACGGTGTTCGGCGTGGGCGGCCTGTTCGACGTGGCGACGGTGGCGAAGCTGCCCAAGCACAGCAACGACTTCGGCATCA CGCTCGGCCACTACGGCGTGCCATCCGGCCCGTACGTGGTGCTGCCGTTCCTCGGGCCGAGCACGGTGCGCGACACGGCC GGCCTCGGGGTCGACTACGTCGGCAACCCGCTCACCTGGGTGAATTCGGACGCGGTGAGCTGGAGCCTGTTCGGCGTGAA CCTGATCAATACGCGCGCGAACCTGCTCGGCGCCGGCGACATCCTCGACGCGGCCGCGATCGACAAGTACTCGTTCGTGC GCAACGCCTACCTGCAGCGCCGCCAGTCGCTGATCGCCGCCTCGGGCGGCCCCGGCGGCAAGGCGGCCGCCGCGAACGTG CCCGACTACGGCGCCGAGGCGCTGCCGAAGTACGATCTGCCCGAAGACGGCGCGGCGCCGGCGGCCGCGGCGAGCAGCAC GGCAGCGGGCGGTGCGGCAGCGGGCGCGGCGGCGCCGGCCCAGGATGCCGCTTCGGCGGCTTCGGCGCCGGCCGCGGCGT CGGCTGCGGCCATGCCGAATCCGGCCAGTGCCACCCACGTGCCGGCGCAGAACATCGTGCCGCCCTCGCCGAACGGTTTT CATTGGCCGAGCCTGCGGCTGCGCTGA
Upstream 100 bases:
>100_bases AAGCCGGCCGCGGCGCCGGGGGCGGCCGCCCATTGAGCGCTCGCGCCGTCCCCGCCGGCGAGGCACCAGACGAAGAAAAG AGAAAATAGGGAACACGATC
Downstream 100 bases:
>100_bases TCGCGCCGCGGCCGTTACAGCCGGAAACGTTTGTGACGGCGGCGGATGCAGCATGAAGTCCGCCGCTGGTTCAAAATGCA GTACCGACTCACTTCGCAGG
Product: VacJ-like lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MQTMRLRNAGLTVAAVAALSGCATVQTPTKGDPFESFNRTIYKFNDTVDTYALKPVAQGYQWAVPQPVRSSVTNFFSNIG DVYIAANNLVQLRIADGVGDIMRVVINTVFGVGGLFDVATVAKLPKHSNDFGITLGHYGVPSGPYVVLPFLGPSTVRDTA GLGVDYVGNPLTWVNSDAVSWSLFGVNLINTRANLLGAGDILDAAAIDKYSFVRNAYLQRRQSLIAASGGPGGKAAAANV PDYGAEALPKYDLPEDGAAPAAAASSTAAGGAAAGAAAPAQDAASAASAPAAASAAAMPNPASATHVPAQNIVPPSPNGF HWPSLRLR
Sequences:
>Translated_328_residues MQTMRLRNAGLTVAAVAALSGCATVQTPTKGDPFESFNRTIYKFNDTVDTYALKPVAQGYQWAVPQPVRSSVTNFFSNIG DVYIAANNLVQLRIADGVGDIMRVVINTVFGVGGLFDVATVAKLPKHSNDFGITLGHYGVPSGPYVVLPFLGPSTVRDTA GLGVDYVGNPLTWVNSDAVSWSLFGVNLINTRANLLGAGDILDAAAIDKYSFVRNAYLQRRQSLIAASGGPGGKAAAANV PDYGAEALPKYDLPEDGAAPAAAASSTAAGGAAAGAAAPAQDAASAASAPAAASAAAMPNPASATHVPAQNIVPPSPNGF HWPSLRLR >Mature_328_residues MQTMRLRNAGLTVAAVAALSGCATVQTPTKGDPFESFNRTIYKFNDTVDTYALKPVAQGYQWAVPQPVRSSVTNFFSNIG DVYIAANNLVQLRIADGVGDIMRVVINTVFGVGGLFDVATVAKLPKHSNDFGITLGHYGVPSGPYVVLPFLGPSTVRDTA GLGVDYVGNPLTWVNSDAVSWSLFGVNLINTRANLLGAGDILDAAAIDKYSFVRNAYLQRRQSLIAASGGPGGKAAAANV PDYGAEALPKYDLPEDGAAPAAAASSTAAGGAAAGAAAPAQDAASAASAPAAASAAAMPNPASATHVPAQNIVPPSPNGF HWPSLRLR
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=257, Percent_Identity=37.7431906614786, Blast_Score=139, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 33638; Mature: 33638
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTMRLRNAGLTVAAVAALSGCATVQTPTKGDPFESFNRTIYKFNDTVDTYALKPVAQGY CCCCEECCCCCHHHHHHHHHCCCEECCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHCCC QWAVPQPVRSSVTNFFSNIGDVYIAANNLVQLRIADGVGDIMRVVINTVFGVGGLFDVAT CCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH VAKLPKHSNDFGITLGHYGVPSGPYVVLPFLGPSTVRDTAGLGVDYVGNPLTWVNSDAVS HHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCEEECCCCEE WSLFGVNLINTRANLLGAGDILDAAAIDKYSFVRNAYLQRRQSLIAASGGPGGKAAAANV EEEEEEEEECCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC PDYGAEALPKYDLPEDGAAPAAAASSTAAGGAAAGAAAPAQDAASAASAPAAASAAAMPN CCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCC PASATHVPAQNIVPPSPNGFHWPSLRLR CCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQTMRLRNAGLTVAAVAALSGCATVQTPTKGDPFESFNRTIYKFNDTVDTYALKPVAQGY CCCCEECCCCCHHHHHHHHHCCCEECCCCCCCCHHHHCCEEEEECCCHHHHHHHHHHCCC QWAVPQPVRSSVTNFFSNIGDVYIAANNLVQLRIADGVGDIMRVVINTVFGVGGLFDVAT CCCCCCHHHHHHHHHHHHCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHH VAKLPKHSNDFGITLGHYGVPSGPYVVLPFLGPSTVRDTAGLGVDYVGNPLTWVNSDAVS HHHCCCCCCCCEEEECCCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCEEECCCCEE WSLFGVNLINTRANLLGAGDILDAAAIDKYSFVRNAYLQRRQSLIAASGGPGGKAAAANV EEEEEEEEECCHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCC PDYGAEALPKYDLPEDGAAPAAAASSTAAGGAAAGAAAPAQDAASAASAPAAASAAAMPN CCCCHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCC PASATHVPAQNIVPPSPNGFHWPSLRLR CCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]