| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025780
Identifier: 238025780
GI number: 238025780
Start: 117651
End: 118055
Strand: Reverse
Name: 238025780
Synonym: bglu_1g01050
Alternate gene names: NA
Gene position: 118055-117651 (Counterclockwise)
Preceding gene: 238025781
Following gene: 238025779
Centisome position: 3.02
GC content: 75.56
Gene sequence:
>405_bases ATGCAACGGTTGATCCGCACGGCCGTCGGCGCCGCCCTCGTCGCCTCGCTGGCCGCGTGCGTCGTCACGCCGCCGCCGGC GAAGCGGCCGGTTCCGCGCCCGCGCCCCGCTCAACCGGCCCCCGTCCAGCCGCCTCCGCCGCCGCAGCCAGCCCCGCCGC CGATCGGCGTCGAACGCATGAACGACATCCTCGGCCGGATCGACAGCCTCGGCCGCCGCATCGACACGCGCGTCAACGGC GGCGACTATCCCCCGCCGCAAGGCCAGGCGCTGCATCGCCGGCTCGAAGTGATCCGCCAGGAGGCGACCGACATGGGCGC GCAGCACGGCGGCGGCCTGACCGGCGACGAGCAGCGCGTGCTGAACCAGGAACTCGACACGGCCGCGCGCGCGATCGGCG TCTGA
Upstream 100 bases:
>100_bases CTTCCAAAGGCCGGCCCGCAGCTGGCCCCCGCCGGCATCGCGGGGGTGGGCTTGCGGGCCGGCTTTCGCTTCACCGATAC GACCATCAGGAGAATGATCC
Downstream 100 bases:
>100_bases ACCCGGCGCGCCACCGGCGGCCCCGCACGCGCGGGTAGGCCGCCGGTGGCGCGCCGCCCCCGACTCTCCGCGTTTGCACG TTCATGGCGCCGCCGCACGG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MQRLIRTAVGAALVASLAACVVTPPPAKRPVPRPRPAQPAPVQPPPPPQPAPPPIGVERMNDILGRIDSLGRRIDTRVNG GDYPPPQGQALHRRLEVIRQEATDMGAQHGGGLTGDEQRVLNQELDTAARAIGV
Sequences:
>Translated_134_residues MQRLIRTAVGAALVASLAACVVTPPPAKRPVPRPRPAQPAPVQPPPPPQPAPPPIGVERMNDILGRIDSLGRRIDTRVNG GDYPPPQGQALHRRLEVIRQEATDMGAQHGGGLTGDEQRVLNQELDTAARAIGV >Mature_134_residues MQRLIRTAVGAALVASLAACVVTPPPAKRPVPRPRPAQPAPVQPPPPPQPAPPPIGVERMNDILGRIDSLGRRIDTRVNG GDYPPPQGQALHRRLEVIRQEATDMGAQHGGGLTGDEQRVLNQELDTAARAIGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14212; Mature: 14212
Theoretical pI: Translated: 11.02; Mature: 11.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLIRTAVGAALVASLAACVVTPPPAKRPVPRPRPAQPAPVQPPPPPQPAPPPIGVERM CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH NDILGRIDSLGRRIDTRVNGGDYPPPQGQALHRRLEVIRQEATDMGAQHGGGLTGDEQRV HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LNQELDTAARAIGV HHHHHHHHHHHHCC >Mature Secondary Structure MQRLIRTAVGAALVASLAACVVTPPPAKRPVPRPRPAQPAPVQPPPPPQPAPPPIGVERM CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH NDILGRIDSLGRRIDTRVNGGDYPPPQGQALHRRLEVIRQEATDMGAQHGGGLTGDEQRV HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LNQELDTAARAIGV HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA