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The map label for this gene is ydgJ [H]

Identifier: 238025781

GI number: 238025781

Start: 118275

End: 119327

Strand: Reverse

Name: ydgJ [H]

Synonym: bglu_1g01060

Alternate gene names: 238025781

Gene position: 119327-118275 (Counterclockwise)

Preceding gene: 238025783

Following gene: 238025780

Centisome position: 3.05

GC content: 72.08

Gene sequence:

>1053_bases
ATGACGTCTTTGCTGAAAATTGGTCTGATGGGTTTCGGTTTCGCCGGCGCGACCTTCCACGCCCCGGTGATCGCGCACAG
CGGCCGCACCCGGATCGCCGCGATCGCGACCGGGCAGCCGGACAAGGCGCGGGCCGCGTATCCGGGCGCGGCGGTGGTGG
CCGATCTCGACGCGCTGCTCGCGCACGGCGAGGTCGAATGCGTGGTGATCGCCACGCCGAACGACACCCACTTCGACCTC
GCGCGCCGCGCGCTCGAGGCCGGCAAGCACGTGGTCGTGGACAAGCCGGTCACGCTCGGCTCGGCCGAGGCGCGCACGCT
CGCGCGCCTGGCCCGCGAGCGCGGCCTGGTGTTCGCGCCGTTCCACAACCGCCGCTGGGACGGCGATTTCCTCACCGTGC
GCGAGCTGGTGGCGGGCGGCGAGCTTGGCCGCATCACCTGGTTCGAATCGCATTTCGATCGCTTCCGCCCGCAGATCCGC
CAGCGCTGGCGCGAGGACGCGACGCGCGGCGGCGGCCTGCTGTTCGATCTCGGCCCGCACCTGATCGACCAGGCGCTCAC
GCTGTTCGGCGCACCCGAGACGGTCAGCGCCACGGTGCGGGCGCGCCGCGACGGGGCGGAGGCGGCCGATCTCGTCCATC
TGCTGCTCGGCTATCCCGACAAGGAGGTGCTGCTGCACGCGAGCGCGCTGGCCGCGATCGAGCCGGCGCGCTTCACGATC
CTCGGCACGCGCGGCGGCTATCAGAAGTTCGGCCTCGATACGCAGGAGGACCAGCTGAAGGCCGGGCTCACGCCCGACCA
TGTCGAGTTCGGCGGCGGCAACCCGCCCGGCGTGCTGCGCCTGCTCGACGGCGAGATCGAGACCGAGCGGCCGGTGCCCA
CGCTCGACGGCCAGTACGCGGAGTTCTATCGCGCGCTGGCCGCCTCGGTGCAGGACGGAGCGCCGTTCCCGGTGGCCGCG
CAGGACGCGGTGGACGTGATGGCGATCATCGAGCTGGCCGATCGCAGCGCGCGCGAGGGCCGCCAGCTGCCGTTCGTGCG
CGAAACGTTCTGA

Upstream 100 bases:

>100_bases
ATGCCGTGCCAGAATAGCCGGTCGCGCAGGCCGCCGCGCGCCGGTGGCGCCGGCCTGCAATCGCGCTCCGTTCGATTTCG
CACGCTGACAGGATTCGCTC

Downstream 100 bases:

>100_bases
GCCGCACCGGCGCGGCGCCGGCGGCGTGACAGGCCGGCCGCTCGCGCCGCCGCCGCCAAAAACAATCCGTTACAAAAGCG
TCGGGAACTCGCGCCGGACC

Product: Gfo/Idh/MocA family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTSLLKIGLMGFGFAGATFHAPVIAHSGRTRIAAIATGQPDKARAAYPGAAVVADLDALLAHGEVECVVIATPNDTHFDL
ARRALEAGKHVVVDKPVTLGSAEARTLARLARERGLVFAPFHNRRWDGDFLTVRELVAGGELGRITWFESHFDRFRPQIR
QRWREDATRGGGLLFDLGPHLIDQALTLFGAPETVSATVRARRDGAEAADLVHLLLGYPDKEVLLHASALAAIEPARFTI
LGTRGGYQKFGLDTQEDQLKAGLTPDHVEFGGGNPPGVLRLLDGEIETERPVPTLDGQYAEFYRALAASVQDGAPFPVAA
QDAVDVMAIIELADRSAREGRQLPFVRETF

Sequences:

>Translated_350_residues
MTSLLKIGLMGFGFAGATFHAPVIAHSGRTRIAAIATGQPDKARAAYPGAAVVADLDALLAHGEVECVVIATPNDTHFDL
ARRALEAGKHVVVDKPVTLGSAEARTLARLARERGLVFAPFHNRRWDGDFLTVRELVAGGELGRITWFESHFDRFRPQIR
QRWREDATRGGGLLFDLGPHLIDQALTLFGAPETVSATVRARRDGAEAADLVHLLLGYPDKEVLLHASALAAIEPARFTI
LGTRGGYQKFGLDTQEDQLKAGLTPDHVEFGGGNPPGVLRLLDGEIETERPVPTLDGQYAEFYRALAASVQDGAPFPVAA
QDAVDVMAIIELADRSAREGRQLPFVRETF
>Mature_349_residues
TSLLKIGLMGFGFAGATFHAPVIAHSGRTRIAAIATGQPDKARAAYPGAAVVADLDALLAHGEVECVVIATPNDTHFDLA
RRALEAGKHVVVDKPVTLGSAEARTLARLARERGLVFAPFHNRRWDGDFLTVRELVAGGELGRITWFESHFDRFRPQIRQ
RWREDATRGGGLLFDLGPHLIDQALTLFGAPETVSATVRARRDGAEAADLVHLLLGYPDKEVLLHASALAAIEPARFTIL
GTRGGYQKFGLDTQEDQLKAGLTPDHVEFGGGNPPGVLRLLDGEIETERPVPTLDGQYAEFYRALAASVQDGAPFPVAAQ
DAVDVMAIIELADRSAREGRQLPFVRETF

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=338, Percent_Identity=45.2662721893491, Blast_Score=300, Evalue=8e-83,
Organism=Escherichia coli, GI1789848, Length=333, Percent_Identity=33.6336336336336, Blast_Score=191, Evalue=9e-50,
Organism=Escherichia coli, GI1787574, Length=206, Percent_Identity=28.1553398058252, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87082405, Length=262, Percent_Identity=24.4274809160305, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37866; Mature: 37735

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLLKIGLMGFGFAGATFHAPVIAHSGRTRIAAIATGQPDKARAAYPGAAVVADLDALL
CCCHHHHHHHHCCCCCCCEECCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
AHGEVECVVIATPNDTHFDLARRALEAGKHVVVDKPVTLGSAEARTLARLARERGLVFAP
HCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEC
FHNRRWDGDFLTVRELVAGGELGRITWFESHFDRFRPQIRQRWREDATRGGGLLFDLGPH
CCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
LIDQALTLFGAPETVSATVRARRDGAEAADLVHLLLGYPDKEVLLHASALAAIEPARFTI
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEE
LGTRGGYQKFGLDTQEDQLKAGLTPDHVEFGGGNPPGVLRLLDGEIETERPVPTLDGQYA
EECCCCCHHCCCCCCHHHHHCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHH
EFYRALAASVQDGAPFPVAAQDAVDVMAIIELADRSAREGRQLPFVRETF
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
>Mature Secondary Structure 
TSLLKIGLMGFGFAGATFHAPVIAHSGRTRIAAIATGQPDKARAAYPGAAVVADLDALL
CCHHHHHHHHCCCCCCCEECCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
AHGEVECVVIATPNDTHFDLARRALEAGKHVVVDKPVTLGSAEARTLARLARERGLVFAP
HCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEC
FHNRRWDGDFLTVRELVAGGELGRITWFESHFDRFRPQIRQRWREDATRGGGLLFDLGPH
CCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
LIDQALTLFGAPETVSATVRARRDGAEAADLVHLLLGYPDKEVLLHASALAAIEPARFTI
HHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEE
LGTRGGYQKFGLDTQEDQLKAGLTPDHVEFGGGNPPGVLRLLDGEIETERPVPTLDGQYA
EECCCCCHHCCCCCCHHHHHCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHH
EFYRALAASVQDGAPFPVAAQDAVDVMAIIELADRSAREGRQLPFVRETF
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]