| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238025710
Identifier: 238025710
GI number: 238025710
Start: 31760
End: 32179
Strand: Reverse
Name: 238025710
Synonym: bglu_1g00320
Alternate gene names: NA
Gene position: 32179-31760 (Counterclockwise)
Preceding gene: 238025711
Following gene: 238025709
Centisome position: 0.82
GC content: 71.19
Gene sequence:
>420_bases CTGACGATGGCCGCGCCGCTCCCCCTCGCACGCCGCGCGCCCCGGGCCGCCGCGCATGGCTTCACGATGATCGAGGTGCT GATCGCGCTGGCGATCATCGCGGTCGCGCTGGCCGCCTCGATCCGCGCGGTCGGCACGCTCGCCAGCAACGCCGGCGCGC TGAACGACCGCCTGCTCGCGAGCTGGAGCGCCGACAACGCGCTCGGCCAGCTGCGGCTCGCGCACGCGTGGCCCGACATC GGCGAGCAGCAGTTCGACTGTTCGCAGGGCAACGTCGCGCTGACCTGCACCGAGCGCGTCAGCAGCACGCCGAATCCGAC ATTCCGCCGCGTCGAGGTGGCGGTACGCAAGACGGGCGAAGCCAGCGTGCTCGCCCAGATGGTCACGGTGGTCGCGAATG AAACCAACCGCTCGCTTTAA
Upstream 100 bases:
>100_bases TCGGCACCGAACCGGTCGACGTGCCGGTGCGCATCACGCTCTATTCCGGGATCGGCAGCGTGACCATCGTCGGCACCGGC AACGGCCGCTACGAGGTGCG
Downstream 100 bases:
>100_bases GCGCTGCGGCGCGCGCGCCGATCGCGGCTTCACGCTGATCGAGATGCTGATCGCGATCACGATCCTCGCCGTGCTCGCGC TGCTGTCGTGGCGCGGGCTC
Product: general secretion pathway protein I
Products: NA
Alternate protein names: Type II Secretory Pathway Pseudopilin PulG; General Secretory Pathway I Transmembrane Protein
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTMAAPLPLARRAPRAAAHGFTMIEVLIALAIIAVALAASIRAVGTLASNAGALNDRLLASWSADNALGQLRLAHAWPDI GEQQFDCSQGNVALTCTERVSSTPNPTFRRVEVAVRKTGEASVLAQMVTVVANETNRSL
Sequences:
>Translated_139_residues MTMAAPLPLARRAPRAAAHGFTMIEVLIALAIIAVALAASIRAVGTLASNAGALNDRLLASWSADNALGQLRLAHAWPDI GEQQFDCSQGNVALTCTERVSSTPNPTFRRVEVAVRKTGEASVLAQMVTVVANETNRSL >Mature_138_residues TMAAPLPLARRAPRAAAHGFTMIEVLIALAIIAVALAASIRAVGTLASNAGALNDRLLASWSADNALGQLRLAHAWPDIG EQQFDCSQGNVALTCTERVSSTPNPTFRRVEVAVRKTGEASVLAQMVTVVANETNRSL
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14620; Mature: 14489
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMAAPLPLARRAPRAAAHGFTMIEVLIALAIIAVALAASIRAVGTLASNAGALNDRLLA CCCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC SWSADNALGQLRLAHAWPDIGEQQFDCSQGNVALTCTERVSSTPNPTFRRVEVAVRKTGE CCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCCCC ASVLAQMVTVVANETNRSL HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TMAAPLPLARRAPRAAAHGFTMIEVLIALAIIAVALAASIRAVGTLASNAGALNDRLLA CCCCCCCHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC SWSADNALGQLRLAHAWPDIGEQQFDCSQGNVALTCTERVSSTPNPTFRRVEVAVRKTGE CCCCCCHHHHEEHHHCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCHHHHHHHHHHCCCC ASVLAQMVTVVANETNRSL HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA