Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is hofH [C]

Identifier: 238025711

GI number: 238025711

Start: 32176

End: 32667

Strand: Reverse

Name: hofH [C]

Synonym: bglu_1g00330

Alternate gene names: 238025711

Gene position: 32667-32176 (Counterclockwise)

Preceding gene: 238025712

Following gene: 238025710

Centisome position: 0.84

GC content: 71.34

Gene sequence:

>492_bases
ATGCGAGCCCCCGGCACCACCGCGCTGCGTCATCCGCCCTCGCGGATGCGCGGCTTCACGCTGCTCGAGATGCTGGTGGT
GCTCGTGATCGCGGGAATCCTGGTCTCGGCGGCGACCCTGACGATGCACCGCAATCCGCGCACCGACCTGCGTGAAGAGG
CGCAGCGCGTGGCGCTGCTGCTCGAGAGCGCCGGCGACGAGGCGCAGGTGCGCGCGCGGCCGATCGCCTGGCAGCCGACC
GACCACGGCTTCCGTTTCGACATCCGCGGCGAGGACGGCTGGCACACGCTGCGCGACGACCTCTATCGCCCGCGTGACTG
GGACGGCGGCGTGACGGGCGCGTCGATCGACTATCCCGGCTCCGACACGCCGGCGACGCGGATCGTGTTCGGCACCGAAC
CGGTCGACGTGCCGGTGCGCATCACGCTCTATTCCGGGATCGGCAGCGTGACCATCGTCGGCACCGGCAACGGCCGCTAC
GAGGTGCGCTGA

Upstream 100 bases:

>100_bases
GACGCCAAGGAAGGCGGCGAGAACAACGACGCCGACATCGGCTCCTGGCAGTAGCCGTTCGCCCCGTCGCCTGCGATCCT
CCGCGCGCCTCACGCCCGAC

Downstream 100 bases:

>100_bases
CGATGGCCGCGCCGCTCCCCCTCGCACGCCGCGCGCCCCGGGCCGCCGCGCATGGCTTCACGATGATCGAGGTGCTGATC
GCGCTGGCGATCATCGCGGT

Product: general secretion pathway protein H

Products: NA

Alternate protein names: General Secretion Pathway Protein GspH; Type II Secretion Pathway Protein H; Type II Secretion System Protein; Type II Secretion System Protein G; Type II Secretory Pathway Pseudopilin PulG; General Secretory Pathway Protein H/U

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRAPGTTALRHPPSRMRGFTLLEMLVVLVIAGILVSAATLTMHRNPRTDLREEAQRVALLLESAGDEAQVRARPIAWQPT
DHGFRFDIRGEDGWHTLRDDLYRPRDWDGGVTGASIDYPGSDTPATRIVFGTEPVDVPVRITLYSGIGSVTIVGTGNGRY
EVR

Sequences:

>Translated_163_residues
MRAPGTTALRHPPSRMRGFTLLEMLVVLVIAGILVSAATLTMHRNPRTDLREEAQRVALLLESAGDEAQVRARPIAWQPT
DHGFRFDIRGEDGWHTLRDDLYRPRDWDGGVTGASIDYPGSDTPATRIVFGTEPVDVPVRITLYSGIGSVTIVGTGNGRY
EVR
>Mature_163_residues
MRAPGTTALRHPPSRMRGFTLLEMLVVLVIAGILVSAATLTMHRNPRTDLREEAQRVALLLESAGDEAQVRARPIAWQPT
DHGFRFDIRGEDGWHTLRDDLYRPRDWDGGVTGASIDYPGSDTPATRIVFGTEPVDVPVRITLYSGIGSVTIVGTGNGRY
EVR

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17965; Mature: 17965

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPGTTALRHPPSRMRGFTLLEMLVVLVIAGILVSAATLTMHRNPRTDLREEAQRVALL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
LESAGDEAQVRARPIAWQPTDHGFRFDIRGEDGWHTLRDDLYRPRDWDGGVTGASIDYPG
HHCCCCCCEEEECCEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCEECCCC
SDTPATRIVFGTEPVDVPVRITLYSGIGSVTIVGTGNGRYEVR
CCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCEEEEC
>Mature Secondary Structure
MRAPGTTALRHPPSRMRGFTLLEMLVVLVIAGILVSAATLTMHRNPRTDLREEAQRVALL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHH
LESAGDEAQVRARPIAWQPTDHGFRFDIRGEDGWHTLRDDLYRPRDWDGGVTGASIDYPG
HHCCCCCCEEEECCEEECCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCEECCCC
SDTPATRIVFGTEPVDVPVRITLYSGIGSVTIVGTGNGRYEVR
CCCCCEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA