| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is resE [H]
Identifier: 238025557
GI number: 238025557
Start: 2795699
End: 2797528
Strand: Direct
Name: resE [H]
Synonym: bglu_2g22540
Alternate gene names: 238025557
Gene position: 2795699-2797528 (Clockwise)
Preceding gene: 238025539
Following gene: 238025558
Centisome position: 98.88
GC content: 74.21
Gene sequence:
>1830_bases ATGACCGATCCGATCACGCTCACCGCACCCGACAATCCGCTGCATGTGCTCGTCGTCGACGATATCGGCGCGAGCCGCGC GGAAACCGCCTCGCAGGTCCGCGCGGCCGGCCACCACGTGATCGAGGCCGACAGCGGCCGCGCCGCGCTCGCCGTGGTGG AGACCACCGCCGTCGACCTCGTGCTGCTCGACCTGCTGATGCCCGACATGGACGGCTTCGAGGCCACGCGCCGCCTGCGC GCGAGCCACGAGCGCGCCTGGCTGCCGATCGTGGTGATGTCCTCGCTGCACGGCGCCGAGCATTTCGTGCGCGCCGTGGA GGAAGGTGCCGACGACTATCTCGTCAAGCCCGTGGACGGCGCGCTGCTGGCCGCGAAGATCCGCAACATCGGCCACGTGC TCGACCTGCAGTCGCGCGTGGCCAGTCTCGCGGCGCACAATCGCGAACTGTTCGACCACGTCGGCGACGCGGTGCTGACG ATCGAGGACGGCACGCGCATCTGCGACGCCAACGCGGCCGGCTATGCGCTGCTCGGCCTCGACGCGCTGCCCGCCGGCGG TGCGCCGCTCGACGCGCTGCTGCCCGCCGAGCTGTCCGAGCGGCTGCGCGCCGACACGCCGCCCGCCGCCTGCCAGGCGC TGGTGCGCGGCCCGTCGGGCGACACCTTTCCGGCCGACATCCGCATCAGCCGCTGGCGCAACAGCGCACTGCCGCGCGTG TCGCTGGTGATCCGCGATCTCACCGAGCAGCGCCGGCTGGACCGCCTCAAGGACGATTTCCTCAGCACCGTCAGCCACGA GCTGCGCACCCCGCTCACCTCGGTGAAGGGCGCCGTGGACCTGCTCGCGGGCGGCGCGGCCGGCGCGCTGCCCGCGCCGG CGCAGAAGCTGGTCGATATCGCGCGGCGCAACGGCGAGCGGCTCGGCCGGCTGATCGACGACGTGCTCGACGTCGCCAAG CTCGAGGCCGACCGCATGACGCTGCAGCGCCGCGCCTGCGGGCTGGACGGGCTGGTCGACGAGGCGCTCGCGGCCAACCT CGACTATGCGCGGCGGGTGGGCGTGCACCTCACGCGCGTCGGCGCGCGCTTCGATTGCGAGGTGTGGGTCGACCCCGACC GCTTCCTGCAGGTGATGGCGAACCTGCTGTCGAACGCCATCAAGAACTCGCCGGCCGGCAGCGCGGTGGAGGTCCGCGGC ACGCGCGACGGCGCGCGCGCGCGCATCGCCGTGCGCGACCACGGCGGCGGCATCCCGGAGGCGTTCCGCGCGCGCATCTT CGAAAAGTTCTCGCAGGCCGACGAGCGCGACCGCCGCGTCGGCACCGGCACCGGGCTCGGCCTGCACATCACGCAGGTGC TGGTCGAGCGCATGCACGGCGCGGTCGGGGTGGTATCCACGCCGGGCCACGGCGCCGAGTTCCACGTCGACCTGCCGACC GGCGACGCCGCGGCGGTGCTGCCGCCCACCCGGCCGACCGCGTTCGTGATCGATCCCGACGCGGCGGCGCGCGCGCGGAT CGCCGCCGCGCTCGCGCCCCGATTCACGCCGCTCACCGCGGCCGATCCCGAGGCCCTCGAGGCCGCCGCGATCACCGCGC CGGCGCTGGTGGTGGCCGATCCGTCGCGCGGGCGCGACGCCCCCGAGGCCGTGGCCCGCCGGCTGCGAGAAATCGCCGGC CCCGCGCCGATCCTGCTCTACACTGACGACGTTTCGGCCGCCGCCACGGCGATCGCGGCCGACCGGCTGCCCAAGCGCGG TACCGACGACGATGCGTTGCTGCGTGCCGCGCGGCGCATCGCCCATCCCGACGGAGGACCCCATCGATGA
Upstream 100 bases:
>100_bases TGCCGGGTCATCCACGCCTCGCCGCCCGGTGGCATAATCGGCTGGCCATGACTCCTCGCTGCGTGCCGCGTACCCAGCTG TGCCGGCATGCGCCGCCACG
Downstream 100 bases:
>100_bases GCACCACGCTGCACCGGGTGTTGTGCGCCGAGGACGACCCGGACATTCGGGCGATCCTCGAATTCAGTCTCGGCGTCGTC GGCGGCTACGACGTGCGGCT
Product: PAS/PAC sensor hybrid histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 609; Mature: 608
Protein sequence:
>609_residues MTDPITLTAPDNPLHVLVVDDIGASRAETASQVRAAGHHVIEADSGRAALAVVETTAVDLVLLDLLMPDMDGFEATRRLR ASHERAWLPIVVMSSLHGAEHFVRAVEEGADDYLVKPVDGALLAAKIRNIGHVLDLQSRVASLAAHNRELFDHVGDAVLT IEDGTRICDANAAGYALLGLDALPAGGAPLDALLPAELSERLRADTPPAACQALVRGPSGDTFPADIRISRWRNSALPRV SLVIRDLTEQRRLDRLKDDFLSTVSHELRTPLTSVKGAVDLLAGGAAGALPAPAQKLVDIARRNGERLGRLIDDVLDVAK LEADRMTLQRRACGLDGLVDEALAANLDYARRVGVHLTRVGARFDCEVWVDPDRFLQVMANLLSNAIKNSPAGSAVEVRG TRDGARARIAVRDHGGGIPEAFRARIFEKFSQADERDRRVGTGTGLGLHITQVLVERMHGAVGVVSTPGHGAEFHVDLPT GDAAAVLPPTRPTAFVIDPDAAARARIAAALAPRFTPLTAADPEALEAAAITAPALVVADPSRGRDAPEAVARRLREIAG PAPILLYTDDVSAAATAIAADRLPKRGTDDDALLRAARRIAHPDGGPHR
Sequences:
>Translated_609_residues MTDPITLTAPDNPLHVLVVDDIGASRAETASQVRAAGHHVIEADSGRAALAVVETTAVDLVLLDLLMPDMDGFEATRRLR ASHERAWLPIVVMSSLHGAEHFVRAVEEGADDYLVKPVDGALLAAKIRNIGHVLDLQSRVASLAAHNRELFDHVGDAVLT IEDGTRICDANAAGYALLGLDALPAGGAPLDALLPAELSERLRADTPPAACQALVRGPSGDTFPADIRISRWRNSALPRV SLVIRDLTEQRRLDRLKDDFLSTVSHELRTPLTSVKGAVDLLAGGAAGALPAPAQKLVDIARRNGERLGRLIDDVLDVAK LEADRMTLQRRACGLDGLVDEALAANLDYARRVGVHLTRVGARFDCEVWVDPDRFLQVMANLLSNAIKNSPAGSAVEVRG TRDGARARIAVRDHGGGIPEAFRARIFEKFSQADERDRRVGTGTGLGLHITQVLVERMHGAVGVVSTPGHGAEFHVDLPT GDAAAVLPPTRPTAFVIDPDAAARARIAAALAPRFTPLTAADPEALEAAAITAPALVVADPSRGRDAPEAVARRLREIAG PAPILLYTDDVSAAATAIAADRLPKRGTDDDALLRAARRIAHPDGGPHR >Mature_608_residues TDPITLTAPDNPLHVLVVDDIGASRAETASQVRAAGHHVIEADSGRAALAVVETTAVDLVLLDLLMPDMDGFEATRRLRA SHERAWLPIVVMSSLHGAEHFVRAVEEGADDYLVKPVDGALLAAKIRNIGHVLDLQSRVASLAAHNRELFDHVGDAVLTI EDGTRICDANAAGYALLGLDALPAGGAPLDALLPAELSERLRADTPPAACQALVRGPSGDTFPADIRISRWRNSALPRVS LVIRDLTEQRRLDRLKDDFLSTVSHELRTPLTSVKGAVDLLAGGAAGALPAPAQKLVDIARRNGERLGRLIDDVLDVAKL EADRMTLQRRACGLDGLVDEALAANLDYARRVGVHLTRVGARFDCEVWVDPDRFLQVMANLLSNAIKNSPAGSAVEVRGT RDGARARIAVRDHGGGIPEAFRARIFEKFSQADERDRRVGTGTGLGLHITQVLVERMHGAVGVVSTPGHGAEFHVDLPTG DAAAVLPPTRPTAFVIDPDAAARARIAAALAPRFTPLTAADPEALEAAAITAPALVVADPSRGRDAPEAVARRLREIAGP APILLYTDDVSAAATAIAADRLPKRGTDDDALLRAARRIAHPDGGPHR
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=228, Percent_Identity=37.280701754386, Blast_Score=119, Evalue=6e-28, Organism=Escherichia coli, GI1789149, Length=243, Percent_Identity=35.3909465020576, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788713, Length=256, Percent_Identity=31.25, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI87082128, Length=229, Percent_Identity=31.0043668122271, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI48994928, Length=247, Percent_Identity=31.5789473684211, Blast_Score=98, Evalue=2e-21, Organism=Escherichia coli, GI87081816, Length=253, Percent_Identity=32.4110671936759, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1786600, Length=332, Percent_Identity=28.0120481927711, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=29.8165137614679, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI1786912, Length=253, Percent_Identity=28.0632411067194, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1786783, Length=242, Percent_Identity=26.4462809917355, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788549, Length=359, Percent_Identity=23.1197771587744, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788393, Length=226, Percent_Identity=24.7787610619469, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1790300, Length=357, Percent_Identity=26.890756302521, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786784, Length=135, Percent_Identity=32.5925925925926, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1790346, Length=241, Percent_Identity=28.6307053941909, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1790861, Length=194, Percent_Identity=26.2886597938144, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790437, Length=109, Percent_Identity=36.697247706422, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1787229, Length=124, Percent_Identity=30.6451612903226, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=32.2314049586777, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1788550, Length=104, Percent_Identity=33.6538461538462, Blast_Score=63, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 64616; Mature: 64485
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPITLTAPDNPLHVLVVDDIGASRAETASQVRAAGHHVIEADSGRAALAVVETTAVDL CCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHH VLLDLLMPDMDGFEATRRLRASHERAWLPIVVMSSLHGAEHFVRAVEEGADDYLVKPVDG HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCC ALLAAKIRNIGHVLDLQSRVASLAAHNRELFDHVGDAVLTIEDGTRICDANAAGYALLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCEEEEEC DALPAGGAPLDALLPAELSERLRADTPPAACQALVRGPSGDTFPADIRISRWRNSALPRV CCCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHCCCCCCHH SLVIRDLTEQRRLDRLKDDFLSTVSHELRTPLTSVKGAVDLLAGGAAGALPAPAQKLVDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ARRNGERLGRLIDDVLDVAKLEADRMTLQRRACGLDGLVDEALAANLDYARRVGVHLTRV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCEEEEE GARFDCEVWVDPDRFLQVMANLLSNAIKNSPAGSAVEVRGTRDGARARIAVRDHGGGIPE CCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHH AFRARIFEKFSQADERDRRVGTGTGLGLHITQVLVERMHGAVGVVSTPGHGAEFHVDLPT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCC GDAAAVLPPTRPTAFVIDPDAAARARIAAALAPRFTPLTAADPEALEAAAITAPALVVAD CCCEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEC PSRGRDAPEAVARRLREIAGPAPILLYTDDVSAAATAIAADRLPKRGTDDDALLRAARRI CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AHPDGGPHR CCCCCCCCC >Mature Secondary Structure TDPITLTAPDNPLHVLVVDDIGASRAETASQVRAAGHHVIEADSGRAALAVVETTAVDL CCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHH VLLDLLMPDMDGFEATRRLRASHERAWLPIVVMSSLHGAEHFVRAVEEGADDYLVKPVDG HHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCEECCCCC ALLAAKIRNIGHVLDLQSRVASLAAHNRELFDHVGDAVLTIEDGTRICDANAAGYALLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCEEEEEC DALPAGGAPLDALLPAELSERLRADTPPAACQALVRGPSGDTFPADIRISRWRNSALPRV CCCCCCCCCHHHHCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEHHCCCCCCHH SLVIRDLTEQRRLDRLKDDFLSTVSHELRTPLTSVKGAVDLLAGGAAGALPAPAQKLVDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ARRNGERLGRLIDDVLDVAKLEADRMTLQRRACGLDGLVDEALAANLDYARRVGVHLTRV HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHCCEEEEE GARFDCEVWVDPDRFLQVMANLLSNAIKNSPAGSAVEVRGTRDGARARIAVRDHGGGIPE CCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCHH AFRARIFEKFSQADERDRRVGTGTGLGLHITQVLVERMHGAVGVVSTPGHGAEFHVDLPT HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCC GDAAAVLPPTRPTAFVIDPDAAARARIAAALAPRFTPLTAADPEALEAAAITAPALVVAD CCCEEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEEC PSRGRDAPEAVARRLREIAGPAPILLYTDDVSAAATAIAADRLPKRGTDDDALLRAARRI CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH AHPDGGPHR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]