| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is phoP [H]
Identifier: 238025558
GI number: 238025558
Start: 2797525
End: 2797935
Strand: Direct
Name: phoP [H]
Synonym: bglu_2g22550
Alternate gene names: 238025558
Gene position: 2797525-2797935 (Clockwise)
Preceding gene: 238025557
Following gene: 238025559
Centisome position: 98.95
GC content: 68.37
Gene sequence:
>411_bases ATGAGCACCACGCTGCACCGGGTGTTGTGCGCCGAGGACGACCCGGACATTCGGGCGATCCTCGAATTCAGTCTCGGCGT CGTCGGCGGCTACGACGTGCGGCTCTGCCCCGACGGCACCGACGCGCTGGCCGAGGCGGACGCGTTCGCGCCCGACCTGA TCCTGCTCGACGTGATGATGCCGACGCTGAGCGGGCCCGACACGATGCGCGCGCTGCGCGAGAAGCCGGCGCTGCGCGAC ACGCCGATCGTGCTGATGTCGGCGCGCGCGCTGCCCGACGAGATCGAGGCGCTGCTCGAGCACGGCGCCACCGGCGTGAT CGTCAAGCCGTTCGACCCGATGACGCTGCCCGAACATCTGAAGATTTACTGGGACTACGCCCGTGATAAACGCGCCGGAC TCTCTTCCTGA
Upstream 100 bases:
>100_bases CGGCGATCGCGGCCGACCGGCTGCCCAAGCGCGGTACCGACGACGATGCGTTGCTGCGTGCCGCGCGGCGCATCGCCCAT CCCGACGGAGGACCCCATCG
Downstream 100 bases:
>100_bases TTTCGAACGCCAGCTCGCGGTGCTGCGGGCCCGCTTCACCGCCGGGCTCGCCGCGCGGCGCGACGAACTCGACGCCGCGT GGGCCGAATGGAACGCGCTG
Product: response regulator receiver
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSTTLHRVLCAEDDPDIRAILEFSLGVVGGYDVRLCPDGTDALAEADAFAPDLILLDVMMPTLSGPDTMRALREKPALRD TPIVLMSARALPDEIEALLEHGATGVIVKPFDPMTLPEHLKIYWDYARDKRAGLSS
Sequences:
>Translated_136_residues MSTTLHRVLCAEDDPDIRAILEFSLGVVGGYDVRLCPDGTDALAEADAFAPDLILLDVMMPTLSGPDTMRALREKPALRD TPIVLMSARALPDEIEALLEHGATGVIVKPFDPMTLPEHLKIYWDYARDKRAGLSS >Mature_135_residues STTLHRVLCAEDDPDIRAILEFSLGVVGGYDVRLCPDGTDALAEADAFAPDLILLDVMMPTLSGPDTMRALREKPALRDT PIVLMSARALPDEIEALLEHGATGVIVKPFDPMTLPEHLKIYWDYARDKRAGLSS
Specific function: Member of the two-component regulatory system phoP/phoR involved in the regulation of alkaline phosphatase genes phoA and phoB and of phosphodiesterase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=31.3559322033898, Blast_Score=63, Evalue=6e-12, Organism=Escherichia coli, GI1786599, Length=115, Percent_Identity=35.6521739130435, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR016032 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 14875; Mature: 14744
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTLHRVLCAEDDPDIRAILEFSLGVVGGYDVRLCPDGTDALAEADAFAPDLILLDVMM CCCCHHHEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHH PTLSGPDTMRALREKPALRDTPIVLMSARALPDEIEALLEHGATGVIVKPFDPMTLPEHL HCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHH KIYWDYARDKRAGLSS EEEEECCCCCCCCCCC >Mature Secondary Structure STTLHRVLCAEDDPDIRAILEFSLGVVGGYDVRLCPDGTDALAEADAFAPDLILLDVMM CCCHHHEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCCCHHHHHHHHH PTLSGPDTMRALREKPALRDTPIVLMSARALPDEIEALLEHGATGVIVKPFDPMTLPEHL HCCCCHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCCCCCHH KIYWDYARDKRAGLSS EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1454550; 3036763; 9387221; 9384377; 8045898; 3142862 [H]