| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238025343
Identifier: 238025343
GI number: 238025343
Start: 2507945
End: 2508784
Strand: Direct
Name: 238025343
Synonym: bglu_2g20190
Alternate gene names: NA
Gene position: 2507945-2508784 (Clockwise)
Preceding gene: 238025342
Following gene: 238025344
Centisome position: 88.7
GC content: 67.98
Gene sequence:
>840_bases ATGAGCTATCAGACCATTCTGGTCCATCTGGACAGCAGCGCCCGAGCCCATGCACGGCTGGATATCGCGCTGCGTCTGGC AAGCCAGTTCGATGCCTGGGTGGTTGCGCTCTACGCGGTATACACGCCGGACCCCGACATGTTCACCGTGATGGCGGGCT CCGCGGAGTATTACATCGAGCGCGCGCACGAACGAAAGGAACGGCGCGACGCGCTCAAGCGCCTTTTCCACGCCGAGTTG AACCGCGCCCACGTGGAGGGCGCATGGATCGACGCCACCGACTCCGCCAACCGCAGCGTGGTGAACCACGCCCATTACGC CGATCTCGTGATCGCGGGCCAGGATGACCCGCAAGATCCCGAAACCTTCGTCGACAGCCGCTTTCCGGAAACCGTGGTGA TGTCCGCCGGCCGCCCGGTCCTGCTGATTCCCTTTCGTGGCGAGTTCACGACCCTCGGCAAGCGCGTGCTGGTTGCCTGG GACGGCGGCCGCGAAGCGACCCGTGCCGCGCACGACGCGCTGCCCTTTCTCGAGCGCGCGCAGCAGACCCTGCTCGTCAC CGTCAACGGCCCCGCCGACGAGCCGGCCGCCTCGCTGATGCCCGGTGCCGACATCGCCTGCGCCCTGGCACGCCACGGCG CACGCGTGGAGGCGCGGGAACTCGCGTGCGAGCGCCCGGCGTCGATCGGCGACGTCTTGCTGTCGCAGGCGAGCGAGGTC GGCGCCGACCTGCTGGTGATGGGCGCCTATGGTCATGCGCGGTGGCGCGAACTCGTGCTCGGCGGCACCACGCGCACCGT TTTCGCGTCCATGACGCTGCCGGTGCTGATATCGCATTGA
Upstream 100 bases:
>100_bases TGGCGCAGCCGGCGATTGACCTGAGTCAATCGCGGAGCGCCGCCGCCTCCTAGACTGGGCCGCATGAACCGCCGTCCACG CCGCTCGGGGAGCCGTCGCA
Downstream 100 bases:
>100_bases GCGGCGCGCGCAGGCCAGCGCCGCTTCCTTGCCCGGCTGACGGGCGGCACTCGGGAGAGCAGCATGTTTTCACGCATACT CGTCGCGCTCGACGGCAGTC
Product: UspA domain-containing protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSYQTILVHLDSSARAHARLDIALRLASQFDAWVVALYAVYTPDPDMFTVMAGSAEYYIERAHERKERRDALKRLFHAEL NRAHVEGAWIDATDSANRSVVNHAHYADLVIAGQDDPQDPETFVDSRFPETVVMSAGRPVLLIPFRGEFTTLGKRVLVAW DGGREATRAAHDALPFLERAQQTLLVTVNGPADEPAASLMPGADIACALARHGARVEARELACERPASIGDVLLSQASEV GADLLVMGAYGHARWRELVLGGTTRTVFASMTLPVLISH
Sequences:
>Translated_279_residues MSYQTILVHLDSSARAHARLDIALRLASQFDAWVVALYAVYTPDPDMFTVMAGSAEYYIERAHERKERRDALKRLFHAEL NRAHVEGAWIDATDSANRSVVNHAHYADLVIAGQDDPQDPETFVDSRFPETVVMSAGRPVLLIPFRGEFTTLGKRVLVAW DGGREATRAAHDALPFLERAQQTLLVTVNGPADEPAASLMPGADIACALARHGARVEARELACERPASIGDVLLSQASEV GADLLVMGAYGHARWRELVLGGTTRTVFASMTLPVLISH >Mature_278_residues SYQTILVHLDSSARAHARLDIALRLASQFDAWVVALYAVYTPDPDMFTVMAGSAEYYIERAHERKERRDALKRLFHAELN RAHVEGAWIDATDSANRSVVNHAHYADLVIAGQDDPQDPETFVDSRFPETVVMSAGRPVLLIPFRGEFTTLGKRVLVAWD GGREATRAAHDALPFLERAQQTLLVTVNGPADEPAASLMPGADIACALARHGARVEARELACERPASIGDVLLSQASEVG ADLLVMGAYGHARWRELVLGGTTRTVFASMTLPVLISH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30522; Mature: 30391
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQTILVHLDSSARAHARLDIALRLASQFDAWVVALYAVYTPDPDMFTVMAGSAEYYIE CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEECCHHHHHH RAHERKERRDALKRLFHAELNRAHVEGAWIDATDSANRSVVNHAHYADLVIAGQDDPQDP HHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCHHHHCCCEEEEEEECCCCCCCH ETFVDSRFPETVVMSAGRPVLLIPFRGEFTTLGKRVLVAWDGGREATRAAHDALPFLERA HHHHHCCCCCCEEECCCCCEEEEEECCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHC QQTLLVTVNGPADEPAASLMPGADIACALARHGARVEARELACERPASIGDVLLSQASEV CEEEEEEECCCCCCCHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHC GADLLVMGAYGHARWRELVLGGTTRTVFASMTLPVLISH CCCEEEEECCCCHHHHHHHCCCCHHHEEEHCCEEEEECC >Mature Secondary Structure SYQTILVHLDSSARAHARLDIALRLASQFDAWVVALYAVYTPDPDMFTVMAGSAEYYIE CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEEECCHHHHHH RAHERKERRDALKRLFHAELNRAHVEGAWIDATDSANRSVVNHAHYADLVIAGQDDPQDP HHHHHHHHHHHHHHHHHHHHHHHEECCEEEECCCCCCCHHHHCCCEEEEEEECCCCCCCH ETFVDSRFPETVVMSAGRPVLLIPFRGEFTTLGKRVLVAWDGGREATRAAHDALPFLERA HHHHHCCCCCCEEECCCCCEEEEEECCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHC QQTLLVTVNGPADEPAASLMPGADIACALARHGARVEARELACERPASIGDVLLSQASEV CEEEEEEECCCCCCCHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHC GADLLVMGAYGHARWRELVLGGTTRTVFASMTLPVLISH CCCEEEEECCCCHHHHHHHCCCCHHHEEEHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA