| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yxiE [H]
Identifier: 238025344
GI number: 238025344
Start: 2508848
End: 2509408
Strand: Direct
Name: yxiE [H]
Synonym: bglu_2g20200
Alternate gene names: 238025344
Gene position: 2508848-2509408 (Clockwise)
Preceding gene: 238025343
Following gene: 238025345
Centisome position: 88.74
GC content: 72.01
Gene sequence:
>561_bases ATGTTTTCACGCATACTCGTCGCGCTCGACGGCAGTCGGACCGCTTGGCACGCGCTCGACGCCGCGCTCGCGATTGCGGC GGAACACGCGGCGACGCTCGATACGCTGTACGTGATCGATTTTCCAGTGGCCGCGCTCGATCTATCAGGCGCCTACCTCT CGAACTTCCTCGACGCGGCACGCGAGCAGGGGCGGCAGCTTTGCACCGATGCCGCGGGGCGGATGGCGTCCCGCGACGTG AAGGGCACGCAGCGCGTGGTCGAAGCCGGATCGATCGGCGAGGACGTCGCCGACACCATCGCGCGCGCGGCCCGCGCCTG GCCGGCCGACCTGCTGGTGATGGGCACCCACGGGCGGCGCGGCTGGCGGCACCTGATGCTCGGCAGCGTGGCGGAACGCA CGCTGCGGCTCGCGACCTGCCCCGTGCTGCTGATCCCGACCCACACGAGCCTCGCCCAACCCGGCGAGGCGCCGGCCGAC CCGGCTGAAGCGGCTGGCTCGTCCCACCGCGCCGCGCCGCCGGCCGCCGACCTCCCCGATACCGCAAAGGCTTCCTCATG A
Upstream 100 bases:
>100_bases CGCGTCCATGACGCTGCCGGTGCTGATATCGCATTGAGCGGCGCGCGCAGGCCAGCGCCGCTTCCTTGCCCGGCTGACGG GCGGCACTCGGGAGAGCAGC
Downstream 100 bases:
>100_bases AATACAAGACCGTGCTGGTTCACCTCGACGACAGCGCGCCCTGCGAGGTACGTCTGGCATGCGCCGTCGAACTGGCGCAG CGCCACGACGCGCACTTGAG
Product: UspA domain-containing protein
Products: NA
Alternate protein names: USP YxiE [H]
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MFSRILVALDGSRTAWHALDAALAIAAEHAATLDTLYVIDFPVAALDLSGAYLSNFLDAAREQGRQLCTDAAGRMASRDV KGTQRVVEAGSIGEDVADTIARAARAWPADLLVMGTHGRRGWRHLMLGSVAERTLRLATCPVLLIPTHTSLAQPGEAPAD PAEAAGSSHRAAPPAADLPDTAKASS
Sequences:
>Translated_186_residues MFSRILVALDGSRTAWHALDAALAIAAEHAATLDTLYVIDFPVAALDLSGAYLSNFLDAAREQGRQLCTDAAGRMASRDV KGTQRVVEAGSIGEDVADTIARAARAWPADLLVMGTHGRRGWRHLMLGSVAERTLRLATCPVLLIPTHTSLAQPGEAPAD PAEAAGSSHRAAPPAADLPDTAKASS >Mature_186_residues MFSRILVALDGSRTAWHALDAALAIAAEHAATLDTLYVIDFPVAALDLSGAYLSNFLDAAREQGRQLCTDAAGRMASRDV KGTQRVVEAGSIGEDVADTIARAARAWPADLLVMGTHGRRGWRHLMLGSVAERTLRLATCPVLLIPTHTSLAQPGEAPAD PAEAAGSSHRAAPPAADLPDTAKASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 19429; Mature: 19429
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSRILVALDGSRTAWHALDAALAIAAEHAATLDTLYVIDFPVAALDLSGAYLSNFLDAA CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCHHHHHHHHHHH REQGRQLCTDAAGRMASRDVKGTQRVVEAGSIGEDVADTIARAARAWPADLLVMGTHGRR HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC GWRHLMLGSVAERTLRLATCPVLLIPTHTSLAQPGEAPADPAEAAGSSHRAAPPAADLPD HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TAKASS CCCCCC >Mature Secondary Structure MFSRILVALDGSRTAWHALDAALAIAAEHAATLDTLYVIDFPVAALDLSGAYLSNFLDAA CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHCCHHHHHHHHHHH REQGRQLCTDAAGRMASRDVKGTQRVVEAGSIGEDVADTIARAARAWPADLLVMGTHGRR HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCC GWRHLMLGSVAERTLRLATCPVLLIPTHTSLAQPGEAPADPAEAAGSSHRAAPPAADLPD HHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC TAKASS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377 [H]