| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is plcN [H]
Identifier: 238025323
GI number: 238025323
Start: 2483034
End: 2485223
Strand: Direct
Name: plcN [H]
Synonym: bglu_2g19970
Alternate gene names: 238025323
Gene position: 2483034-2485223 (Clockwise)
Preceding gene: 238025322
Following gene: 238025324
Centisome position: 87.82
GC content: 66.85
Gene sequence:
>2190_bases ATGTCTACCTACAATCGACGACGCTTCCTGCAGACCGCCGCCTCGACGGCCGGCGCGGCAGCAGCCCTGACGGTGTTCCC CGATGCCATCCGCAAGGCGCTCGCCATTCCGGCGGCGTCGGGCACGGGCTCGATCCGGGACGTGCAGCACATCGTGGTGC TGATGCAGGAAAACCGCTCGTTCGACCATTACTTCGGCCACCTGCGCGGCGTGCGCGGCTACAACGACCGCTTCCCGATC CCGCTGGCCAGCGGCCGGCCGGTCTGGTTCCAGCCATCCAAGGCCGATCCGGCCACGCCGGTGCTGCCGTTCCGCTACGA CGTCAACAAGGTCAGCGAATGCCTGGGCGACCTGGACCACAGCTGGTACCCGACCCACCACGCGATCAACAACGGCCGCA TGGACGCCTGGCCGGCCAACAAGTCCGACCTGACGATGGGCTACCACGTGCGCGAGGACATCCCGTTCCATTACGCGCTG GCCGATGCGTTCACGATCTGCGATCACTACTTCTGCTCGATGCCGGGGCCGACCCACCCGAACCGCACCTATCTGATGAC CGGCATGGTGGACCCGACCGGCAAGCAGGGCGGCCCGCTGCTGGACAACAACGACGCCATCGACGACGACCTGCCGCCGA AGTGGGATCTGCTGACCTGGACCACCTACCCGGAGCGGCTGCAGGCGGCCGGCATCTCGTGGCAGCTCTACCAGCAGGGC GTAAACGGCAACGACCCGGTGAACGGCAACTACGGCACCAACATGCTGCCGAACTTCGCCAACTTCATCAACGCGCCGGC CGGCTCGGCGCTGCAAACGCGCGGCAACGCCGTGCGCACCCTGGCCGACCTCAAGAACGACGTGCTGGCCAACCAGCTGC CGCAGGTCTGCTGGCTGTGCCCGCCGGCGATCTACTCCGAGCACCCGCGCTATACGCCCGCCTATGGCGCGACCTATATT GCCCAGATCCTCGACGCGCTGACCTCGAACCCGGCGGTGTGGAGCAAAACCGTCTTCTTTCTGATGTACGACGAGAACGA CGGCTTCTTCGACCACCTCGCCCCGCCGCAACCGCCCACCCATCGCGGCCAGGGCCTGTCGACCGTGGACGTCAGCGCCG AGATCCACAACGTGGTGAACCCGCGGCGCGGCGGCAGCTACACGGCCGACAACCTGCCCTACGGCATGGGTCCGCGCGTG CCGATGATCGTGATCTCGCCATGGACCAAGGGCGGCTACGTGAACTCGCAGGTCTTCGACCACACCTCGGTGATCCGCTT CATGGAGCAGCGCTTCGGCGTGATGGAGCCCAACATCAGCCCGTGGCGCCGCGCCGTCTCGGGCGACCTGCTGAGCTGCT TCGACTTCGGCACGCCGGACGCGGCCTTCCCGGTACTGCCCGATACCAGCAACTACCAGGCGAAATCCGACGCGTCCTGC CAGAACCCGAAGGCGGCGGTGCCCGCGGTGCCGAGCCCCGCCTCGATCAAGGAGCAGGAAGCCGGCGTGCGTGCCGCGCG CGCCCTGCCCTACGAACTGCACGCCAACGGCCGCGAAGCGATCAAGGAAAACGAATTCCAGATCCACTTCTCGAACACGG GCAAGGTGGGCGCGTGCTTCTACGTGTACTCGACCAACCGCAGCGACGGCCCATGGCGCTACACGGTGGAAGCCGGCAAG TCGATCGCCGACACCTTCAATCTGGCCGGCACGGGTGGCGTCTACAACTTCCTGGTCTATGGCCCGAACGGTTTCGTGCG CCATTTCGTGGGTGCCATCCCGCAGGACCAGAAGACCCGGCACAGGTCGGCCAGGCCGACGGTGGTGGTGGGCTACGACG CCGCCAACGGCAACGTCATGCTGAAGATCAGCAACAAGGGCGGCAAGGCCGTGAAGCTGTCCGTCACGGATAACGCCTAC GGGGCGCAGACGCGCCGCTTCTCGATCCCGTCGGAAGGATTCGTCGAGGAAGTCTGGACGCTCAGGCACAGCCACCAATG GTACGACCTGACGGTGTCCGACGGCGCGGCCTTCGCCTGGCGCGCCGCCGGCCACGTGGAGAACGGCAGGAGCAGCTTCA GCGATCCGGCCGCCACGCAGGTGGTGACCGAGCTGTCGAGCTCGATCGTCACCTCGCCCACGGCGATCGCGCTGCAGGAC CCGGCCCTGCCGGACATGCCGACGGTCTGA
Upstream 100 bases:
>100_bases CGGCGGATTCCAGCAACTGACCGGCAAGCAGTCCTCGGCAGTCCGCCAATAGAAAGCCGCCCACCCACGTTTCACCGTAT CTCTCACGAGAGGCCCGACC
Downstream 100 bases:
>100_bases GCGGCCGCGTCCCGCCGCAAGGGGGCTGGGAGGCCGGCGACTCGCGCCTGCCGGCCCCGCACGCGGGCCCGGGCTGTTTG CCGGCCGAATCCGGCGCCAT
Product: Non-hemolytic phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MSTYNRRRFLQTAASTAGAAAALTVFPDAIRKALAIPAASGTGSIRDVQHIVVLMQENRSFDHYFGHLRGVRGYNDRFPI PLASGRPVWFQPSKADPATPVLPFRYDVNKVSECLGDLDHSWYPTHHAINNGRMDAWPANKSDLTMGYHVREDIPFHYAL ADAFTICDHYFCSMPGPTHPNRTYLMTGMVDPTGKQGGPLLDNNDAIDDDLPPKWDLLTWTTYPERLQAAGISWQLYQQG VNGNDPVNGNYGTNMLPNFANFINAPAGSALQTRGNAVRTLADLKNDVLANQLPQVCWLCPPAIYSEHPRYTPAYGATYI AQILDALTSNPAVWSKTVFFLMYDENDGFFDHLAPPQPPTHRGQGLSTVDVSAEIHNVVNPRRGGSYTADNLPYGMGPRV PMIVISPWTKGGYVNSQVFDHTSVIRFMEQRFGVMEPNISPWRRAVSGDLLSCFDFGTPDAAFPVLPDTSNYQAKSDASC QNPKAAVPAVPSPASIKEQEAGVRAARALPYELHANGREAIKENEFQIHFSNTGKVGACFYVYSTNRSDGPWRYTVEAGK SIADTFNLAGTGGVYNFLVYGPNGFVRHFVGAIPQDQKTRHRSARPTVVVGYDAANGNVMLKISNKGGKAVKLSVTDNAY GAQTRRFSIPSEGFVEEVWTLRHSHQWYDLTVSDGAAFAWRAAGHVENGRSSFSDPAATQVVTELSSSIVTSPTAIALQD PALPDMPTV
Sequences:
>Translated_729_residues MSTYNRRRFLQTAASTAGAAAALTVFPDAIRKALAIPAASGTGSIRDVQHIVVLMQENRSFDHYFGHLRGVRGYNDRFPI PLASGRPVWFQPSKADPATPVLPFRYDVNKVSECLGDLDHSWYPTHHAINNGRMDAWPANKSDLTMGYHVREDIPFHYAL ADAFTICDHYFCSMPGPTHPNRTYLMTGMVDPTGKQGGPLLDNNDAIDDDLPPKWDLLTWTTYPERLQAAGISWQLYQQG VNGNDPVNGNYGTNMLPNFANFINAPAGSALQTRGNAVRTLADLKNDVLANQLPQVCWLCPPAIYSEHPRYTPAYGATYI AQILDALTSNPAVWSKTVFFLMYDENDGFFDHLAPPQPPTHRGQGLSTVDVSAEIHNVVNPRRGGSYTADNLPYGMGPRV PMIVISPWTKGGYVNSQVFDHTSVIRFMEQRFGVMEPNISPWRRAVSGDLLSCFDFGTPDAAFPVLPDTSNYQAKSDASC QNPKAAVPAVPSPASIKEQEAGVRAARALPYELHANGREAIKENEFQIHFSNTGKVGACFYVYSTNRSDGPWRYTVEAGK SIADTFNLAGTGGVYNFLVYGPNGFVRHFVGAIPQDQKTRHRSARPTVVVGYDAANGNVMLKISNKGGKAVKLSVTDNAY GAQTRRFSIPSEGFVEEVWTLRHSHQWYDLTVSDGAAFAWRAAGHVENGRSSFSDPAATQVVTELSSSIVTSPTAIALQD PALPDMPTV >Mature_728_residues STYNRRRFLQTAASTAGAAAALTVFPDAIRKALAIPAASGTGSIRDVQHIVVLMQENRSFDHYFGHLRGVRGYNDRFPIP LASGRPVWFQPSKADPATPVLPFRYDVNKVSECLGDLDHSWYPTHHAINNGRMDAWPANKSDLTMGYHVREDIPFHYALA DAFTICDHYFCSMPGPTHPNRTYLMTGMVDPTGKQGGPLLDNNDAIDDDLPPKWDLLTWTTYPERLQAAGISWQLYQQGV NGNDPVNGNYGTNMLPNFANFINAPAGSALQTRGNAVRTLADLKNDVLANQLPQVCWLCPPAIYSEHPRYTPAYGATYIA QILDALTSNPAVWSKTVFFLMYDENDGFFDHLAPPQPPTHRGQGLSTVDVSAEIHNVVNPRRGGSYTADNLPYGMGPRVP MIVISPWTKGGYVNSQVFDHTSVIRFMEQRFGVMEPNISPWRRAVSGDLLSCFDFGTPDAAFPVLPDTSNYQAKSDASCQ NPKAAVPAVPSPASIKEQEAGVRAARALPYELHANGREAIKENEFQIHFSNTGKVGACFYVYSTNRSDGPWRYTVEAGKS IADTFNLAGTGGVYNFLVYGPNGFVRHFVGAIPQDQKTRHRSARPTVVVGYDAANGNVMLKISNKGGKAVKLSVTDNAYG AQTRRFSIPSEGFVEEVWTLRHSHQWYDLTVSDGAAFAWRAAGHVENGRSSFSDPAATQVVTELSSSIVTSPTAIALQDP ALPDMPTV
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 79928; Mature: 79797
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYNRRRFLQTAASTAGAAAALTVFPDAIRKALAIPAASGTGSIRDVQHIVVLMQENRS CCCHHHHHHHHHHHHCCCCCEEEHHCHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCC FDHYFGHLRGVRGYNDRFPIPLASGRPVWFQPSKADPATPVLPFRYDVNKVSECLGDLDH HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHHHCCC SWYPTHHAINNGRMDAWPANKSDLTMGYHVREDIPFHYALADAFTICDHYFCSMPGPTHP CCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCC NRTYLMTGMVDPTGKQGGPLLDNNDAIDDDLPPKWDLLTWTTYPERLQAAGISWQLYQQG CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEHHHCC VNGNDPVNGNYGTNMLPNFANFINAPAGSALQTRGNAVRTLADLKNDVLANQLPQVCWLC CCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC PPAIYSEHPRYTPAYGATYIAQILDALTSNPAVWSKTVFFLMYDENDGFFDHLAPPQPPT CHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHCCCCCCCCC HRGQGLSTVDVSAEIHNVVNPRRGGSYTADNLPYGMGPRVPMIVISPWTKGGYVNSQVFD CCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH HTSVIRFMEQRFGVMEPNISPWRRAVSGDLLSCFDFGTPDAAFPVLPDTSNYQAKSDASC HHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC QNPKAAVPAVPSPASIKEQEAGVRAARALPYELHANGREAIKENEFQIHFSNTGKVGACF CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHCCCCEEEEECCCCCEEEEE YVYSTNRSDGPWRYTVEAGKSIADTFNLAGTGGVYNFLVYGPNGFVRHFVGAIPQDQKTR EEEECCCCCCCEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCHHHH HRSARPTVVVGYDAANGNVMLKISNKGGKAVKLSVTDNAYGAQTRRFSIPSEGFVEEVWT HCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHH LRHSHQWYDLTVSDGAAFAWRAAGHVENGRSSFSDPAATQVVTELSSSIVTSPTAIALQD HHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC PALPDMPTV CCCCCCCCC >Mature Secondary Structure STYNRRRFLQTAASTAGAAAALTVFPDAIRKALAIPAASGTGSIRDVQHIVVLMQENRS CCHHHHHHHHHHHHCCCCCEEEHHCHHHHHHHHCCCCCCCCCCHHHHEEEEEEEECCCC FDHYFGHLRGVRGYNDRFPIPLASGRPVWFQPSKADPATPVLPFRYDVNKVSECLGDLDH HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEECHHHHHHHHHHCCC SWYPTHHAINNGRMDAWPANKSDLTMGYHVREDIPFHYALADAFTICDHYFCSMPGPTHP CCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHCCCCCCCCC NRTYLMTGMVDPTGKQGGPLLDNNDAIDDDLPPKWDLLTWTTYPERLQAAGISWQLYQQG CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCEEEHHHCC VNGNDPVNGNYGTNMLPNFANFINAPAGSALQTRGNAVRTLADLKNDVLANQLPQVCWLC CCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC PPAIYSEHPRYTPAYGATYIAQILDALTSNPAVWSKTVFFLMYDENDGFFDHLAPPQPPT CHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCHHCCCCCCCCC HRGQGLSTVDVSAEIHNVVNPRRGGSYTADNLPYGMGPRVPMIVISPWTKGGYVNSQVFD CCCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHH HTSVIRFMEQRFGVMEPNISPWRRAVSGDLLSCFDFGTPDAAFPVLPDTSNYQAKSDASC HHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC QNPKAAVPAVPSPASIKEQEAGVRAARALPYELHANGREAIKENEFQIHFSNTGKVGACF CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCHHHHCCCCEEEEECCCCCEEEEE YVYSTNRSDGPWRYTVEAGKSIADTFNLAGTGGVYNFLVYGPNGFVRHFVGAIPQDQKTR EEEECCCCCCCEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHCCCCCHHHH HRSARPTVVVGYDAANGNVMLKISNKGGKAVKLSVTDNAYGAQTRRFSIPSEGFVEEVWT HCCCCCEEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHH LRHSHQWYDLTVSDGAAFAWRAAGHVENGRSSFSDPAATQVVTELSSSIVTSPTAIALQD HHCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC PALPDMPTV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10523590 [H]