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The map label for this gene is yijO [C]

Identifier: 238025286

GI number: 238025286

Start: 2434817

End: 2435773

Strand: Direct

Name: yijO [C]

Synonym: bglu_2g19600

Alternate gene names: 238025286

Gene position: 2434817-2435773 (Clockwise)

Preceding gene: 238025284

Following gene: 238025287

Centisome position: 86.12

GC content: 73.25

Gene sequence:

>957_bases
ATGAAACCCGCCAGCGCCACGCCGCCGATCCTCCTCACGCCGCCCGCCACCGCCGCCGAACTCGCGAACGCGGCCGACCT
GCCGTTCGGCATGCAGTCGGTGTGCCGCACGCTCGCCAAGGCGGACGCGCAGCTGCACCGCTTTGCATGGCTCGGCGACC
ATCTCGCGGTCGCCGAATGGACGCGCGCCACCGAGGTCGCCGAAACGGCCTACGAGCAGCCGGGCCACCACACGCTGTCG
TGCTACCTCGCGGGCGGCTACCGCACCGAGCGGCAGAAGCTGCCGGGGCGCTACGGCGCGCCGAGCCGGCTCTGCGCGCT
GCCGGGCGACCACGAATCGCGCTGGTGGGTGCGCGGCGAGATGCACTTCCTGCATCTGTACTTCCTGCCCGAGCACTTCT
CGCGGCGCGCCGTGCGCGAGCTCGACCGCGAGCCGCGCGAGATGGGCCTGGCCGATCGCACCTATTTCGAGGACCCGCGC
ATCGCCGAGCTGTGCCGCTCGCTGCTGCTGGAATCGTGGGACGACGTGGACGGCCGGCTGCGCGCGAACGAGACCGCCCA
CGACGTGCTGAGCCTGCTGATGCGCGGCCAGAGCGCCCTGCGCGCCGGCCTGCCGCGCACCGGCGGCCTCTCGCCCGCGG
TGCGGCGGCGCCTGCGCGACTACATCGAGACGCGGCTCGCGCAGCCGATCACGCTCGGCGAGCTCGCCGATCTCGCGGCG
CTGTCCGAATACCATTTCTCGCGGATGTTCCGCATTTCGTTCGGCAGCCCGCCGCACGCCTGGATCGCCGAGCAGCGGCT
GGCACGCGCCCGCGCGCTGCTGCGCGGCACGGCGCTGCCGCTCGCGCAGGTGGCCGCGCAATGCGGCTACGCGAACGCCG
CGCATTTCAGCCACCGGTTCCGCGATGCGCACGGCGTGGCGCCCACCGCATTCCGGCAGGCGATGCGGCAAGCGTGA

Upstream 100 bases:

>100_bases
CCTGCACTGTGCCGGGCTGCGCGCCGCCGCGCTTGTCCGGAATTGCGGTCTTGATGAAATCAGCCGGGCCGGCTCGCGCG
CGCGCCCCTATACTGCGCCA

Downstream 100 bases:

>100_bases
CGGCCCGGCGCGGGGGCGGCCCGCGCTTCGGGGCTTCGGCACGTCCAGCGCATGGCCGCGCCGGCGCGGCCGCCCGGCGC
CACCGTTGCCTCGCCGCGAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator AraC; Transcription Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Protein AraC Family; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; Transcriptional Regulator AraC-Type; HTH-Type Transcriptional Regulator; AraC Family Regulatory Protein; Transcriptional Regulatory Protein; AraC-Family Transcriptional Regulator; AraC Family Transcription Regulator; HTH-Type Transcriptional Regulator ChbR; Transcription Regulator Protein; AraC-Type Trancriptional Regulator; AraC Family Regulatory Helix-Turn-Helix; AraC Family Transcription Regulator Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKPASATPPILLTPPATAAELANAADLPFGMQSVCRTLAKADAQLHRFAWLGDHLAVAEWTRATEVAETAYEQPGHHTLS
CYLAGGYRTERQKLPGRYGAPSRLCALPGDHESRWWVRGEMHFLHLYFLPEHFSRRAVRELDREPREMGLADRTYFEDPR
IAELCRSLLLESWDDVDGRLRANETAHDVLSLLMRGQSALRAGLPRTGGLSPAVRRRLRDYIETRLAQPITLGELADLAA
LSEYHFSRMFRISFGSPPHAWIAEQRLARARALLRGTALPLAQVAAQCGYANAAHFSHRFRDAHGVAPTAFRQAMRQA

Sequences:

>Translated_318_residues
MKPASATPPILLTPPATAAELANAADLPFGMQSVCRTLAKADAQLHRFAWLGDHLAVAEWTRATEVAETAYEQPGHHTLS
CYLAGGYRTERQKLPGRYGAPSRLCALPGDHESRWWVRGEMHFLHLYFLPEHFSRRAVRELDREPREMGLADRTYFEDPR
IAELCRSLLLESWDDVDGRLRANETAHDVLSLLMRGQSALRAGLPRTGGLSPAVRRRLRDYIETRLAQPITLGELADLAA
LSEYHFSRMFRISFGSPPHAWIAEQRLARARALLRGTALPLAQVAAQCGYANAAHFSHRFRDAHGVAPTAFRQAMRQA
>Mature_318_residues
MKPASATPPILLTPPATAAELANAADLPFGMQSVCRTLAKADAQLHRFAWLGDHLAVAEWTRATEVAETAYEQPGHHTLS
CYLAGGYRTERQKLPGRYGAPSRLCALPGDHESRWWVRGEMHFLHLYFLPEHFSRRAVRELDREPREMGLADRTYFEDPR
IAELCRSLLLESWDDVDGRLRANETAHDVLSLLMRGQSALRAGLPRTGGLSPAVRRRLRDYIETRLAQPITLGELADLAA
LSEYHFSRMFRISFGSPPHAWIAEQRLARARALLRGTALPLAQVAAQCGYANAAHFSHRFRDAHGVAPTAFRQAMRQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35607; Mature: 35607

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPASATPPILLTPPATAAELANAADLPFGMQSVCRTLAKADAQLHRFAWLGDHLAVAEW
CCCCCCCCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TRATEVAETAYEQPGHHTLSCYLAGGYRTERQKLPGRYGAPSRLCALPGDHESRWWVRGE
HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCEEECCCCCCCCEEEECC
MHFLHLYFLPEHFSRRAVRELDREPREMGLADRTYFEDPRIAELCRSLLLESWDDVDGRL
EEEEEEEECHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCE
RANETAHDVLSLLMRGQSALRAGLPRTGGLSPAVRRRLRDYIETRLAQPITLGELADLAA
ECCCHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LSEYHFSRMFRISFGSPPHAWIAEQRLARARALLRGTALPLAQVAAQCGYANAAHFSHRF
HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
RDAHGVAPTAFRQAMRQA
HHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKPASATPPILLTPPATAAELANAADLPFGMQSVCRTLAKADAQLHRFAWLGDHLAVAEW
CCCCCCCCCEEECCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
TRATEVAETAYEQPGHHTLSCYLAGGYRTERQKLPGRYGAPSRLCALPGDHESRWWVRGE
HHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHCCCCCCCCCCEEECCCCCCCCEEEECC
MHFLHLYFLPEHFSRRAVRELDREPREMGLADRTYFEDPRIAELCRSLLLESWDDVDGRL
EEEEEEEECHHHHHHHHHHHHHCCHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCE
RANETAHDVLSLLMRGQSALRAGLPRTGGLSPAVRRRLRDYIETRLAQPITLGELADLAA
ECCCHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LSEYHFSRMFRISFGSPPHAWIAEQRLARARALLRGTALPLAQVAAQCGYANAAHFSHRF
HHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHH
RDAHGVAPTAFRQAMRQA
HHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA