| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yicG [C]
Identifier: 238025287
GI number: 238025287
Start: 2436107
End: 2436739
Strand: Direct
Name: yicG [C]
Synonym: bglu_2g19610
Alternate gene names: 238025287
Gene position: 2436107-2436739 (Clockwise)
Preceding gene: 238025286
Following gene: 238025289
Centisome position: 86.16
GC content: 72.35
Gene sequence:
>633_bases ATGAACGGCCACGTCGCCTACGCCGTGCTCGACCTGACGGGCACGTTCGCGTTCGCGATCAGCGGCGCGGTGGCCGCGCG CCAGCGCCGGCTCGACCTGTTCGGCGTGGTGTTCGTCACCTTCATCGTGGCGTGCGGCGGCGGCATCGTGCGCGATGTCT GCATCGGCGCCGTGCCGCCGGCGGGCCTCGCGAACTGGAGCTATCTGGCGGTCTCGCTCGGCGCGGCCGCGCTGACCGTT GCCGCCTATCAGAAAGTGCGCCGGCTGCGCTACCCGGTGCTGCTGTTCGATGCGATCGGGCTCGGCCTGTTCGCCGTGTC GGGCGCGCAGAAGGCGCTCGCCTACAGCGGCAGCGCCGAGGTGGCGATCCTGCTCGGCATGTTCAGCGCGGTGGGCGGCG GCGTGATCCGCGACGTGCTGCTCTCGCGCGTGCCGGCCATCCTGCAGCGCGAGATCTACGCGCTGGCCGCGCTCTTCGGC GCCACGGTGGAAGTCGTCTCGCTGCGCACCAACTGGCTGCCGGTGCTCGCGCCCTGGCTCGCGATCGGCGCATGCGTGGC GATCCGCCTGTCGTCGCTCTACTTCGGCTGGCGGCTGCCGGTGTTCGGCCGGCGCCAGCCGGCCGGCGAGTGA
Upstream 100 bases:
>100_bases TGCCCTCCCGTCTCCGCCCGCCCACCCGGCCCACCCGGCCCACTCGGCCCACCCGGCCCGCCTGCGCCCACCCGGCAGCG GCGCCGAGGGCCGCGCGCGC
Downstream 100 bases:
>100_bases AGGCCGCGCGCGGCCCGGCCCGCGCGGCAACAGCGCAGTCCGTTCGCGTCGGGCCACGTCGGGCGCGGCCAGCAGCCGGC CAGCCGGCGCCGTGGCCCGC
Product: hypotheticalprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MNGHVAYAVLDLTGTFAFAISGAVAARQRRLDLFGVVFVTFIVACGGGIVRDVCIGAVPPAGLANWSYLAVSLGAAALTV AAYQKVRRLRYPVLLFDAIGLGLFAVSGAQKALAYSGSAEVAILLGMFSAVGGGVIRDVLLSRVPAILQREIYALAALFG ATVEVVSLRTNWLPVLAPWLAIGACVAIRLSSLYFGWRLPVFGRRQPAGE
Sequences:
>Translated_210_residues MNGHVAYAVLDLTGTFAFAISGAVAARQRRLDLFGVVFVTFIVACGGGIVRDVCIGAVPPAGLANWSYLAVSLGAAALTV AAYQKVRRLRYPVLLFDAIGLGLFAVSGAQKALAYSGSAEVAILLGMFSAVGGGVIRDVLLSRVPAILQREIYALAALFG ATVEVVSLRTNWLPVLAPWLAIGACVAIRLSSLYFGWRLPVFGRRQPAGE >Mature_210_residues MNGHVAYAVLDLTGTFAFAISGAVAARQRRLDLFGVVFVTFIVACGGGIVRDVCIGAVPPAGLANWSYLAVSLGAAALTV AAYQKVRRLRYPVLLFDAIGLGLFAVSGAQKALAYSGSAEVAILLGMFSAVGGGVIRDVLLSRVPAILQREIYALAALFG ATVEVVSLRTNWLPVLAPWLAIGACVAIRLSSLYFGWRLPVFGRRQPAGE
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=146, Percent_Identity=37.6712328767123, Blast_Score=94, Evalue=6e-21, Organism=Escherichia coli, GI1786352, Length=199, Percent_Identity=33.6683417085427, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22039; Mature: 22039
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGHVAYAVLDLTGTFAFAISGAVAARQRRLDLFGVVFVTFIVACGGGIVRDVCIGAVPP CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC AGLANWSYLAVSLGAAALTVAAYQKVRRLRYPVLLFDAIGLGLFAVSGAQKALAYSGSAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCCH VAILLGMFSAVGGGVIRDVLLSRVPAILQREIYALAALFGATVEVVSLRTNWLPVLAPWL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AIGACVAIRLSSLYFGWRLPVFGRRQPAGE HHHHHHHHHHHHHHHCEECCCCCCCCCCCC >Mature Secondary Structure MNGHVAYAVLDLTGTFAFAISGAVAARQRRLDLFGVVFVTFIVACGGGIVRDVCIGAVPP CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC AGLANWSYLAVSLGAAALTVAAYQKVRRLRYPVLLFDAIGLGLFAVSGAQKALAYSGSAE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHCCCCCH VAILLGMFSAVGGGVIRDVLLSRVPAILQREIYALAALFGATVEVVSLRTNWLPVLAPWL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AIGACVAIRLSSLYFGWRLPVFGRRQPAGE HHHHHHHHHHHHHHHCEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]