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The map label for this gene is cmpR [H]

Identifier: 238025284

GI number: 238025284

Start: 2432726

End: 2433634

Strand: Direct

Name: cmpR [H]

Synonym: bglu_2g19580

Alternate gene names: 238025284

Gene position: 2432726-2433634 (Clockwise)

Preceding gene: 238025282

Following gene: 238025286

Centisome position: 86.04

GC content: 72.39

Gene sequence:

>909_bases
ATGACCCTGACGCAGATTCGCGCCTTCCTCGCCGTGGTCCAGCACGGCGGCTTCACCGCCGCAGCCCGCGCGCTCGCGAT
CAGCCAGACCACCGTCACCTCGCAGATTCAGGGGCTCGAACAGGAACATGGCGTGCAGCTGTTCCACCGGCGCGGCCGGC
GCGTGGAGCTGTCCGCCGTCGGGCTCGACTTCCTGCCGCTCGCGCGGCAGATCCACGGCCTCGAGCACGACGCGCGCTCG
CTGCTGCACGACAGCGGCGAACTCACGCGCGGCATGCTGCGGATCGGCGCCGTGAGCCCGTTCCACGTGACCGAGATCAT
CGAGGCGTTCCATGCCGCGCATCCGCGCCTGCAACTGGCCGTCACGCTCGGCAACTCGGAGAGCGTGCTGAACGACCTCG
ACGACTATGCCTGCGAAGTCGGCGTGATCGCGCGCTCGTTCGGCGACGCACGCTACGAGATGGCGCCCTACGCGAGCTAT
CCGGTGATCGCGTTCGTGGGCGTGGCCCATCCGTTCGCGACGCGCGGCACGATCTCGCTTGCGGAACTCGCCAGCACGCC
GCTGCTGATGCGCGAGCCCGGCTCCACCACGCGCCGCGCGCTCGAGGATGCGCTCGCCAGGCTCGGTGCGACGCCGCGCG
TGGCGATGGAGATCGGCAGCCGCGAGGCCTTGCGCGAGGCGGTGGCACGCGGGCTGGGAGTGGGCACCGTGTCGCTGTCG
GAGTACGTGCCGGACGAGGCGCGGCTGCGGCCGGTGCGGATCGAGGGGGACCCCGTCAGCACGCACATCCATGTGTGCTG
CCTGCGCGAGCGGCGCGACAGCCGGCTGGTGGACGCCTTCTTCGCGGCGATGCGGCGCTGCCGGCCGGGTGCGCCGCGCG
CCGCGCGGGCTGCACCGGCGCGGGGGTGA

Upstream 100 bases:

>100_bases
ATCACGGACGGCAGCATAAATTTGCAACATGACCGGTCCATGATCGAAATACCCGGTGAAAACCGCTTTGTTCAACGAAA
AAACCGATCGGCCGCGTTCG

Downstream 100 bases:

>100_bases
GTGTCCGCCGCCGGGCGGTCGAGCACGGCGGCATCGGGGCTTGCGAAGCGACGGCGCTCGGCCCCGCCGGAGCAGCCGCG
GCAAGGCCGATCCCGCCGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTLTQIRAFLAVVQHGGFTAAARALAISQTTVTSQIQGLEQEHGVQLFHRRGRRVELSAVGLDFLPLARQIHGLEHDARS
LLHDSGELTRGMLRIGAVSPFHVTEIIEAFHAAHPRLQLAVTLGNSESVLNDLDDYACEVGVIARSFGDARYEMAPYASY
PVIAFVGVAHPFATRGTISLAELASTPLLMREPGSTTRRALEDALARLGATPRVAMEIGSREALREAVARGLGVGTVSLS
EYVPDEARLRPVRIEGDPVSTHIHVCCLRERRDSRLVDAFFAAMRRCRPGAPRAARAAPARG

Sequences:

>Translated_302_residues
MTLTQIRAFLAVVQHGGFTAAARALAISQTTVTSQIQGLEQEHGVQLFHRRGRRVELSAVGLDFLPLARQIHGLEHDARS
LLHDSGELTRGMLRIGAVSPFHVTEIIEAFHAAHPRLQLAVTLGNSESVLNDLDDYACEVGVIARSFGDARYEMAPYASY
PVIAFVGVAHPFATRGTISLAELASTPLLMREPGSTTRRALEDALARLGATPRVAMEIGSREALREAVARGLGVGTVSLS
EYVPDEARLRPVRIEGDPVSTHIHVCCLRERRDSRLVDAFFAAMRRCRPGAPRAARAAPARG
>Mature_301_residues
TLTQIRAFLAVVQHGGFTAAARALAISQTTVTSQIQGLEQEHGVQLFHRRGRRVELSAVGLDFLPLARQIHGLEHDARSL
LHDSGELTRGMLRIGAVSPFHVTEIIEAFHAAHPRLQLAVTLGNSESVLNDLDDYACEVGVIARSFGDARYEMAPYASYP
VIAFVGVAHPFATRGTISLAELASTPLLMREPGSTTRRALEDALARLGATPRVAMEIGSREALREAVARGLGVGTVSLSE
YVPDEARLRPVRIEGDPVSTHIHVCCLRERRDSRLVDAFFAAMRRCRPGAPRAARAAPARG

Specific function: Activates transcription of the cmpABCD operon under carbon dioxide-limited conditions. Specifically binds to the cmpR- cmpA intergenic region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=241, Percent_Identity=29.045643153527, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI157672245, Length=244, Percent_Identity=30.7377049180328, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1787879, Length=268, Percent_Identity=30.2238805970149, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1790399, Length=251, Percent_Identity=26.6932270916335, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787530, Length=301, Percent_Identity=24.9169435215947, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1788296, Length=230, Percent_Identity=26.5217391304348, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790208, Length=299, Percent_Identity=24.7491638795987, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI87082132, Length=246, Percent_Identity=26.8292682926829, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI145693105, Length=211, Percent_Identity=24.6445497630332, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787806, Length=249, Percent_Identity=24.0963855421687, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1787601, Length=289, Percent_Identity=25.2595155709343, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788748, Length=244, Percent_Identity=24.5901639344262, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32750; Mature: 32619

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTQIRAFLAVVQHGGFTAAARALAISQTTVTSQIQGLEQEHGVQLFHRRGRRVELSAV
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEC
GLDFLPLARQIHGLEHDARSLLHDSGELTRGMLRIGAVSPFHVTEIIEAFHAAHPRLQLA
CCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE
VTLGNSESVLNDLDDYACEVGVIARSFGDARYEMAPYASYPVIAFVGVAHPFATRGTISL
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCHHH
AELASTPLLMREPGSTTRRALEDALARLGATPRVAMEIGSREALREAVARGLGVGTVSLS
HHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCCEEEHH
EYVPDEARLRPVRIEGDPVSTHIHVCCLRERRDSRLVDAFFAAMRRCRPGAPRAARAAPA
HHCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
RG
CC
>Mature Secondary Structure 
TLTQIRAFLAVVQHGGFTAAARALAISQTTVTSQIQGLEQEHGVQLFHRRGRRVELSAV
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEC
GLDFLPLARQIHGLEHDARSLLHDSGELTRGMLRIGAVSPFHVTEIIEAFHAAHPRLQLA
CCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEE
VTLGNSESVLNDLDDYACEVGVIARSFGDARYEMAPYASYPVIAFVGVAHPFATRGTISL
EEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCHHH
AELASTPLLMREPGSTTRRALEDALARLGATPRVAMEIGSREALREAVARGLGVGTVSLS
HHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCCCEEEHH
EYVPDEARLRPVRIEGDPVSTHIHVCCLRERRDSRLVDAFFAAMRRCRPGAPRAARAAPA
HHCCCCCCEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCC
RG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]