Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is namA [H]

Identifier: 238025209

GI number: 238025209

Start: 2343803

End: 2344915

Strand: Direct

Name: namA [H]

Synonym: bglu_2g18800

Alternate gene names: 238025209

Gene position: 2343803-2344915 (Clockwise)

Preceding gene: 238025206

Following gene: 238025210

Centisome position: 82.9

GC content: 71.7

Gene sequence:

>1113_bases
ATGACCGCATTGTTCACCCCGTTCAGCCTGAAGGACGTCAAGCTGCGCAACCGCATCGCGGTGCCGCCGATGTGTCAGTA
CAGCGCCGCCGACGGCTTCGTCAACGACTGGCATCTCGCGCACTACACGAGCCTCGCGCGCGGCGGCGCCGGCCTGGTGA
TCGTCGAGGCCACCGCCGTTGCACCCGAAGGCCGCATCACGCCCGCCTGCACCGGCCTGTGGGACGATGCGCAAATCGAG
GGCCTCGCGCGCATCGCCGCCGCGATCAAGGCCGCGGGCGCCGTGCCCGGCATCCAGATCGCGCATGCCGGCCGCAAGGC
CAGCGCGAACCGCCCGTGGGAAGGCGACGACCACATCCCGAACGGCGCGCCCGGCGGCTGGCAGCCCCTCTCCCCGTCGG
CCGTGCCGTTCGGCGCGCAATTGCCGAAGGTGCCGACCGCGATGACGCTCGACGACATCGCGCGCGTGCGCGCCGATTTC
GCCGCCACCGCGCGCCGCGCGCTGGCGGCCGGCTTCGAGTGGCTCGAACTGCACTTCGCGCACGGCTATCTGGCGCAGAG
CTTCTTCTCGCCGCACGCGAACCAGCGCGACGACGACTACGGCGGCAGCTGGACCAAGCGCGGCCGCTTCCTGAACGAAA
CGCTCGCGGCGGTGCGCGAGGTCTGGCCCGAGCGCCTGCCGCTGACGGCACGCTTCGGCGTGATCGAATACGACGGCAAC
GACGCGGCCACGCTCGACGCCTCGATCAACCTGGCCGGCGACTTCAAGCGCGGCGGCCTGGACCTGCTCAGCGTCAGCAT
CGGCTTCTCGACGCCGGCCGCGAACATCCCGTGGGGGCCGGCGTTCCTCGCGCCGATCGCCGCGCGCGTAAAGCAGGAGA
CGGGGCTGCCGGTGGCCTCGGCGTGGGGCATCGATGATCCGGTCATCGCCAACCGCACGGTGGCCGACGCTCAGCTCGAC
CTGGTGATGGTGGGCCGCGCGCATCTGGCCAATCCACACTGGCCGTATCACGCGGGCAGGAAGCTCGGCGTCGAGCGCCC
GTCGTGGGTGCTGCCGGCGCCGTATGCGCACTGGCTCGAGCGCTACGCGCCCGCCACCAACGGCACGGCCTGA

Upstream 100 bases:

>100_bases
CTCCGTACAAACCCTGATCCGAAAATCGGACCCCATCCGTCCGGATCGATCGTTTCCCTGCGGGGCGCGCGCCCCCGCTT
CCGACCGAGAGGCATACCGC

Downstream 100 bases:

>100_bases
CGCGCGGTGAGCGCGCGCCGCGCAGACGACAACGGCGGCCCGCGGGCCGCCGTTTGTTTGCCGGCGCGGTGCCGGCGCGC
CGCGGTTCGCGCCCGGCCAG

Product: NADH-flavin oxidoreductase/NADH oxidase

Products: NA

Alternate protein names: Xenobiotic reductase [H]

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAVAPEGRITPACTGLWDDAQIE
GLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIPNGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADF
AATARRALAAGFEWLELHFAHGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN
DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVASAWGIDDPVIANRTVADAQLD
LVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLERYAPATNGTA

Sequences:

>Translated_370_residues
MTALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAVAPEGRITPACTGLWDDAQIE
GLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIPNGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADF
AATARRALAAGFEWLELHFAHGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN
DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVASAWGIDDPVIANRTVADAQLD
LVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLERYAPATNGTA
>Mature_369_residues
TALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAVAPEGRITPACTGLWDDAQIEG
LARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIPNGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADFA
ATARRALAAGFEWLELHFAHGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGND
AATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVASAWGIDDPVIANRTVADAQLDL
VMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLERYAPATNGTA

Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]

COG id: COG1902

COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787939, Length=358, Percent_Identity=27.0949720670391, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1789463, Length=349, Percent_Identity=26.3610315186246, Blast_Score=95, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17540738, Length=186, Percent_Identity=30.1075268817204, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17566914, Length=225, Percent_Identity=30.6666666666667, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565138, Length=245, Percent_Identity=24.8979591836735, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17559802, Length=188, Percent_Identity=28.7234042553192, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI72001454, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6321973, Length=231, Percent_Identity=27.2727272727273, Blast_Score=90, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6325086, Length=231, Percent_Identity=26.4069264069264, Blast_Score=90, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001155 [H]

Pfam domain/function: PF00724 Oxidored_FMN [H]

EC number: =1.6.99.1 [H]

Molecular weight: Translated: 39593; Mature: 39462

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAV
CCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEE
APEGRITPACTGLWDDAQIEGLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIP
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC
NGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADFAATARRALAAGFEWLELHFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHH
HGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN
HHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC
DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVAS
CCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AWGIDDPVIANRTVADAQLDLVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLE
CCCCCCCCCCCCEECCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHH
RYAPATNGTA
HHCCCCCCCC
>Mature Secondary Structure 
TALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAV
CEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEE
APEGRITPACTGLWDDAQIEGLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIP
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC
NGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADFAATARRALAAGFEWLELHFA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHH
HGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN
HHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC
DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVAS
CCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE
AWGIDDPVIANRTVADAQLDLVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLE
CCCCCCCCCCCCEECCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHH
RYAPATNGTA
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA