| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is namA [H]
Identifier: 238025209
GI number: 238025209
Start: 2343803
End: 2344915
Strand: Direct
Name: namA [H]
Synonym: bglu_2g18800
Alternate gene names: 238025209
Gene position: 2343803-2344915 (Clockwise)
Preceding gene: 238025206
Following gene: 238025210
Centisome position: 82.9
GC content: 71.7
Gene sequence:
>1113_bases ATGACCGCATTGTTCACCCCGTTCAGCCTGAAGGACGTCAAGCTGCGCAACCGCATCGCGGTGCCGCCGATGTGTCAGTA CAGCGCCGCCGACGGCTTCGTCAACGACTGGCATCTCGCGCACTACACGAGCCTCGCGCGCGGCGGCGCCGGCCTGGTGA TCGTCGAGGCCACCGCCGTTGCACCCGAAGGCCGCATCACGCCCGCCTGCACCGGCCTGTGGGACGATGCGCAAATCGAG GGCCTCGCGCGCATCGCCGCCGCGATCAAGGCCGCGGGCGCCGTGCCCGGCATCCAGATCGCGCATGCCGGCCGCAAGGC CAGCGCGAACCGCCCGTGGGAAGGCGACGACCACATCCCGAACGGCGCGCCCGGCGGCTGGCAGCCCCTCTCCCCGTCGG CCGTGCCGTTCGGCGCGCAATTGCCGAAGGTGCCGACCGCGATGACGCTCGACGACATCGCGCGCGTGCGCGCCGATTTC GCCGCCACCGCGCGCCGCGCGCTGGCGGCCGGCTTCGAGTGGCTCGAACTGCACTTCGCGCACGGCTATCTGGCGCAGAG CTTCTTCTCGCCGCACGCGAACCAGCGCGACGACGACTACGGCGGCAGCTGGACCAAGCGCGGCCGCTTCCTGAACGAAA CGCTCGCGGCGGTGCGCGAGGTCTGGCCCGAGCGCCTGCCGCTGACGGCACGCTTCGGCGTGATCGAATACGACGGCAAC GACGCGGCCACGCTCGACGCCTCGATCAACCTGGCCGGCGACTTCAAGCGCGGCGGCCTGGACCTGCTCAGCGTCAGCAT CGGCTTCTCGACGCCGGCCGCGAACATCCCGTGGGGGCCGGCGTTCCTCGCGCCGATCGCCGCGCGCGTAAAGCAGGAGA CGGGGCTGCCGGTGGCCTCGGCGTGGGGCATCGATGATCCGGTCATCGCCAACCGCACGGTGGCCGACGCTCAGCTCGAC CTGGTGATGGTGGGCCGCGCGCATCTGGCCAATCCACACTGGCCGTATCACGCGGGCAGGAAGCTCGGCGTCGAGCGCCC GTCGTGGGTGCTGCCGGCGCCGTATGCGCACTGGCTCGAGCGCTACGCGCCCGCCACCAACGGCACGGCCTGA
Upstream 100 bases:
>100_bases CTCCGTACAAACCCTGATCCGAAAATCGGACCCCATCCGTCCGGATCGATCGTTTCCCTGCGGGGCGCGCGCCCCCGCTT CCGACCGAGAGGCATACCGC
Downstream 100 bases:
>100_bases CGCGCGGTGAGCGCGCGCCGCGCAGACGACAACGGCGGCCCGCGGGCCGCCGTTTGTTTGCCGGCGCGGTGCCGGCGCGC CGCGGTTCGCGCCCGGCCAG
Product: NADH-flavin oxidoreductase/NADH oxidase
Products: NA
Alternate protein names: Xenobiotic reductase [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAVAPEGRITPACTGLWDDAQIE GLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIPNGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADF AATARRALAAGFEWLELHFAHGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVASAWGIDDPVIANRTVADAQLD LVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLERYAPATNGTA
Sequences:
>Translated_370_residues MTALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAVAPEGRITPACTGLWDDAQIE GLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIPNGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADF AATARRALAAGFEWLELHFAHGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVASAWGIDDPVIANRTVADAQLD LVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLERYAPATNGTA >Mature_369_residues TALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAVAPEGRITPACTGLWDDAQIEG LARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIPNGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADFA ATARRALAAGFEWLELHFAHGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGND AATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVASAWGIDDPVIANRTVADAQLDL VMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLERYAPATNGTA
Specific function: Catalyzes the reduction of the double bond of an array of alpha, beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=358, Percent_Identity=27.0949720670391, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1789463, Length=349, Percent_Identity=26.3610315186246, Blast_Score=95, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17540738, Length=186, Percent_Identity=30.1075268817204, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17566914, Length=225, Percent_Identity=30.6666666666667, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17565138, Length=245, Percent_Identity=24.8979591836735, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17559802, Length=188, Percent_Identity=28.7234042553192, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI72001454, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6321973, Length=231, Percent_Identity=27.2727272727273, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6325086, Length=231, Percent_Identity=26.4069264069264, Blast_Score=90, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: =1.6.99.1 [H]
Molecular weight: Translated: 39593; Mature: 39462
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAV CCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEE APEGRITPACTGLWDDAQIEGLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIP CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC NGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADFAATARRALAAGFEWLELHFA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHH HGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN HHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVAS CCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE AWGIDDPVIANRTVADAQLDLVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLE CCCCCCCCCCCCEECCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHH RYAPATNGTA HHCCCCCCCC >Mature Secondary Structure TALFTPFSLKDVKLRNRIAVPPMCQYSAADGFVNDWHLAHYTSLARGGAGLVIVEATAV CEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEE APEGRITPACTGLWDDAQIEGLARIAAAIKAAGAVPGIQIAHAGRKASANRPWEGDDHIP CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCC NGAPGGWQPLSPSAVPFGAQLPKVPTAMTLDDIARVRADFAATARRALAAGFEWLELHFA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHH HGYLAQSFFSPHANQRDDDYGGSWTKRGRFLNETLAAVREVWPERLPLTARFGVIEYDGN HHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCC DAATLDASINLAGDFKRGGLDLLSVSIGFSTPAANIPWGPAFLAPIAARVKQETGLPVAS CCEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEE AWGIDDPVIANRTVADAQLDLVMVGRAHLANPHWPYHAGRKLGVERPSWVLPAPYAHWLE CCCCCCCCCCCCEECCCEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHH RYAPATNGTA HHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA