Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024691

Identifier: 238024691

GI number: 238024691

Start: 1701855

End: 1703702

Strand: Reverse

Name: 238024691

Synonym: bglu_2g13260

Alternate gene names: NA

Gene position: 1703702-1701855 (Counterclockwise)

Preceding gene: 238024692

Following gene: 238024690

Centisome position: 60.26

GC content: 48.43

Gene sequence:

>1848_bases
ATGAAAAATAAATTTTCCCGATCAGTGATGTTTTCGGCTGTGGTGTTTTTGTCGGCATGCGGTGGTGGTGATGATGCACC
TTTGCCTCCCAATCCCCAGCCGCAAGCATCGACAACCGTGATGGTTTATATGGTTGGGTCTAATTTGGAAAGCATCCATA
AAAGTGCGGATGAGAATATAATCGAAATGCTTAAGGCGTCGCTCCCTCCCAATACCAATGTTGTAATTGAAACCGGAGGG
GCCGACGTCAGTAACGATGCGTCTCGGCAGATTCCGGATTGGATTGGTGTGAGGCGGCACGTACTATCGAGCGGAAAAAT
CCAGCAGGTCTCTGAGCTCGGGCGGCTAGACATGGGTGCGCCCAAGACATTGTCTGATTTTATCTATTGGGCGCAAAAAC
AGTATCCGGCAGGCAGTTATAAACTGCTGATGTGGGATCACGGTGGAGGTTGGACGGGTTTTGGTGGGGATGAAAATACT
AAGGCTGCAGATGGCTCCAATTCGATGCTGTCTCTGAATGCCTTGGCTCAAGGCATTCGCGACGGGGTCCAGGCATCGAA
TATTCATTTCGATGTTATTGGGTTCGATGCCTGCTTGATGGCTACAGTTGAGGTGTCGACTGCACTGAGCCCATATGCCA
ACTATCTTTTGGCTTCCGAAGAAATTGAGCCGGGATCGGGCTGGAATTGGACGTCGGTTATTTCGTCGGCGGCTCAAGAG
GCACGAACCTTTGGAAAGGTCGTTGCGGATTCTTATATCTTGAAACAAGAATCTGAGAAAAAAGACGGGACACTGTCTCT
CATCGATCTACAAAAAATTGGTGCGGTCCAAAGTGCTCTCGAATCATGGTCGGATTCGGTTATGGCCAAGGCGAGTGCGA
ATGATAGTAGCTGGTCCAACATAGTTTGGAAGCGCGCCACTTCGCTCGGTTTCGGCGGAACCGGCGACGGCACTAACGGA
GATGGATACCTTGATTTGGTGGATTTAAAGCTTTTCTCGAGAAGCATCTCGGACATCGTGCAAGGCTCGGAGAAACTATC
TGATTCGATCAGTCAGGCGGTGGTTTATAATAACACCACTTATAACTATGGCAATGCTTCCGGGCTGACGGCATATTTTC
CTTCTCGTTCATTGAGTAGTGCTGCCGGCTCTTTGCGTTATCAAGCTATCAATTTTTCTCAAAAATATCAGGATTTTTCA
AAAAACTATCTTTCCGTGATTTCGGCAAAGCCGCGTATTCATGAAATTGATGCTGCAGTCAAAAATGGAGCGATTGCGGC
TGATATCAGGGGTGATGCTGGCGTTCTTGATGTTGATAGTTTGTTGTTCTCTTCAGTGAATTCTGATGGTACGGCAACGT
TGGTGGGCAGCATGCCGATCTATTCTGGCGCGCAAAACTTCAGGGCAACGGTATCGGTGACGGCTCCGCTCTACGGTGCT
TGGCTGACCTTGAATGGTTATCCGCTGATTTTGGGTTATCTGAATCAACAGGGTGACGACCAGCTCTGGGGGGCGCCAAT
TGAATTGAATGGTGAATTTACCTATTTGTTGTACACCAAGGAAAATGATGGAAGTTGGGTTGCAGTGGGGACTGCTTCTT
CCATAAAAGACCCTGTCTATCGGGTGATGCCTTTGCCTTCTGCTGATGACAAGATTCAAATCTTGGGTGCGAAATTTGAT
GTGGGGGCTGCAAAAGCAGTAACCTTGATGCCTGTTACTCCGGAATTTAGCACCGGCAACTTCAATCTACAATTTACGTC
AGTTCCGGCCGGTATGAGTCAAGCCGTTTTGGATACGGACGCCACGTTTGACGCCAAGCTTTCCGACATTTATCCCCGCT
CAAACTAG

Upstream 100 bases:

>100_bases
AAGTCATCCGGCTTTTAAGATTGGATGCAGAGTGTTGATGAGAATTGGAAATTTTTCTGACAGTGGTTGTCTATTCTTTT
GAATGAAGTGGGGTTGGTTC

Downstream 100 bases:

>100_bases
GGACCGGCCTTGCGATTTTCGGGCCAGTTGAAGCTCGAGGGAATGGCTTCCCACGGAGAAAGGAAGTCATGAAGAAGAGC
CGGTTTACGGAATAGCACAT

Product: peptidase C11 clostripain

Products: NA

Alternate protein names: Clostripain; Cysteine Protease; FHA Domain-Containing Protein; APHP Domain Protein; Forkhead-Associated Protein

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENIIEMLKASLPPNTNVVIETGG
ADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGAPKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENT
KAADGSNSMLSLNALAQGIRDGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE
ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSNIVWKRATSLGFGGTGDGTNG
DGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTTYNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFS
KNYLSVISAKPRIHEIDAAVKNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA
WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVYRVMPLPSADDKIQILGAKFD
VGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTDATFDAKLSDIYPRSN

Sequences:

>Translated_615_residues
MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENIIEMLKASLPPNTNVVIETGG
ADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGAPKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENT
KAADGSNSMLSLNALAQGIRDGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE
ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSNIVWKRATSLGFGGTGDGTNG
DGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTTYNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFS
KNYLSVISAKPRIHEIDAAVKNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA
WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVYRVMPLPSADDKIQILGAKFD
VGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTDATFDAKLSDIYPRSN
>Mature_615_residues
MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENIIEMLKASLPPNTNVVIETGG
ADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGAPKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENT
KAADGSNSMLSLNALAQGIRDGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE
ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSNIVWKRATSLGFGGTGDGTNG
DGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTTYNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFS
KNYLSVISAKPRIHEIDAAVKNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA
WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVYRVMPLPSADDKIQILGAKFD
VGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTDATFDAKLSDIYPRSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65700; Mature: 65700

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENI
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
IEMLKASLPPNTNVVIETGGADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGA
HHHHHHCCCCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
PKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENTKAADGSNSMLSLNALAQGIR
CCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
DGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE
CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHH
ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSN
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH
IVWKRATSLGFGGTGDGTNGDGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTT
HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCE
YNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFSKNYLSVISAKPRIHEIDAAV
ECCCCCCCEEEECCCCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA
HCCCEEEECCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEE
WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVY
EEEECCCEEEEEECCCCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEECHHHCCCCCE
RVMPLPSADDKIQILGAKFDVGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTD
EEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCC
ATFDAKLSDIYPRSN
CCCCCCHHCCCCCCC
>Mature Secondary Structure
MKNKFSRSVMFSAVVFLSACGGGDDAPLPPNPQPQASTTVMVYMVGSNLESIHKSADENI
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
IEMLKASLPPNTNVVIETGGADVSNDASRQIPDWIGVRRHVLSSGKIQQVSELGRLDMGA
HHHHHHCCCCCCCEEEECCCCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
PKTLSDFIYWAQKQYPAGSYKLLMWDHGGGWTGFGGDENTKAADGSNSMLSLNALAQGIR
CCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
DGVQASNIHFDVIGFDACLMATVEVSTALSPYANYLLASEEIEPGSGWNWTSVISSAAQE
CCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHH
ARTFGKVVADSYILKQESEKKDGTLSLIDLQKIGAVQSALESWSDSVMAKASANDSSWSN
HHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH
IVWKRATSLGFGGTGDGTNGDGYLDLVDLKLFSRSISDIVQGSEKLSDSISQAVVYNNTT
HHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHEEEECCCE
YNYGNASGLTAYFPSRSLSSAAGSLRYQAINFSQKYQDFSKNYLSVISAKPRIHEIDAAV
ECCCCCCCEEEECCCCCHHHHHCCEEEEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KNGAIAADIRGDAGVLDVDSLLFSSVNSDGTATLVGSMPIYSGAQNFRATVSVTAPLYGA
HCCCEEEECCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCEEE
WLTLNGYPLILGYLNQQGDDQLWGAPIELNGEFTYLLYTKENDGSWVAVGTASSIKDPVY
EEEECCCEEEEEECCCCCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEECHHHCCCCCE
RVMPLPSADDKIQILGAKFDVGAAKAVTLMPVTPEFSTGNFNLQFTSVPAGMSQAVLDTD
EEECCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHCCCC
ATFDAKLSDIYPRSN
CCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA