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The map label for this gene is clpV1 [H]

Identifier: 238024507

GI number: 238024507

Start: 1419488

End: 1422196

Strand: Direct

Name: clpV1 [H]

Synonym: bglu_2g11100

Alternate gene names: 238024507

Gene position: 1419488-1422196 (Clockwise)

Preceding gene: 238024506

Following gene: 238024508

Centisome position: 50.21

GC content: 68.59

Gene sequence:

>2709_bases
ATGACCCTGCGCGATACGACCCATCTGCTGCGCCGACTCAACCCGCACTGCGCGAAGGCGCTCGAGGCGGCCGCCAGTCT
TTGCCAGGGGAGGCTCTCGGACGAAATTACGGTTGAGCACTGGCTGTTGAAACTGATCGAGGCCGGCGACGGCGATATTC
CGGCGATCCTGCTGCATTACCGGATCGGCATCGATGCCGTCTGGGACGCGTTGATTGCCGCGATCGAACGCCAGCCCCGC
CTCCTGCGGGGCAAGCCGGCGCTCTCGCCGCAGCTGGCGGCCGTGCTTCACGACGCGTGGCTTCACGCCACGTCGGAGAT
CGACGAGCAGGCCATCCGGTCTGGCCACTTGCTGCAGGCCATCGCCGACGCGCCGCACGTGCTGCGCGCGCAGCATGCCT
GGCCGCTGCTGTCGATCAGCAGCACGCAGATCCAGCGGCTGCTACCGCGTCTCGGTCATCGGTCGTGCGAAAGCCAGCCG
GAGCGCGTGGAAGCTGGAGCGGATGCCGAGGCGCTCGCCGCGGCTGGTGAAGTCCGGCCGGCAGCCGCCGCGAGCGACGG
CGCTCGAACGCCCGCGCCTCGGCGGACCGTCGAGGGCGACGCGCTTGCGCGCTTCGCGATCGATCTGACCGACAAGGCGC
GCCGCGGCGACATCGATCCCGTCTTCGGCCGCGATCGCGAGATCCAGCAGATGGTCGACGTGCTCGCGCGCCGGCGCAAG
AACAATCCGATTCTCGTCGGCGAACCGGGCGTGGGCAAAACCGCGCTCGTCGAAGGTCTCGCGTTGCGCGTGGCGCAAGC
CAACGTCCCGAACGTGATCCGCGAGGTGCGTATCCTGACGCTCGACCTGGGCCTGCTGCAGGCCGGCGCCGGCGTGAAGG
GGGAGTTCGAGCAGCGCCTGAAGAACGTCATTGACGAAGTGCAGGCCTCGCCCGTGCCGATCATGCTCTTCATCGACGAA
GCGCACACGCTGATCGGCGCGGGCAATGCCGCCGGCGGCGCGGATGCCGCGAACCTGCTCAAGCCGGCGCTTGCGCGCGG
CGAGCTGCGCACGATCGCGGCCACCACGTGGTCCGAATACAAGGAATTCTTCGAGCGTGACGCCGCGCTCGAGCGCCGTT
TCCAGATCATCAAGGTCGACGAGCCCGACGATGAAGCGGCATGCCTGATGCTGCGAGGCCTCAGGAGCCGCTACGCGCAA
CATCACCGCGTCCACATCCGCGACGAGGCGCTCGTCGCCGCGGTGAGGCTGTCGCGTCGCTATATTCCCGCACGGCAGCT
ACCCGACAAGGCAGTCGACCTGATCGACACGGCGGCCGCGCGCGTACGCATGGGTCTGGAGTCGCCGCCAGCGGAACTGC
AGCGGGCGCGGGCCGCCGTGTCGGCGCTCGAGCTGGAGTATGCGACGCTGGAAGACGATGCACGCGCAGGCATCGATAAC
GCGCAGGCGCGCCGCGCCTCGCTCGAGGCAGCGCTCGCGAGCGCAAAGTCTGCCCTGGCCGATCTGCAGCAGCGTTATGA
CACGGAGCTCCGGCTCGTTCAGGCATTGCACGAGCAGCGTGAGGTCGAGCCGTGCGCCCGCGACGGCGCCTCGTTCGCAC
AGGCGCGACAGGCGCTCGCCGGCGCCCAGGGAAAAACGCCGCTGATCTTCGCCGATGTGGATGCGCAGGCGATCGCGCGC
GTCGTCGCCGAGTGGACGGGCGTGCCCGTCGGCAACCTCGTCGAGGACGAGCTGCAAGGCCTGCTTGCGCTCGAGGCACA
GCTCGCAAGGCGTGTGGTCGCCCAGGACGATGCCCTCGCCGCGCTCGCCGAGAGCCTGCGCACCGCGAAGGCGGGGCTCA
GGAACGAGCATGCGCCGCTCGGCGTGTTCCTGCTTGCCGGCCCCTCTGGCGTGGGCAAGACCGAAACCGCCCTGGCCCTG
GCCGACCTCCTGTTCGGGGGCGAGGCCGCGCTCACGACGATCAATATGTCGGAGTACCAGGAATCGCATACGGTGTCACA
GTTGAAAGGCTCGCCGCCGGGCTACGTCGGATATGGCCGTGGCGGGATTCTGACCGAGGCGGTGCGCCAGCGCCCATATA
GCGTCGTGCTGCTCGACGAGGTCGAGAAGGCCCACCGCGACGTGCTGGACATCTTTTACCAGGTGTTCGATCGCGGCACG
ATGCGCGACGGCGAGGGGCGCGAGATCGACTTCCGCAACTGCGTGATCCTGATGACGTCCAATCTCGGCAGCGCGCAGAT
CGACGAGGCGATCACCGACAATCCCGGGATTGCGCAGGCCGCGCTGCTCGATGCCATTCATCCGCAACTCGTCGCGCACT
TCCAGCCCGCCCTGCTCGCCCGCTTCCAGACGCTCGTGTACCGGCCGCTGGACGCATCCGCGCTCGCCTCCATCATGCGC
CTGAAGCTCGCCAAGCTTGCAGGCCGCCTGCGCCGTCAGCACGATGTCGAACTGAGGTGCGACGAGTCGCTGATCGGCGC
GATGGCCGAGCTGTGTCTCGCTCGCGAATCCGGCGCACGCAGCGTCGACGCCTTCCTCGACCAGCGCATCCTGCCTACGG
TGTCGCGCGAGTTGCTGACTCGCATGGCCAGCGGCCTCGCGCCGGCGAAGATCGCGCTGTCGAGTTCGGCCGAGGGCAAC
CTCACGATCGACTTCGTCGATCGCGGCGAACCGGTGGACGCCGCAGCCAGCGAGCCGTCCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCCGGTCCCTTTACCAGCCCGTGGTCCGGGCTAGTCTTTTTCCACCTCGAAGCGGGCGCCCAGACTGTCGCCCGCTCTCT
TTTGCGACCCGGCTTCCGTC

Downstream 100 bases:

>100_bases
CAGGAGCGAAGCCATGCCGGCGGGCCCCTCTCTCTACGACATGCTGCTCGGCCAGATCGGGGGGGAACCGCTGGCCGCGT
ATGACGACCGGACGCTCGAA

Product: type VI secretion ATPase, ClpV1 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 902; Mature: 901

Protein sequence:

>902_residues
MTLRDTTHLLRRLNPHCAKALEAAASLCQGRLSDEITVEHWLLKLIEAGDGDIPAILLHYRIGIDAVWDALIAAIERQPR
LLRGKPALSPQLAAVLHDAWLHATSEIDEQAIRSGHLLQAIADAPHVLRAQHAWPLLSISSTQIQRLLPRLGHRSCESQP
ERVEAGADAEALAAAGEVRPAAAASDGARTPAPRRTVEGDALARFAIDLTDKARRGDIDPVFGRDREIQQMVDVLARRRK
NNPILVGEPGVGKTALVEGLALRVAQANVPNVIREVRILTLDLGLLQAGAGVKGEFEQRLKNVIDEVQASPVPIMLFIDE
AHTLIGAGNAAGGADAANLLKPALARGELRTIAATTWSEYKEFFERDAALERRFQIIKVDEPDDEAACLMLRGLRSRYAQ
HHRVHIRDEALVAAVRLSRRYIPARQLPDKAVDLIDTAAARVRMGLESPPAELQRARAAVSALELEYATLEDDARAGIDN
AQARRASLEAALASAKSALADLQQRYDTELRLVQALHEQREVEPCARDGASFAQARQALAGAQGKTPLIFADVDAQAIAR
VVAEWTGVPVGNLVEDELQGLLALEAQLARRVVAQDDALAALAESLRTAKAGLRNEHAPLGVFLLAGPSGVGKTETALAL
ADLLFGGEAALTTINMSEYQESHTVSQLKGSPPGYVGYGRGGILTEAVRQRPYSVVLLDEVEKAHRDVLDIFYQVFDRGT
MRDGEGREIDFRNCVILMTSNLGSAQIDEAITDNPGIAQAALLDAIHPQLVAHFQPALLARFQTLVYRPLDASALASIMR
LKLAKLAGRLRRQHDVELRCDESLIGAMAELCLARESGARSVDAFLDQRILPTVSRELLTRMASGLAPAKIALSSSAEGN
LTIDFVDRGEPVDAAASEPSGA

Sequences:

>Translated_902_residues
MTLRDTTHLLRRLNPHCAKALEAAASLCQGRLSDEITVEHWLLKLIEAGDGDIPAILLHYRIGIDAVWDALIAAIERQPR
LLRGKPALSPQLAAVLHDAWLHATSEIDEQAIRSGHLLQAIADAPHVLRAQHAWPLLSISSTQIQRLLPRLGHRSCESQP
ERVEAGADAEALAAAGEVRPAAAASDGARTPAPRRTVEGDALARFAIDLTDKARRGDIDPVFGRDREIQQMVDVLARRRK
NNPILVGEPGVGKTALVEGLALRVAQANVPNVIREVRILTLDLGLLQAGAGVKGEFEQRLKNVIDEVQASPVPIMLFIDE
AHTLIGAGNAAGGADAANLLKPALARGELRTIAATTWSEYKEFFERDAALERRFQIIKVDEPDDEAACLMLRGLRSRYAQ
HHRVHIRDEALVAAVRLSRRYIPARQLPDKAVDLIDTAAARVRMGLESPPAELQRARAAVSALELEYATLEDDARAGIDN
AQARRASLEAALASAKSALADLQQRYDTELRLVQALHEQREVEPCARDGASFAQARQALAGAQGKTPLIFADVDAQAIAR
VVAEWTGVPVGNLVEDELQGLLALEAQLARRVVAQDDALAALAESLRTAKAGLRNEHAPLGVFLLAGPSGVGKTETALAL
ADLLFGGEAALTTINMSEYQESHTVSQLKGSPPGYVGYGRGGILTEAVRQRPYSVVLLDEVEKAHRDVLDIFYQVFDRGT
MRDGEGREIDFRNCVILMTSNLGSAQIDEAITDNPGIAQAALLDAIHPQLVAHFQPALLARFQTLVYRPLDASALASIMR
LKLAKLAGRLRRQHDVELRCDESLIGAMAELCLARESGARSVDAFLDQRILPTVSRELLTRMASGLAPAKIALSSSAEGN
LTIDFVDRGEPVDAAASEPSGA
>Mature_901_residues
TLRDTTHLLRRLNPHCAKALEAAASLCQGRLSDEITVEHWLLKLIEAGDGDIPAILLHYRIGIDAVWDALIAAIERQPRL
LRGKPALSPQLAAVLHDAWLHATSEIDEQAIRSGHLLQAIADAPHVLRAQHAWPLLSISSTQIQRLLPRLGHRSCESQPE
RVEAGADAEALAAAGEVRPAAAASDGARTPAPRRTVEGDALARFAIDLTDKARRGDIDPVFGRDREIQQMVDVLARRRKN
NPILVGEPGVGKTALVEGLALRVAQANVPNVIREVRILTLDLGLLQAGAGVKGEFEQRLKNVIDEVQASPVPIMLFIDEA
HTLIGAGNAAGGADAANLLKPALARGELRTIAATTWSEYKEFFERDAALERRFQIIKVDEPDDEAACLMLRGLRSRYAQH
HRVHIRDEALVAAVRLSRRYIPARQLPDKAVDLIDTAAARVRMGLESPPAELQRARAAVSALELEYATLEDDARAGIDNA
QARRASLEAALASAKSALADLQQRYDTELRLVQALHEQREVEPCARDGASFAQARQALAGAQGKTPLIFADVDAQAIARV
VAEWTGVPVGNLVEDELQGLLALEAQLARRVVAQDDALAALAESLRTAKAGLRNEHAPLGVFLLAGPSGVGKTETALALA
DLLFGGEAALTTINMSEYQESHTVSQLKGSPPGYVGYGRGGILTEAVRQRPYSVVLLDEVEKAHRDVLDIFYQVFDRGTM
RDGEGREIDFRNCVILMTSNLGSAQIDEAITDNPGIAQAALLDAIHPQLVAHFQPALLARFQTLVYRPLDASALASIMRL
KLAKLAGRLRRQHDVELRCDESLIGAMAELCLARESGARSVDAFLDQRILPTVSRELLTRMASGLAPAKIALSSSAEGNL
TIDFVDRGEPVDAAASEPSGA

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=297, Percent_Identity=33.6700336700337, Blast_Score=164, Evalue=3e-40,
Organism=Escherichia coli, GI1788943, Length=696, Percent_Identity=42.9597701149425, Blast_Score=531, Evalue=1e-152,
Organism=Escherichia coli, GI1787109, Length=266, Percent_Identity=45.4887218045113, Blast_Score=242, Evalue=9e-65,
Organism=Saccharomyces cerevisiae, GI6320464, Length=645, Percent_Identity=40.6201550387597, Blast_Score=458, Evalue=1e-129,
Organism=Saccharomyces cerevisiae, GI6323002, Length=735, Percent_Identity=37.8231292517007, Blast_Score=442, Evalue=1e-124,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 97441; Mature: 97310

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRDTTHLLRRLNPHCAKALEAAASLCQGRLSDEITVEHWLLKLIEAGDGDIPAILLHY
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
RIGIDAVWDALIAAIERQPRLLRGKPALSPQLAAVLHDAWLHATSEIDEQAIRSGHLLQA
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IADAPHVLRAQHAWPLLSISSTQIQRLLPRLGHRSCESQPERVEAGADAEALAAAGEVRP
HHCCCHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHCCCCC
AAAASDGARTPAPRRTVEGDALARFAIDLTDKARRGDIDPVFGRDREIQQMVDVLARRRK
CCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
NNPILVGEPGVGKTALVEGLALRVAQANVPNVIREVRILTLDLGLLQAGAGVKGEFEQRL
CCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KNVIDEVQASPVPIMLFIDEAHTLIGAGNAAGGADAANLLKPALARGELRTIAATTWSEY
HHHHHHHCCCCCEEEEEEECCHHHEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KEFFERDAALERRFQIIKVDEPDDEAACLMLRGLRSRYAQHHRVHIRDEALVAAVRLSRR
HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHH
YIPARQLPDKAVDLIDTAAARVRMGLESPPAELQRARAAVSALELEYATLEDDARAGIDN
CCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCH
AQARRASLEAALASAKSALADLQQRYDTELRLVQALHEQREVEPCARDGASFAQARQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
GAQGKTPLIFADVDAQAIARVVAEWTGVPVGNLVEDELQGLLALEAQLARRVVAQDDALA
CCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ALAESLRTAKAGLRNEHAPLGVFLLAGPSGVGKTETALALADLLFGGEAALTTINMSEYQ
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHEEEEEHHHHH
ESHTVSQLKGSPPGYVGYGRGGILTEAVRQRPYSVVLLDEVEKAHRDVLDIFYQVFDRGT
HHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCC
MRDGEGREIDFRNCVILMTSNLGSAQIDEAITDNPGIAQAALLDAIHPQLVAHFQPALLA
CCCCCCCEEECCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQTLVYRPLDASALASIMRLKLAKLAGRLRRQHDVELRCDESLIGAMAELCLARESGAR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCC
SVDAFLDQRILPTVSRELLTRMASGLAPAKIALSSSAEGNLTIDFVDRGEPVDAAASEPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
GA
CC
>Mature Secondary Structure 
TLRDTTHLLRRLNPHCAKALEAAASLCQGRLSDEITVEHWLLKLIEAGDGDIPAILLHY
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHH
RIGIDAVWDALIAAIERQPRLLRGKPALSPQLAAVLHDAWLHATSEIDEQAIRSGHLLQA
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
IADAPHVLRAQHAWPLLSISSTQIQRLLPRLGHRSCESQPERVEAGADAEALAAAGEVRP
HHCCCHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHCCCCC
AAAASDGARTPAPRRTVEGDALARFAIDLTDKARRGDIDPVFGRDREIQQMVDVLARRRK
CCCCCCCCCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
NNPILVGEPGVGKTALVEGLALRVAQANVPNVIREVRILTLDLGLLQAGAGVKGEFEQRL
CCCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KNVIDEVQASPVPIMLFIDEAHTLIGAGNAAGGADAANLLKPALARGELRTIAATTWSEY
HHHHHHHCCCCCEEEEEEECCHHHEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
KEFFERDAALERRFQIIKVDEPDDEAACLMLRGLRSRYAQHHRVHIRDEALVAAVRLSRR
HHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHH
YIPARQLPDKAVDLIDTAAARVRMGLESPPAELQRARAAVSALELEYATLEDDARAGIDN
CCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCH
AQARRASLEAALASAKSALADLQQRYDTELRLVQALHEQREVEPCARDGASFAQARQALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
GAQGKTPLIFADVDAQAIARVVAEWTGVPVGNLVEDELQGLLALEAQLARRVVAQDDALA
CCCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ALAESLRTAKAGLRNEHAPLGVFLLAGPSGVGKTETALALADLLFGGEAALTTINMSEYQ
HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHEEEEEHHHHH
ESHTVSQLKGSPPGYVGYGRGGILTEAVRQRPYSVVLLDEVEKAHRDVLDIFYQVFDRGT
HHHHHHHHCCCCCCEECCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHCCCC
MRDGEGREIDFRNCVILMTSNLGSAQIDEAITDNPGIAQAALLDAIHPQLVAHFQPALLA
CCCCCCCEEECCCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQTLVYRPLDASALASIMRLKLAKLAGRLRRQHDVELRCDESLIGAMAELCLARESGAR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCC
SVDAFLDQRILPTVSRELLTRMASGLAPAKIALSSSAEGNLTIDFVDRGEPVDAAASEPS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]