Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024508

Identifier: 238024508

GI number: 238024508

Start: 1422210

End: 1422638

Strand: Direct

Name: 238024508

Synonym: bglu_2g11110

Alternate gene names: NA

Gene position: 1422210-1422638 (Clockwise)

Preceding gene: 238024507

Following gene: 238024509

Centisome position: 50.3

GC content: 64.8

Gene sequence:

>429_bases
ATGCCGGCGGGCCCCTCTCTCTACGACATGCTGCTCGGCCAGATCGGGGGGGAACCGCTGGCCGCGTATGACGACCGGAC
GCTCGAATGCATGAGCGTGCAGCAGAACGTCCAGCGCATCCTGAACACGCGCGCCGGCACGTTGAAGCACCTGCCCGACT
ACGGGCTGCCGGACCTGACGAACATCTACAAGGCCTTGCCCGCCTCCGCCCACCTGCTCAAGGAGCAGATGGAGGCCACG
CTGCTCAGGTACGAGCCACGCATCCGGTCAATCGACGTCGAGATCCTCGACAACGACGATCCCGGCGTGCTCGTGAGCTT
CGAGATGAGCTGTCACCTGAAGAAGGCCGGATTGGTCCGGTTCGGCACGTACTTCGAGCCGCCCGGGCGCATGCGCGTGA
AACGGCAACAGACGAAATCCGGCGGCTGA

Upstream 100 bases:

>100_bases
AGTTCGGCCGAGGGCAACCTCACGATCGACTTCGTCGATCGCGGCGAACCGGTGGACGCCGCAGCCAGCGAGCCGTCCGG
CGCCTGACAGGAGCGAAGCC

Downstream 100 bases:

>100_bases
GCAAGCGGTCCGGGCGCCCGCGGCCGGACCGGCGCGTTTGCCCGCCTGTCACGCCGCTCGCCCGAGACGCGGCCGGCGCG
GCACGTTGATTGTCCATGAC

Product: type VI secretion system lysozyme-like protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Type VI Secretion System Lysozyme Protein; Type VI Secretion System Protein; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MPAGPSLYDMLLGQIGGEPLAAYDDRTLECMSVQQNVQRILNTRAGTLKHLPDYGLPDLTNIYKALPASAHLLKEQMEAT
LLRYEPRIRSIDVEILDNDDPGVLVSFEMSCHLKKAGLVRFGTYFEPPGRMRVKRQQTKSGG

Sequences:

>Translated_142_residues
MPAGPSLYDMLLGQIGGEPLAAYDDRTLECMSVQQNVQRILNTRAGTLKHLPDYGLPDLTNIYKALPASAHLLKEQMEAT
LLRYEPRIRSIDVEILDNDDPGVLVSFEMSCHLKKAGLVRFGTYFEPPGRMRVKRQQTKSGG
>Mature_141_residues
PAGPSLYDMLLGQIGGEPLAAYDDRTLECMSVQQNVQRILNTRAGTLKHLPDYGLPDLTNIYKALPASAHLLKEQMEATL
LRYEPRIRSIDVEILDNDDPGVLVSFEMSCHLKKAGLVRFGTYFEPPGRMRVKRQQTKSGG

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15861; Mature: 15729

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAGPSLYDMLLGQIGGEPLAAYDDRTLECMSVQQNVQRILNTRAGTLKHLPDYGLPDLT
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHH
NIYKALPASAHLLKEQMEATLLRYEPRIRSIDVEILDNDDPGVLVSFEMSCHLKKAGLVR
HHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEE
FGTYFEPPGRMRVKRQQTKSGG
ECCEECCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
PAGPSLYDMLLGQIGGEPLAAYDDRTLECMSVQQNVQRILNTRAGTLKHLPDYGLPDLT
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHH
NIYKALPASAHLLKEQMEATLLRYEPRIRSIDVEILDNDDPGVLVSFEMSCHLKKAGLVR
HHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEE
FGTYFEPPGRMRVKRQQTKSGG
ECCEECCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA