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The map label for this gene is yiaD [H]

Identifier: 238024505

GI number: 238024505

Start: 1416959

End: 1418767

Strand: Direct

Name: yiaD [H]

Synonym: bglu_2g11080

Alternate gene names: 238024505

Gene position: 1416959-1418767 (Clockwise)

Preceding gene: 238024504

Following gene: 238024506

Centisome position: 50.12

GC content: 69.26

Gene sequence:

>1809_bases
GTGAAGCCCGACCTGCCGGTTCTGCCCGCCACGCCGGCGCGCGATCCTGATGACGGACACGAAGGGCTCGGTTATCCGTT
TCGGATGATGATCGTGTTCGCCGCTGCGCTCGCGCTCGCGGTGGTCTGGCTCGTGCTGCCGCTCGGCCGTGGCGCGATCT
GGGCGCTCACCGCGGTCATCGGCATCGTCGTGCTCGCGCTGACGGGGTGGTTCACCCGCCGGCTGTCGCGCGCACGCGAG
CAGAGCGCGCACGTGCTTGCCGCGCTCGGCGCAGCGACTGCGGATATTCCCGTCAGGCTGCGCATACGCATGCCGCTTGT
CCTGATCACCGGCGATGGCTTGCCTGCCTTGTTCAACCTCACCGAAGCGGAACGCTTCGCGCATGTCGGCGATGGGGCGA
TCTGGCTGCGCGTCGATCGTCCTCAGGATCTGCCGCGCCTCGCCGTCGCGGTCCGGCAGTGGCGCGACGGTCGCGTGCCC
GATGGCGTCGTGCTTTGTGTGGCGCCGGCTCTGCACGCGGGGCCGGACGTCCTGACGCAGAAACTGCGATTGGTCCGTCA
GGCGGTCGCCGACGCGGCGCGAACGCTGGGCGCGCGTCTGCCCGGCTACGTCGCTGTCTATCAGCGGCTGACGGCTGGAG
AAGGTTCCGACGTTCCGCATGCGATCCCCGGTTTGGCGGCCGCGGCCAGCGCGAATCGCGCGGCATCGCAATGGTATGGC
GTTTCCTCGGCGACGCGCCTGGTCGACGCCGAGCGCTTCGAGCCGGTGATCCGTGCCGCCGAAGAGGCGGTCCAGCACGC
GTCGGGCGACCGGCTAGCCGCTACCCGCGCAGCCGCCCTGGCGTCAATCGTTGGATGGACGCAGCGCGTCGTGATCGGTG
CGCTGACGGACCGGCAGCAGCCGGCCGCGCCCTGGGCACTGTTCGGTGCCGGCTGGATTGACTGCGGACCCGCGAACGCC
GTGGGCATGTCGGTCGATCGGGGCACGGGGAATCCATGGCAACGCGACGTCGAGATGCAGACCCGGGTCGAGCCCGCCGA
TGCCGAGGCTTCGGCGCTGCCATGGCCATTCCCGCAGCCCTTGCTCGCGGCGATGCCACGCCGGCTGTGGGTGTCGCCGC
GCATGACGGCCTTCGCCCATGCGCTCGCGCTTGCCGCGTGTGCGGCCGCCGTGGCGTTCTGGGCGTCGGCGAAAAACAAC
GAGGCGTTACTAAACCGTATCGGCGCCGACCTCGGACGCTATTCAACGGTCCCGCCCGCGCACGACGCCGCGAAGCGCGA
CGCGTTGGAGGCGCTGATCGCGGATCGGGATCAACTCGACCGATATGCACGCACCGGCGTACCGCTTCGCCTGTCGTTCG
GCATGTACCGGGGCGCCCGGCTGATGCCGGCGCTCAACGATGCGATCGCCTCCTACGTGCCCCCGCCTCCGCCGCCCGCG
GTCGTCACGCTCGACAGCATGTCGCTGTTCGACAGCGGCCGCTCGCAACTGAAACCGGGTTCGACACGAGCGATGGTCGG
TGCGCTCGAAATGATCAAGGCGCATCCGGATAAACGGATTCTCGTGGCCGGATACACCGACAACTCGGGCAATCCGAACC
GCAACCTGAAGCTGTCGACGGCACGCGCGCGGGCGGTGCGCGACTGGCTGATCGAGGCCTCGGGCATCCCGACCACGCAG
TTTGCCATCCAGGGCTACGGCGACACGCGACCGATCGCGAGCAACGACACGCCGGAAGGACGCGCCAGGAACCGGCGCGT
GGAAATCACGCTGGTCCCGGAGATTCCGAAGGACGGCGCCGGGAAATGA

Upstream 100 bases:

>100_bases
CAGGTCTGGCCTGCGTCGTCGCGCTAATCGTCTGGATGGTCTGGGCAGCGGCGCTCGATGTGCAGATCGCGCATCTGCTG
CCGGTAAAGGGTGGCCAGCC

Downstream 100 bases:

>100_bases
AGGAACAGGCTTTAGCCCCGAAGCGCGCGCTTCGGGATTCCGAAGCTCGGGGGCTGGCTCCGGGCGGTTGTCGCAGTACA
TGAAAAGGAGTGAAGCAATG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MKPDLPVLPATPARDPDDGHEGLGYPFRMMIVFAAALALAVVWLVLPLGRGAIWALTAVIGIVVLALTGWFTRRLSRARE
QSAHVLAALGAATADIPVRLRIRMPLVLITGDGLPALFNLTEAERFAHVGDGAIWLRVDRPQDLPRLAVAVRQWRDGRVP
DGVVLCVAPALHAGPDVLTQKLRLVRQAVADAARTLGARLPGYVAVYQRLTAGEGSDVPHAIPGLAAAASANRAASQWYG
VSSATRLVDAERFEPVIRAAEEAVQHASGDRLAATRAAALASIVGWTQRVVIGALTDRQQPAAPWALFGAGWIDCGPANA
VGMSVDRGTGNPWQRDVEMQTRVEPADAEASALPWPFPQPLLAAMPRRLWVSPRMTAFAHALALAACAAAVAFWASAKNN
EALLNRIGADLGRYSTVPPAHDAAKRDALEALIADRDQLDRYARTGVPLRLSFGMYRGARLMPALNDAIASYVPPPPPPA
VVTLDSMSLFDSGRSQLKPGSTRAMVGALEMIKAHPDKRILVAGYTDNSGNPNRNLKLSTARARAVRDWLIEASGIPTTQ
FAIQGYGDTRPIASNDTPEGRARNRRVEITLVPEIPKDGAGK

Sequences:

>Translated_602_residues
MKPDLPVLPATPARDPDDGHEGLGYPFRMMIVFAAALALAVVWLVLPLGRGAIWALTAVIGIVVLALTGWFTRRLSRARE
QSAHVLAALGAATADIPVRLRIRMPLVLITGDGLPALFNLTEAERFAHVGDGAIWLRVDRPQDLPRLAVAVRQWRDGRVP
DGVVLCVAPALHAGPDVLTQKLRLVRQAVADAARTLGARLPGYVAVYQRLTAGEGSDVPHAIPGLAAAASANRAASQWYG
VSSATRLVDAERFEPVIRAAEEAVQHASGDRLAATRAAALASIVGWTQRVVIGALTDRQQPAAPWALFGAGWIDCGPANA
VGMSVDRGTGNPWQRDVEMQTRVEPADAEASALPWPFPQPLLAAMPRRLWVSPRMTAFAHALALAACAAAVAFWASAKNN
EALLNRIGADLGRYSTVPPAHDAAKRDALEALIADRDQLDRYARTGVPLRLSFGMYRGARLMPALNDAIASYVPPPPPPA
VVTLDSMSLFDSGRSQLKPGSTRAMVGALEMIKAHPDKRILVAGYTDNSGNPNRNLKLSTARARAVRDWLIEASGIPTTQ
FAIQGYGDTRPIASNDTPEGRARNRRVEITLVPEIPKDGAGK
>Mature_602_residues
MKPDLPVLPATPARDPDDGHEGLGYPFRMMIVFAAALALAVVWLVLPLGRGAIWALTAVIGIVVLALTGWFTRRLSRARE
QSAHVLAALGAATADIPVRLRIRMPLVLITGDGLPALFNLTEAERFAHVGDGAIWLRVDRPQDLPRLAVAVRQWRDGRVP
DGVVLCVAPALHAGPDVLTQKLRLVRQAVADAARTLGARLPGYVAVYQRLTAGEGSDVPHAIPGLAAAASANRAASQWYG
VSSATRLVDAERFEPVIRAAEEAVQHASGDRLAATRAAALASIVGWTQRVVIGALTDRQQPAAPWALFGAGWIDCGPANA
VGMSVDRGTGNPWQRDVEMQTRVEPADAEASALPWPFPQPLLAAMPRRLWVSPRMTAFAHALALAACAAAVAFWASAKNN
EALLNRIGADLGRYSTVPPAHDAAKRDALEALIADRDQLDRYARTGVPLRLSFGMYRGARLMPALNDAIASYVPPPPPPA
VVTLDSMSLFDSGRSQLKPGSTRAMVGALEMIKAHPDKRILVAGYTDNSGNPNRNLKLSTARARAVRDWLIEASGIPTTQ
FAIQGYGDTRPIASNDTPEGRARNRRVEITLVPEIPKDGAGK

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential). Cell inner membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=104, Percent_Identity=43.2692307692308, Blast_Score=86, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 64352; Mature: 64352

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPDLPVLPATPARDPDDGHEGLGYPFRMMIVFAAALALAVVWLVLPLGRGAIWALTAVI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GIVVLALTGWFTRRLSRAREQSAHVLAALGAATADIPVRLRIRMPLVLITGDGLPALFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCHHHHH
TEAERFAHVGDGAIWLRVDRPQDLPRLAVAVRQWRDGRVPDGVVLCVAPALHAGPDVLTQ
HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCHHHHHH
KLRLVRQAVADAARTLGARLPGYVAVYQRLTAGEGSDVPHAIPGLAAAASANRAASQWYG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCHHHHHHCC
VSSATRLVDAERFEPVIRAAEEAVQHASGDRLAATRAAALASIVGWTQRVVIGALTDRQQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAAPWALFGAGWIDCGPANAVGMSVDRGTGNPWQRDVEMQTRVEPADAEASALPWPFPQP
CCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCCH
LLAAMPRRLWVSPRMTAFAHALALAACAAAVAFWASAKNNEALLNRIGADLGRYSTVPPA
HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
HDAAKRDALEALIADRDQLDRYARTGVPLRLSFGMYRGARLMPALNDAIASYVPPPPPPA
HHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHHHHCCCCCCCCC
VVTLDSMSLFDSGRSQLKPGSTRAMVGALEMIKAHPDKRILVAGYTDNSGNPNRNLKLST
EEEECCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEH
ARARAVRDWLIEASGIPTTQFAIQGYGDTRPIASNDTPEGRARNRRVEITLVPEIPKDGA
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
GK
CC
>Mature Secondary Structure
MKPDLPVLPATPARDPDDGHEGLGYPFRMMIVFAAALALAVVWLVLPLGRGAIWALTAVI
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GIVVLALTGWFTRRLSRAREQSAHVLAALGAATADIPVRLRIRMPLVLITGDGLPALFNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCHHHHH
TEAERFAHVGDGAIWLRVDRPQDLPRLAVAVRQWRDGRVPDGVVLCVAPALHAGPDVLTQ
HHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCHHHHHH
KLRLVRQAVADAARTLGARLPGYVAVYQRLTAGEGSDVPHAIPGLAAAASANRAASQWYG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCHHHHHHCC
VSSATRLVDAERFEPVIRAAEEAVQHASGDRLAATRAAALASIVGWTQRVVIGALTDRQQ
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAAPWALFGAGWIDCGPANAVGMSVDRGTGNPWQRDVEMQTRVEPADAEASALPWPFPQP
CCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCCH
LLAAMPRRLWVSPRMTAFAHALALAACAAAVAFWASAKNNEALLNRIGADLGRYSTVPPA
HHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC
HDAAKRDALEALIADRDQLDRYARTGVPLRLSFGMYRGARLMPALNDAIASYVPPPPPPA
HHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCHHCCCHHHHHHHHHHHHCCCCCCCCC
VVTLDSMSLFDSGRSQLKPGSTRAMVGALEMIKAHPDKRILVAGYTDNSGNPNRNLKLST
EEEECCHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEH
ARARAVRDWLIEASGIPTTQFAIQGYGDTRPIASNDTPEGRARNRRVEITLVPEIPKDGA
HHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC
GK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2180922 [H]