Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024504

Identifier: 238024504

GI number: 238024504

Start: 1416231

End: 1416962

Strand: Direct

Name: 238024504

Synonym: bglu_2g11070

Alternate gene names: NA

Gene position: 1416231-1416962 (Clockwise)

Preceding gene: 238024503

Following gene: 238024505

Centisome position: 50.09

GC content: 62.7

Gene sequence:

>732_bases
ATGAACACCCTGACGCCAGATCATAACGACGTCACCCCGATGGACGATCTGCCTGGCTCCAGCCGTGTGTCTGGCGCAGG
TATGCGTGACTTGCTGCGCGATACGGGCCTTCTCGTGACGACACTTGCGCCTGGAGGCCGGGTTCAGGACGCTGCCGGGC
TCCGGGAACGTTGCCGGCAGCTCATCACGAATTTTTCGGACGCGTTGGCGCGACGCGGCTATCCGGACGACGTCCGACAG
GATGCACTTATCGCACAGTGTGGCCTGCTAGACGAGACCGCACTGCGCTATTTGCCGGCCGAAAGCCGCGCGGCCTGGCA
ATTGAAGCCTTTACAGGTCGAACAGTTCAACCTGCATGATGCAGGCGAACGCGTAATCGAACGTCTGGAAGCGCGTATGC
GCGAAGCCTCACCCAACCTCGACCTGCTCGAGTGTTACTCGGCGATCCTCGGCATGGGATTCGTGGGACGCTATGCCCGC
GAAGGCGAAGCGAAGCGCACGGCGCTGGTCACATCACTGAACACCCAGTTGGAGACGCTTCGGCCTTCGTCGGCGCGGCC
CTTCATGACCGACCGCGCGGGAAGACGGCTCTCCGACTGGTTCTACTGGCTTTCGCCGTGGGCAATAGCAGGTCTGGCCT
GCGTCGTCGCGCTAATCGTCTGGATGGTCTGGGCAGCGGCGCTCGATGTGCAGATCGCGCATCTGCTGCCGGTAAAGGGT
GGCCAGCCGTGA

Upstream 100 bases:

>100_bases
GCGCTGCGCACGCGGAGATGCTCGCCGCGCGGGCCTGCCAGATCTATCTTCCCGCGTCCGTACCCGACGCCTCGCTTGAA
CTTTACGCGGTGCTGCGCTC

Downstream 100 bases:

>100_bases
AGCCCGACCTGCCGGTTCTGCCCGCCACGCCGGCGCGCGATCCTGATGACGGACACGAAGGGCTCGGTTATCCGTTTCGG
ATGATGATCGTGTTCGCCGC

Product: type IV / VI secretion system protein, DotU family

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNTLTPDHNDVTPMDDLPGSSRVSGAGMRDLLRDTGLLVTTLAPGGRVQDAAGLRERCRQLITNFSDALARRGYPDDVRQ
DALIAQCGLLDETALRYLPAESRAAWQLKPLQVEQFNLHDAGERVIERLEARMREASPNLDLLECYSAILGMGFVGRYAR
EGEAKRTALVTSLNTQLETLRPSSARPFMTDRAGRRLSDWFYWLSPWAIAGLACVVALIVWMVWAAALDVQIAHLLPVKG
GQP

Sequences:

>Translated_243_residues
MNTLTPDHNDVTPMDDLPGSSRVSGAGMRDLLRDTGLLVTTLAPGGRVQDAAGLRERCRQLITNFSDALARRGYPDDVRQ
DALIAQCGLLDETALRYLPAESRAAWQLKPLQVEQFNLHDAGERVIERLEARMREASPNLDLLECYSAILGMGFVGRYAR
EGEAKRTALVTSLNTQLETLRPSSARPFMTDRAGRRLSDWFYWLSPWAIAGLACVVALIVWMVWAAALDVQIAHLLPVKG
GQP
>Mature_243_residues
MNTLTPDHNDVTPMDDLPGSSRVSGAGMRDLLRDTGLLVTTLAPGGRVQDAAGLRERCRQLITNFSDALARRGYPDDVRQ
DALIAQCGLLDETALRYLPAESRAAWQLKPLQVEQFNLHDAGERVIERLEARMREASPNLDLLECYSAILGMGFVGRYAR
EGEAKRTALVTSLNTQLETLRPSSARPFMTDRAGRRLSDWFYWLSPWAIAGLACVVALIVWMVWAAALDVQIAHLLPVKG
GQP

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26871; Mature: 26871

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLTPDHNDVTPMDDLPGSSRVSGAGMRDLLRDTGLLVTTLAPGGRVQDAAGLRERCRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
LITNFSDALARRGYPDDVRQDALIAQCGLLDETALRYLPAESRAAWQLKPLQVEQFNLHD
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCCHHHCCCHH
AGERVIERLEARMREASPNLDLLECYSAILGMGFVGRYAREGEAKRTALVTSLNTQLETL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
RPSSARPFMTDRAGRRLSDWFYWLSPWAIAGLACVVALIVWMVWAAALDVQIAHLLPVKG
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GQP
CCC
>Mature Secondary Structure
MNTLTPDHNDVTPMDDLPGSSRVSGAGMRDLLRDTGLLVTTLAPGGRVQDAAGLRERCRQ
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH
LITNFSDALARRGYPDDVRQDALIAQCGLLDETALRYLPAESRAAWQLKPLQVEQFNLHD
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCCHHHCCCHH
AGERVIERLEARMREASPNLDLLECYSAILGMGFVGRYAREGEAKRTALVTSLNTQLETL
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC
RPSSARPFMTDRAGRRLSDWFYWLSPWAIAGLACVVALIVWMVWAAALDVQIAHLLPVKG
CCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GQP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA