Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238024500

Identifier: 238024500

GI number: 238024500

Start: 1409841

End: 1412201

Strand: Reverse

Name: 238024500

Synonym: bglu_2g11030

Alternate gene names: NA

Gene position: 1412201-1409841 (Counterclockwise)

Preceding gene: 238024501

Following gene: 238024499

Centisome position: 49.95

GC content: 62.43

Gene sequence:

>2361_bases
ATGTCGTCGATCCTGCCTACCCAGGCCTACGAGTTGAAGCTCGCACCGCATCCGGCGCCGTTCTCGGTGCTCGAGTTCAG
CGGCCGGGACGCCGTGAGCGAGCTGTATCACTACGACATCGAGTTCACCAGCCCGGCAGCGGGCATCCCGATGGAGCAGG
TGGTCGGCCGGCCCGCGAGATTCACCATCGCTCCGATTGACCCGAACATGGGCTACCTGCGCAAGATGTTCGGTGAGAAC
GCGGAGCAGTTCAGCAAGATGCCGCCCGCGCACACCATCCACGGCATCATCACGGAATTCGATGAATTCGCCACGACGGC
CGACCAGACGCACTACCGGGTGCGGCTCGAGCCGGTGCTCGCCGACCTGCACCGGGGCGTGACGAGCCGGCTGTTCCAGA
AGCAGTCGATCGAGGAAATCGTGACCGACACGCTGCGCCATTACGGCTACCGCGTCGGCGTCGACTTCGTGTTCCAACTG
CGCCACCAGTACAAGCGGCACGAATACGTGACGCAGTACCACGAGACCACGTTTGCCTTCATCCAGCGCCTCTGTGCGCA
GGAGGGCATCTGGTTCCGCTGGGAGCAGAAGAAGGATCACGCGGTGATCGTGTTCGGCGACGATCTCGATGCCTATGCAC
GCAAACAGCGCACGGTGCCTTACCTGCGAGACGCCGGACTCGAGAGCTCAGGCGCGGACACGATCAAGACGCTAGAAAAG
CGGACCCGGCGCGTACCCGAAGCCGTGCGGTTGCACGACTACAACCATCGCGAGGCGGGCGTATCGCTGCTCGTCGAGGA
AAACGCCGCGCGTGCCGACAAGTCGACGAACGGTGTCGACTACCGCTGGGGCGAGCATTACGAAACGCCGGAGGAGGGCA
GGCAGATCGCCCGCCGGCGCCATGAGGCGTATCTGGCGAACCAGATCACCTTCAAGGGCACCGGCAATCCGTTCTGGCTG
GAGGCGGGCGAAGTCATGCGTGTCGAGCCGGTCCAGGCCGACGCGAAGCACGGGATCTTCATCACCGCGGTGGAATCGAG
CGGCGGCCGTAGCCAATCGTACTGGGTGAGCTTCGAGGGGATTCCGTCCGATCGCGCGTATCGAACGCCGATCGCCTCGA
TCAAGCGACCGGCCATTGACGGCATCCTGCCGGCCCGCATTACATCGCCGGGCAACTACAAATACGCGTACCTGACCGAG
CAGGGCTGGTACGTGATCAAGCTGCCGTTCGACCTCGACGAGTGGAGTCCGGGCGGTACGAGCCGGCCGGTGCGGTTTGC
CAAGCCGTACAGCGGGGACAGCTACGGGCACCACTTCCCGCTGATCGACGGTGCGGAAGTCGCCATCGTCTTTACCGATG
GCAATCCGGACCGGCCCGTGATCATCGGGGCCATGCACGACAGCCTGCATCCGGATCTTGTCAATAACCTCAATCACACC
CGCAACATCGTTCGCACCGCGGCGCAGAACGAGCTGCGGATGGAGGATAAGGAAAACGTCGAGCACATCCACCTGACGAC
GCCGTTCCAGACCAGTGAGCTCAATCTCGGGCACATGGTCGATGGGGACCGCAAGGAACGCGGACAAGGCGCGGAATTGC
GGACTGACGAGCGTGTGGCGGTGCGTGGCGCGAAGGGTGTTTTTATTTCGGCGGATGCCCAGTACGCCGCGCGCGGCAAG
CAGCTCGACATGGAGCCGGCCCAAGGACTCCTCGAACAGGCGCTACAGCAGATGCAATCGCTGGCCGGCGCGGCGAAAGC
TTCTCAGGCGATCGCTGCCGATTACGAGAAGCAGAAGGCATTATTCGACAAGACCCTGAACGAACTCAGGAAGGCAGGCA
TCCTCGTCAGCGCACCGGCGGGTGTTGGTCTCGTATCGGGGGACCACATGCAGTTCAGTGCCGACCAGAATCTCATTGCC
ACGGCGGGAGGCAACGCTGATTTTGGGATCATCAAGCGCTTTACCGTCGCTGCCGGGGAAGCGGTTTCCGTGTTCGCCCA
GAAGCTCGGCCTGAAATTCGTTGCGGCGAAGGGGAAGGTCGAAATTCACGCCCAGACGGACGAAATCGACATGGCTGCCA
TGAAGGACATCACGATTTCGAGCGCCGAGGGGCGGCTCGTAATTTCGGCAGCCAAGGAGGTCTGGATCGGGGCGGGTGGC
TCGTACATCAAGATCAACGCAAATCGCATCGAGAACGGTACGCCAGGCGATATTCTCGAAAAGTGCGCATCGTGGGACAA
GCCGGGCGCATCTTCAATGCGTTTGCCTGCACCGGACCTGCAGTCCGGAGATATCAAGGGGTGTTCATGGCGATCGGCAG
CCGCGGCGGCCGATAGTGCAGCAACCGTGGTGCTGGAGTAA

Upstream 100 bases:

>100_bases
TAAGCCGCGCTGATCCGCCCAGTTCAGTGCATCAGCCGCCGGGGCCATGAAGGCTCCGGCGGTGCGGTTCGTATTTGTGC
CTGCTCAACGGAGTTTCCGC

Downstream 100 bases:

>100_bases
GGTGGCCATGAACTCGGCACACGAAACGGTCACACCGGTAGCCGGTACCCAGAGCGGTGACCAGCTGATCGAGACCCTGC
GCAACGTAGTCAAGACGCAC

Product: Htype VI secretion system Vgr family protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; VgrG Protein; Vgr-Related Protein; Rhs Accessory Genetic Element; Vgr Related Protein; Rhs Family Protein; VGR-Like Protein; RHS Accessory Genetic Element; Rhs-Family Protein; Replication/Virulence Associated Protein; Type VI Secretion System Rhs Element Vgr Protein; VGR-Related Type VI Secretion System Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Protein VgrE; VrgG Protein; Rhs Element Vgr Related Protein

Number of amino acids: Translated: 786; Mature: 785

Protein sequence:

>786_residues
MSSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPARFTIAPIDPNMGYLRKMFGEN
AEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVLADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQL
RHQYKRHEYVTQYHETTFAFIQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRRHEAYLANQITFKGTGNPFWL
EAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEGIPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTE
QGWYVIKLPFDLDEWSPGGTSRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDERVAVRGAKGVFISADAQYAARGK
QLDMEPAQGLLEQALQQMQSLAGAAKASQAIAADYEKQKALFDKTLNELRKAGILVSAPAGVGLVSGDHMQFSADQNLIA
TAGGNADFGIIKRFTVAAGEAVSVFAQKLGLKFVAAKGKVEIHAQTDEIDMAAMKDITISSAEGRLVISAAKEVWIGAGG
SYIKINANRIENGTPGDILEKCASWDKPGASSMRLPAPDLQSGDIKGCSWRSAAAAADSAATVVLE

Sequences:

>Translated_786_residues
MSSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPARFTIAPIDPNMGYLRKMFGEN
AEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVLADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQL
RHQYKRHEYVTQYHETTFAFIQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRRHEAYLANQITFKGTGNPFWL
EAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEGIPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTE
QGWYVIKLPFDLDEWSPGGTSRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDERVAVRGAKGVFISADAQYAARGK
QLDMEPAQGLLEQALQQMQSLAGAAKASQAIAADYEKQKALFDKTLNELRKAGILVSAPAGVGLVSGDHMQFSADQNLIA
TAGGNADFGIIKRFTVAAGEAVSVFAQKLGLKFVAAKGKVEIHAQTDEIDMAAMKDITISSAEGRLVISAAKEVWIGAGG
SYIKINANRIENGTPGDILEKCASWDKPGASSMRLPAPDLQSGDIKGCSWRSAAAAADSAATVVLE
>Mature_785_residues
SSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPARFTIAPIDPNMGYLRKMFGENA
EQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVLADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQLR
HQYKRHEYVTQYHETTFAFIQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEKR
TRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRRHEAYLANQITFKGTGNPFWLE
AGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEGIPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTEQ
GWYVIKLPFDLDEWSPGGTSRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHTR
NIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDERVAVRGAKGVFISADAQYAARGKQ
LDMEPAQGLLEQALQQMQSLAGAAKASQAIAADYEKQKALFDKTLNELRKAGILVSAPAGVGLVSGDHMQFSADQNLIAT
AGGNADFGIIKRFTVAAGEAVSVFAQKLGLKFVAAKGKVEIHAQTDEIDMAAMKDITISSAEGRLVISAAKEVWIGAGGS
YIKINANRIENGTPGDILEKCASWDKPGASSMRLPAPDLQSGDIKGCSWRSAAAAADSAATVVLE

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87011; Mature: 86880

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPAR
CCCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHCCEEECCCCCCCCHHHHCCCCCE
FTIAPIDPNMGYLRKMFGENAEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVL
EEEEECCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
ADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQLRHQYKRHEYVTQYHETTFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
HHHHHHCCCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHH
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRR
HHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HEAYLANQITFKGTGNPFWLEAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEG
HHHHHHHCEEEECCCCEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEC
IPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTEQGWYVIKLPFDLDEWSPGGT
CCCCCCCCCCHHHHCCCCCCCCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCC
SRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
CCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHH
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDERVA
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE
VRGAKGVFISADAQYAARGKQLDMEPAQGLLEQALQQMQSLAGAAKASQAIAADYEKQKA
EECCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDKTLNELRKAGILVSAPAGVGLVSGDHMQFSADQNLIATAGGNADFGIIKRFTVAAGE
HHHHHHHHHHHCCEEEECCCCCEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHCCH
AVSVFAQKLGLKFVAAKGKVEIHAQTDEIDMAAMKDITISSAEGRLVISAAKEVWIGAGG
HHHHHHHHHCCEEEEECCEEEEEEECCCCCHHHHHCEEEECCCCEEEEEECCEEEEECCC
SYIKINANRIENGTPGDILEKCASWDKPGASSMRLPAPDLQSGDIKGCSWRSAAAAADSA
CEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
ATVVLE
EEEEEC
>Mature Secondary Structure 
SSILPTQAYELKLAPHPAPFSVLEFSGRDAVSELYHYDIEFTSPAAGIPMEQVVGRPAR
CCCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHCCEEECCCCCCCCHHHHCCCCCE
FTIAPIDPNMGYLRKMFGENAEQFSKMPPAHTIHGIITEFDEFATTADQTHYRVRLEPVL
EEEEECCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHH
ADLHRGVTSRLFQKQSIEEIVTDTLRHYGYRVGVDFVFQLRHQYKRHEYVTQYHETTFAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQRLCAQEGIWFRWEQKKDHAVIVFGDDLDAYARKQRTVPYLRDAGLESSGADTIKTLEK
HHHHHHCCCCEEEEECCCCCEEEEECCCHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHH
RTRRVPEAVRLHDYNHREAGVSLLVEENAARADKSTNGVDYRWGEHYETPEEGRQIARRR
HHHHCCHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
HEAYLANQITFKGTGNPFWLEAGEVMRVEPVQADAKHGIFITAVESSGGRSQSYWVSFEG
HHHHHHHCEEEECCCCEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEEC
IPSDRAYRTPIASIKRPAIDGILPARITSPGNYKYAYLTEQGWYVIKLPFDLDEWSPGGT
CCCCCCCCCCHHHHCCCCCCCCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCCCCCCC
SRPVRFAKPYSGDSYGHHFPLIDGAEVAIVFTDGNPDRPVIIGAMHDSLHPDLVNNLNHT
CCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCHHHHHHHHHH
RNIVRTAAQNELRMEDKENVEHIHLTTPFQTSELNLGHMVDGDRKERGQGAELRTDERVA
HHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEE
VRGAKGVFISADAQYAARGKQLDMEPAQGLLEQALQQMQSLAGAAKASQAIAADYEKQKA
EECCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFDKTLNELRKAGILVSAPAGVGLVSGDHMQFSADQNLIATAGGNADFGIIKRFTVAAGE
HHHHHHHHHHHCCEEEECCCCCEEECCCCEEECCCCCEEEECCCCCCHHHHHHHHHHCCH
AVSVFAQKLGLKFVAAKGKVEIHAQTDEIDMAAMKDITISSAEGRLVISAAKEVWIGAGG
HHHHHHHHHCCEEEEECCEEEEEEECCCCCHHHHHCEEEECCCCEEEEEECCEEEEECCC
SYIKINANRIENGTPGDILEKCASWDKPGASSMRLPAPDLQSGDIKGCSWRSAAAAADSA
CEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
ATVVLE
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA