| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024499
Identifier: 238024499
GI number: 238024499
Start: 1408880
End: 1409833
Strand: Reverse
Name: 238024499
Synonym: bglu_2g11020
Alternate gene names: NA
Gene position: 1409833-1408880 (Counterclockwise)
Preceding gene: 238024500
Following gene: 238024498
Centisome position: 49.86
GC content: 60.59
Gene sequence:
>954_bases ATGAACTCGGCACACGAAACGGTCACACCGGTAGCCGGTACCCAGAGCGGTGACCAGCTGATCGAGACCCTGCGCAACGT AGTCAAGACGCACGGAGACAAGTGTTACCTGGTCGTCGATCCGTCGTTGCGCTCGCTTGAGGACATTCCGGCCGGAGGAG TCCTCTTCAGCCAGGCGAAGCGCGCTTCGGTCCCAATTGGACACAACGCCTTTGCGCCGGAACATTGGCCTTGCCTGATC GAATTGGATCTCTCGACGGCGACCGGTCCAGCGCTTCTCGCGGAAAGCGTGCGAGCAGCCCTTGCGGACCGTCTGCCGGA ATCCATTGCTCGCGGACAAGGGCAGCGGGTTGGAGGCTGGCTTGTCGGCGCAGATTCATTGCAAGAGGCGGTCGATCATT GGTCGACCAGTCTCCTACACTTTGACAACCTGGGACGTCAGTGCCTGCTGCGTTTCTACGACACACGCGTGCTGGCGCTG ATGTGGCCAGCTCTCTCATCCACGCAGCGTCGGCGTCTGCTCGGTCCGGTCCAGACTTGGTATGCCCTCGACGCATGCGC CGAACTCGTAGCCTACACCGCGCCAGACGGCTCGCAGTTCGATCTGGAGATTGACGACGCACAATGGATCGAATTTCATC GGCACGGAATCATCAACCGAGCACTGGCATTGTTCATGAATGATGCGGGGCGCCAGCCGATGCGACAGGAAGTTCAGGCA GCAGTGGATAGTGCTGGCCGCGCCGAACAACACGGTCTGAGAGACCACGAGGACAAGATCGCGTTCGTGGGCCATGCCCT GGCCTGGCACCCCTGCTTCGACGCGCATCCCGCGATGGTGCCCATCTTAGAAAAGGTTTCCCGGGGAGCCACTTACGGCG CAGCAGTGAGTGAACTGGATTCCCGTGCGGTGGATGAGATCCGGCGCGGGACTTGGTTCAAGTCGCATCAATAA
Upstream 100 bases:
>100_bases GCACCGGACCTGCAGTCCGGAGATATCAAGGGGTGTTCATGGCGATCGGCAGCCGCGGCGGCCGATAGTGCAGCAACCGT GGTGCTGGAGTAAGGTGGCC
Downstream 100 bases:
>100_bases CCGGGCATCGTGCAACACAGCCCACTCCGACACACCTGTACGCATACAGATATGGCAACGAACTCTAACCCTCCCTGCAA GAACTGCGAAAAGGGTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MNSAHETVTPVAGTQSGDQLIETLRNVVKTHGDKCYLVVDPSLRSLEDIPAGGVLFSQAKRASVPIGHNAFAPEHWPCLI ELDLSTATGPALLAESVRAALADRLPESIARGQGQRVGGWLVGADSLQEAVDHWSTSLLHFDNLGRQCLLRFYDTRVLAL MWPALSSTQRRRLLGPVQTWYALDACAELVAYTAPDGSQFDLEIDDAQWIEFHRHGIINRALALFMNDAGRQPMRQEVQA AVDSAGRAEQHGLRDHEDKIAFVGHALAWHPCFDAHPAMVPILEKVSRGATYGAAVSELDSRAVDEIRRGTWFKSHQ
Sequences:
>Translated_317_residues MNSAHETVTPVAGTQSGDQLIETLRNVVKTHGDKCYLVVDPSLRSLEDIPAGGVLFSQAKRASVPIGHNAFAPEHWPCLI ELDLSTATGPALLAESVRAALADRLPESIARGQGQRVGGWLVGADSLQEAVDHWSTSLLHFDNLGRQCLLRFYDTRVLAL MWPALSSTQRRRLLGPVQTWYALDACAELVAYTAPDGSQFDLEIDDAQWIEFHRHGIINRALALFMNDAGRQPMRQEVQA AVDSAGRAEQHGLRDHEDKIAFVGHALAWHPCFDAHPAMVPILEKVSRGATYGAAVSELDSRAVDEIRRGTWFKSHQ >Mature_317_residues MNSAHETVTPVAGTQSGDQLIETLRNVVKTHGDKCYLVVDPSLRSLEDIPAGGVLFSQAKRASVPIGHNAFAPEHWPCLI ELDLSTATGPALLAESVRAALADRLPESIARGQGQRVGGWLVGADSLQEAVDHWSTSLLHFDNLGRQCLLRFYDTRVLAL MWPALSSTQRRRLLGPVQTWYALDACAELVAYTAPDGSQFDLEIDDAQWIEFHRHGIINRALALFMNDAGRQPMRQEVQA AVDSAGRAEQHGLRDHEDKIAFVGHALAWHPCFDAHPAMVPILEKVSRGATYGAAVSELDSRAVDEIRRGTWFKSHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34866; Mature: 34866
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSAHETVTPVAGTQSGDQLIETLRNVVKTHGDKCYLVVDPSLRSLEDIPAGGVLFSQAK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCHHHHHHH RASVPIGHNAFAPEHWPCLIELDLSTATGPALLAESVRAALADRLPESIARGQGQRVGGW HCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LVGADSLQEAVDHWSTSLLHFDNLGRQCLLRFYDTRVLALMWPALSSTQRRRLLGPVQTW EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YALDACAELVAYTAPDGSQFDLEIDDAQWIEFHRHGIINRALALFMNDAGRQPMRQEVQA HHHHHHHHHHEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AVDSAGRAEQHGLRDHEDKIAFVGHALAWHPCFDAHPAMVPILEKVSRGATYGAAVSELD HHHCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH SRAVDEIRRGTWFKSHQ HHHHHHHHHCCCCCCCC >Mature Secondary Structure MNSAHETVTPVAGTQSGDQLIETLRNVVKTHGDKCYLVVDPSLRSLEDIPAGGVLFSQAK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCCCHHHHHHH RASVPIGHNAFAPEHWPCLIELDLSTATGPALLAESVRAALADRLPESIARGQGQRVGGW HCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE LVGADSLQEAVDHWSTSLLHFDNLGRQCLLRFYDTRVLALMWPALSSTQRRRLLGPVQTW EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YALDACAELVAYTAPDGSQFDLEIDDAQWIEFHRHGIINRALALFMNDAGRQPMRQEVQA HHHHHHHHHHEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH AVDSAGRAEQHGLRDHEDKIAFVGHALAWHPCFDAHPAMVPILEKVSRGATYGAAVSELD HHHCCCCHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH SRAVDEIRRGTWFKSHQ HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA