| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024498
Identifier: 238024498
GI number: 238024498
Start: 1405979
End: 1408828
Strand: Reverse
Name: 238024498
Synonym: bglu_2g11010
Alternate gene names: NA
Gene position: 1408828-1405979 (Counterclockwise)
Preceding gene: 238024499
Following gene: 238024497
Centisome position: 49.83
GC content: 56.53
Gene sequence:
>2850_bases ATGGCAACGAACTCTAACCCTCCCTGCAAGAACTGCGAAAAGGGTGGTCTGCCGATCCTGCCGGTTCGCTACACGGTCCT GCCGAAGACTGTTTCCGCGAAATTTCCTGCCGGCATCACGGGGGAGGGTATCACTGGCGTTACGCTGACCCAGCACAACT ATGGCTTGCGTACCCTACGCGAAGGCTGGCTGTATCTCTTCTATTCCCAGGGGCCGCGTGGGAAAAACTACTGGGAGGCC TATCGGATTACCGCGGACGGCCGCCTCTGGAAGCAATCGATCCCGCTGCCTGTCGTTCCGGTTAAGCATCCGGCCTGTGC GAAGTCTGGTCACGCTGTACCAATGGATATCATTGCCATCGAGCAACCGGAGCTGTGCACGGAAGTCTATATCGCGTTCT CCGAACATAGCTGGCACACGAAGATCTTTGATCTTTACGCTCAGAACGCAACACTGCGCAAGGAGCGGATGCAGTGTATC GAACCAGCGAAATGGATTGCTGGTGGTACCAACAAACATGCGGCGATCGCAACCGAGCAGAGCGTCGATGCCATCGTCGA GTATATGCCTGGCTTCAACCCCGCGTTGCTGAAGCCTTCGATGACGCAGACGCTCAGTGACGAAACAGGGCGCTACAACC CGCAGCTCGTTAAACGTGAGGCCACTCGCTATGCGCTTCACATCCGTCAGGCGACACCTGATTCGGCAAGTAAAGCGCTG GTCGATATGATGCACGACGTCGGCAAGATCTCCGCGGCCCGGCACTATCCCCCGATGGTGCTCGCGTTGTGGGATGCGAT TGGAAACGTGCATGAACTGAATGGATTCCGAAACGATGCCGGCAGTATGCTCGGCATTTACGTGCGCGAGCGCGCAGTGC AGATCGATGCCATGCAGTCGATCGACGCGGCCGAAGTCGCGGTACGCAACGGGGCGGTAGCTTTCAAGAGCAAACTGCGC TCCGCCATGCAGGCGGGCATTGAAGGTCTGATGCAGTCGGGCGGTGGGGATCTTCCAGTGTTGCAGACGCCGGAACAGAT GGAAGCGTCCCAGCGTCGTATTGAGCAGGCCGGTGTCGTCAGCCCCTCGGAAGCCAAGGCGATCGGCGAAGCGGAGTGGC CGAAGTACCTGAAGAAGCTGAATCCATCCAAACTCGCATCGTTCCGGCCGTGGTTCGCATCTGTGCAAACGGCCGTCGCC GCGATACAGGCGAACCGTAGCGCGGACGTGGGCGCATGGTTGAAGGCCCCGTTGCTGTTGACGACACTGCACGATTACTA CGAGGAGGACGTTCGGGACGGTAAGGCGTTCGAGACCGTCGTGAGCGAGGCGATCTCGGGCTTGCCGTCGGAAGCAAAGG GCGAAAAGCTGGTGTCCGATCTCGTCGACAACATGGATCCCACTCATCCTGCGAGCCTGGTGTGGCGCGCGTTCGCTGGC AATCAGAAGCAGCCCAAGATCGAAATCAAGCAACTGTTGGCCGACGTGTCGAAGTATAAGGCCACGCCCATGGAGGTGAC CGCCGAATGGGCCGAAAAAATCGCAAAGTCACTTGAGAAGGTCAAGACGTTCTGGGAATTCTGGGAAAAGATGAAGGAGG TGAAGGAGCATGAGAATCCGATTTCCAAGACTGAAGCCGGACTCAAGGCCCTTCACATCGACAAGCTGATGACCGCCATC GCCCCGTCGCTGTTCAAGTGGACCGGATTCGGGCTGGTGGGCAATTGTGCAGGTACCTACCTGCTTCGCGGGGCGATGTT GATGCGCGTCGGCATTAGTCACGCCGACGCAATCGAGCTCGTGAAAGCGGCGGTCAGGACCGAGTTGCCGATGTTCAACA AGCTGAAGGCGGATTTTCTCGCGCTGCGTCTGCGTGGTATTCCTGCCGCTAACGCGTATGCTCAGGCGCTGGATAATCTG GCCTCCGATGAACGTGGCCAGTTGCTTCGTGCGAAGTGGAATGCCGTTAGGGTAACGTCGGAAGGAGCAGAAGCAGCCGG TGCGGTTCGGCTTGCGGGCACACTCGCATTCATTGAGGTGGTGTCCTTCGCTGCTGCACTCTCAAAGACTGACAAGTCCG ACGAGGACTACGCATCGCTGGTTGCGAGCGGATTTTCTGCGACATCGGCATGTCTCGATGTTTCTACGAGAGCGGTGACG GCGCTTGCAGAGGACGCAGCGCGAACGCTGGCCAATCTCAAGGCAGTAACGGGATATCTCAGCGGTGCATCTTCGTTGAT CGGTGCGGTGTTGGATGTGCGATCAGGCAACAAAGAGGCGGATAATGGGCGCATGGCATTAGAATCCATGTATTATATAA AGAGCTTATTGGGATTCGTGGCATTTGGTACGAATTTATTGACCGCCATGACTTCGTCGGCACCTTTAATTGCGCGAATC ACTGGTGGACGCGGGATCGTCTGGGTTGGCAAGGCCGGAGCAGGAATTTCAGGAGCCACTGCATATACGAACGAAGTCGC CAAACCAATCATTGAAAGTGTTACGGCAAGAGAAAGAGACGCGGCAGTTAAGAAGGCGGCGAATATTGCATTTGATTCCG CACTGAAAAATGTAGCAACAGATGTTGCAGTAGCCACGGGTGAAAGAGCTTTCTTGATAAGCGCTGGTCGTGTCGTGCTT TTCCTGGCAGGTTGGGAAGTTGCTGCCGCCGCTACGCTGATTCAGTTTTTAATCTGGTACCTCTCGGACAACGGCCTGCA AACGTGGATGGAGAAGTGCTGGTTTGGGCGATCACCGAACTCCCCAGTGTGGTCGGCAGGAAAACAACACGAGGAGTTTC AGAAGGCGTTGAGCTCGAGTGAGCTTCAAGTAAATGAGGGTTTGGAATGA
Upstream 100 bases:
>100_bases TGCGGTGGATGAGATCCGGCGCGGGACTTGGTTCAAGTCGCATCAATAACCGGGCATCGTGCAACACAGCCCACTCCGAC ACACCTGTACGCATACAGAT
Downstream 100 bases:
>100_bases ACGCGATCACGACCGATATATCCACGACGCATCTATTGCACGGGCGTATCCAAAATCTGAGGAAAACACGCCTGAATCAT GATTTCTTTTTCGATGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 949; Mature: 948
Protein sequence:
>949_residues MATNSNPPCKNCEKGGLPILPVRYTVLPKTVSAKFPAGITGEGITGVTLTQHNYGLRTLREGWLYLFYSQGPRGKNYWEA YRITADGRLWKQSIPLPVVPVKHPACAKSGHAVPMDIIAIEQPELCTEVYIAFSEHSWHTKIFDLYAQNATLRKERMQCI EPAKWIAGGTNKHAAIATEQSVDAIVEYMPGFNPALLKPSMTQTLSDETGRYNPQLVKREATRYALHIRQATPDSASKAL VDMMHDVGKISAARHYPPMVLALWDAIGNVHELNGFRNDAGSMLGIYVRERAVQIDAMQSIDAAEVAVRNGAVAFKSKLR SAMQAGIEGLMQSGGGDLPVLQTPEQMEASQRRIEQAGVVSPSEAKAIGEAEWPKYLKKLNPSKLASFRPWFASVQTAVA AIQANRSADVGAWLKAPLLLTTLHDYYEEDVRDGKAFETVVSEAISGLPSEAKGEKLVSDLVDNMDPTHPASLVWRAFAG NQKQPKIEIKQLLADVSKYKATPMEVTAEWAEKIAKSLEKVKTFWEFWEKMKEVKEHENPISKTEAGLKALHIDKLMTAI APSLFKWTGFGLVGNCAGTYLLRGAMLMRVGISHADAIELVKAAVRTELPMFNKLKADFLALRLRGIPAANAYAQALDNL ASDERGQLLRAKWNAVRVTSEGAEAAGAVRLAGTLAFIEVVSFAAALSKTDKSDEDYASLVASGFSATSACLDVSTRAVT ALAEDAARTLANLKAVTGYLSGASSLIGAVLDVRSGNKEADNGRMALESMYYIKSLLGFVAFGTNLLTAMTSSAPLIARI TGGRGIVWVGKAGAGISGATAYTNEVAKPIIESVTARERDAAVKKAANIAFDSALKNVATDVAVATGERAFLISAGRVVL FLAGWEVAAAATLIQFLIWYLSDNGLQTWMEKCWFGRSPNSPVWSAGKQHEEFQKALSSSELQVNEGLE
Sequences:
>Translated_949_residues MATNSNPPCKNCEKGGLPILPVRYTVLPKTVSAKFPAGITGEGITGVTLTQHNYGLRTLREGWLYLFYSQGPRGKNYWEA YRITADGRLWKQSIPLPVVPVKHPACAKSGHAVPMDIIAIEQPELCTEVYIAFSEHSWHTKIFDLYAQNATLRKERMQCI EPAKWIAGGTNKHAAIATEQSVDAIVEYMPGFNPALLKPSMTQTLSDETGRYNPQLVKREATRYALHIRQATPDSASKAL VDMMHDVGKISAARHYPPMVLALWDAIGNVHELNGFRNDAGSMLGIYVRERAVQIDAMQSIDAAEVAVRNGAVAFKSKLR SAMQAGIEGLMQSGGGDLPVLQTPEQMEASQRRIEQAGVVSPSEAKAIGEAEWPKYLKKLNPSKLASFRPWFASVQTAVA AIQANRSADVGAWLKAPLLLTTLHDYYEEDVRDGKAFETVVSEAISGLPSEAKGEKLVSDLVDNMDPTHPASLVWRAFAG NQKQPKIEIKQLLADVSKYKATPMEVTAEWAEKIAKSLEKVKTFWEFWEKMKEVKEHENPISKTEAGLKALHIDKLMTAI APSLFKWTGFGLVGNCAGTYLLRGAMLMRVGISHADAIELVKAAVRTELPMFNKLKADFLALRLRGIPAANAYAQALDNL ASDERGQLLRAKWNAVRVTSEGAEAAGAVRLAGTLAFIEVVSFAAALSKTDKSDEDYASLVASGFSATSACLDVSTRAVT ALAEDAARTLANLKAVTGYLSGASSLIGAVLDVRSGNKEADNGRMALESMYYIKSLLGFVAFGTNLLTAMTSSAPLIARI TGGRGIVWVGKAGAGISGATAYTNEVAKPIIESVTARERDAAVKKAANIAFDSALKNVATDVAVATGERAFLISAGRVVL FLAGWEVAAAATLIQFLIWYLSDNGLQTWMEKCWFGRSPNSPVWSAGKQHEEFQKALSSSELQVNEGLE >Mature_948_residues ATNSNPPCKNCEKGGLPILPVRYTVLPKTVSAKFPAGITGEGITGVTLTQHNYGLRTLREGWLYLFYSQGPRGKNYWEAY RITADGRLWKQSIPLPVVPVKHPACAKSGHAVPMDIIAIEQPELCTEVYIAFSEHSWHTKIFDLYAQNATLRKERMQCIE PAKWIAGGTNKHAAIATEQSVDAIVEYMPGFNPALLKPSMTQTLSDETGRYNPQLVKREATRYALHIRQATPDSASKALV DMMHDVGKISAARHYPPMVLALWDAIGNVHELNGFRNDAGSMLGIYVRERAVQIDAMQSIDAAEVAVRNGAVAFKSKLRS AMQAGIEGLMQSGGGDLPVLQTPEQMEASQRRIEQAGVVSPSEAKAIGEAEWPKYLKKLNPSKLASFRPWFASVQTAVAA IQANRSADVGAWLKAPLLLTTLHDYYEEDVRDGKAFETVVSEAISGLPSEAKGEKLVSDLVDNMDPTHPASLVWRAFAGN QKQPKIEIKQLLADVSKYKATPMEVTAEWAEKIAKSLEKVKTFWEFWEKMKEVKEHENPISKTEAGLKALHIDKLMTAIA PSLFKWTGFGLVGNCAGTYLLRGAMLMRVGISHADAIELVKAAVRTELPMFNKLKADFLALRLRGIPAANAYAQALDNLA SDERGQLLRAKWNAVRVTSEGAEAAGAVRLAGTLAFIEVVSFAAALSKTDKSDEDYASLVASGFSATSACLDVSTRAVTA LAEDAARTLANLKAVTGYLSGASSLIGAVLDVRSGNKEADNGRMALESMYYIKSLLGFVAFGTNLLTAMTSSAPLIARIT GGRGIVWVGKAGAGISGATAYTNEVAKPIIESVTARERDAAVKKAANIAFDSALKNVATDVAVATGERAFLISAGRVVLF LAGWEVAAAATLIQFLIWYLSDNGLQTWMEKCWFGRSPNSPVWSAGKQHEEFQKALSSSELQVNEGLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102840; Mature: 102709
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNSNPPCKNCEKGGLPILPVRYTVLPKTVSAKFPAGITGEGITGVTLTQHNYGLRTLR CCCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH EGWLYLFYSQGPRGKNYWEAYRITADGRLWKQSIPLPVVPVKHPACAKSGHAVPMDIIAI CCCEEEEECCCCCCCCCEEEEEEEECCCHHHHCCCCCEECCCCCCCCCCCCCCCEEEEEE EQPELCTEVYIAFSEHSWHTKIFDLYAQNATLRKERMQCIEPAKWIAGGTNKHAAIATEQ CCCHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCCCCCEEEECHH SVDAIVEYMPGFNPALLKPSMTQTLSDETGRYNPQLVKREATRYALHIRQATPDSASKAL HHHHHHHHCCCCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHH VDMMHDVGKISAARHYPPMVLALWDAIGNVHELNGFRNDAGSMLGIYVRERAVQIDAMQS HHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC IDAAEVAVRNGAVAFKSKLRSAMQAGIEGLMQSGGGDLPVLQTPEQMEASQRRIEQAGVV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC SPSEAKAIGEAEWPKYLKKLNPSKLASFRPWFASVQTAVAAIQANRSADVGAWLKAPLLL CCHHHHHCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TTLHDYYEEDVRDGKAFETVVSEAISGLPSEAKGEKLVSDLVDNMDPTHPASLVWRAFAG HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC NQKQPKIEIKQLLADVSKYKATPMEVTAEWAEKIAKSLEKVKTFWEFWEKMKEVKEHENP CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ISKTEAGLKALHIDKLMTAIAPSLFKWTGFGLVGNCAGTYLLRGAMLMRVGISHADAIEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VKAAVRTELPMFNKLKADFLALRLRGIPAANAYAQALDNLASDERGQLLRAKWNAVRVTS HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEC EGAEAAGAVRLAGTLAFIEVVSFAAALSKTDKSDEDYASLVASGFSATSACLDVSTRAVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH ALAEDAARTLANLKAVTGYLSGASSLIGAVLDVRSGNKEADNGRMALESMYYIKSLLGFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH AFGTNLLTAMTSSAPLIARITGGRGIVWVGKAGAGISGATAYTNEVAKPIIESVTARERD HHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AAVKKAANIAFDSALKNVATDVAVATGERAFLISAGRVVLFLAGWEVAAAATLIQFLIWY HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH LSDNGLQTWMEKCWFGRSPNSPVWSAGKQHEEFQKALSSSELQVNEGLE HCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ATNSNPPCKNCEKGGLPILPVRYTVLPKTVSAKFPAGITGEGITGVTLTQHNYGLRTLR CCCCCCCCCCCCCCCCCEEEEEEEECCCHHCCCCCCCCCCCCCCEEEEECCCCCHHHHH EGWLYLFYSQGPRGKNYWEAYRITADGRLWKQSIPLPVVPVKHPACAKSGHAVPMDIIAI CCCEEEEECCCCCCCCCEEEEEEEECCCHHHHCCCCCEECCCCCCCCCCCCCCCEEEEEE EQPELCTEVYIAFSEHSWHTKIFDLYAQNATLRKERMQCIEPAKWIAGGTNKHAAIATEQ CCCHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHCCCCCCCEEEECHH SVDAIVEYMPGFNPALLKPSMTQTLSDETGRYNPQLVKREATRYALHIRQATPDSASKAL HHHHHHHHCCCCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCCHHHHHH VDMMHDVGKISAARHYPPMVLALWDAIGNVHELNGFRNDAGSMLGIYVRERAVQIDAMQS HHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC IDAAEVAVRNGAVAFKSKLRSAMQAGIEGLMQSGGGDLPVLQTPEQMEASQRRIEQAGVV CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC SPSEAKAIGEAEWPKYLKKLNPSKLASFRPWFASVQTAVAAIQANRSADVGAWLKAPLLL CCHHHHHCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH TTLHDYYEEDVRDGKAFETVVSEAISGLPSEAKGEKLVSDLVDNMDPTHPASLVWRAFAG HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC NQKQPKIEIKQLLADVSKYKATPMEVTAEWAEKIAKSLEKVKTFWEFWEKMKEVKEHENP CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ISKTEAGLKALHIDKLMTAIAPSLFKWTGFGLVGNCAGTYLLRGAMLMRVGISHADAIEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VKAAVRTELPMFNKLKADFLALRLRGIPAANAYAQALDNLASDERGQLLRAKWNAVRVTS HHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCEEEEEC EGAEAAGAVRLAGTLAFIEVVSFAAALSKTDKSDEDYASLVASGFSATSACLDVSTRAVT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH ALAEDAARTLANLKAVTGYLSGASSLIGAVLDVRSGNKEADNGRMALESMYYIKSLLGFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH AFGTNLLTAMTSSAPLIARITGGRGIVWVGKAGAGISGATAYTNEVAKPIIESVTARERD HHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AAVKKAANIAFDSALKNVATDVAVATGERAFLISAGRVVLFLAGWEVAAAATLIQFLIWY HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH LSDNGLQTWMEKCWFGRSPNSPVWSAGKQHEEFQKALSSSELQVNEGLE HCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA