Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is sgaE [C]

Identifier: 238024488

GI number: 238024488

Start: 1388807

End: 1389592

Strand: Reverse

Name: sgaE [C]

Synonym: bglu_2g10870

Alternate gene names: 238024488

Gene position: 1389592-1388807 (Counterclockwise)

Preceding gene: 238024489

Following gene: 238024480

Centisome position: 49.15

GC content: 69.85

Gene sequence:

>786_bases
ATGGCCCATCAGCTCACTAGCGGCGCCGCGCCGGACGGCCGGCGCACCGGGCTCGACTCGGACGCGGTGCGGACCGCGCG
CATCGAACTCGCGGCCTGCTTTCGGCTCGCCGCGCAACACGGCTTCGAGGAAGGCATCTGCAACCATTTCTCGGCGGTGG
TGCCGGGCCATGACGACCTGTTTCTCGTGAATCCTTACGGCTACGCGTTTTCGGAGATCACCGCGTCGCGACTGCTGATC
TGCGATTACGACGGCAACGTGATCGAGGGCGAGGGCCAGCCCGAGGCCACGGCCTTATCGATCCATGCGCGGCTGCATCG
CGCGCTGCCGCGCGTGAAGGCGGCCTTCCACACCCACATGCCGAACGCGACGGCGCTGTGCCTGCTCGAAGGGCCGCCGC
TGCTGTGGCTCGGGCAAAGCGCGCTGAAATTCCATGGGCGCACCGCCGTGGACGAGCAGTACAACGGGCTCGCGCTCGAC
GCCGCGGAGGGCGACCGGATCGCGGCCGCGCTCGGCGAGGCCGACGTGCTGTTCCTGAAGAACCACGGCGTGATCGTCGC
GGGCGCGAGCATCGCCGAGGCCTGGGACGATCTCTATTACCTCGAGCGGGCGGCCGAGGTGCAGCTCAAGGCGATGCAGA
CCGGCCGCCCGCTGCAGACGGTGCCGCGCCATATCGCGCAGCGCGCCCATGAACAGATACGGCTTGGCGATCCGGCCAGC
GCGCGGGCCCACCTGGACAGCGCGCTGCGCCGGCTGCGCGCGGCCGGCAGCGATTTCGAGCAGTGA

Upstream 100 bases:

>100_bases
CGGCCCGCACCGACGAGGGCACGATCACGCCCGCACGATTTGCGTCGCCGGGTTGGTAAGCTTATGCCTTTGCGTTTCCA
GTTCCGCGGAGGACAGGCAG

Downstream 100 bases:

>100_bases
GCGATGGATGGGGGCCGGCTGCCGGGCCGGCTGGCGGCGGCAGGCTCGGTTCAGTCGAAATGGTCAGAATCGGTGCTCTG
CCGGCGGCACGCCTGCACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MAHQLTSGAAPDGRRTGLDSDAVRTARIELAACFRLAAQHGFEEGICNHFSAVVPGHDDLFLVNPYGYAFSEITASRLLI
CDYDGNVIEGEGQPEATALSIHARLHRALPRVKAAFHTHMPNATALCLLEGPPLLWLGQSALKFHGRTAVDEQYNGLALD
AAEGDRIAAALGEADVLFLKNHGVIVAGASIAEAWDDLYYLERAAEVQLKAMQTGRPLQTVPRHIAQRAHEQIRLGDPAS
ARAHLDSALRRLRAAGSDFEQ

Sequences:

>Translated_261_residues
MAHQLTSGAAPDGRRTGLDSDAVRTARIELAACFRLAAQHGFEEGICNHFSAVVPGHDDLFLVNPYGYAFSEITASRLLI
CDYDGNVIEGEGQPEATALSIHARLHRALPRVKAAFHTHMPNATALCLLEGPPLLWLGQSALKFHGRTAVDEQYNGLALD
AAEGDRIAAALGEADVLFLKNHGVIVAGASIAEAWDDLYYLERAAEVQLKAMQTGRPLQTVPRHIAQRAHEQIRLGDPAS
ARAHLDSALRRLRAAGSDFEQ
>Mature_260_residues
AHQLTSGAAPDGRRTGLDSDAVRTARIELAACFRLAAQHGFEEGICNHFSAVVPGHDDLFLVNPYGYAFSEITASRLLIC
DYDGNVIEGEGQPEATALSIHARLHRALPRVKAAFHTHMPNATALCLLEGPPLLWLGQSALKFHGRTAVDEQYNGLALDA
AEGDRIAAALGEADVLFLKNHGVIVAGASIAEAWDDLYYLERAAEVQLKAMQTGRPLQTVPRHIAQRAHEQIRLGDPASA
RAHLDSALRRLRAAGSDFEQ

Specific function: Probable Pentulose-5-Phosphate-4-Epimerase. Probably Involved In A Metabolic Pathway With Sgah And Sgau. [C]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family [H]

Homologues:

Organism=Homo sapiens, GI29826323, Length=199, Percent_Identity=30.6532663316583, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI29826325, Length=199, Percent_Identity=30.6532663316583, Blast_Score=91, Evalue=9e-19,
Organism=Homo sapiens, GI29826321, Length=199, Percent_Identity=30.6532663316583, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI29826319, Length=199, Percent_Identity=30.6532663316583, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI89276787, Length=195, Percent_Identity=27.1794871794872, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI297307160, Length=195, Percent_Identity=27.1794871794872, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI9257190, Length=196, Percent_Identity=27.0408163265306, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI297307158, Length=195, Percent_Identity=27.1794871794872, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI9257192, Length=195, Percent_Identity=27.1794871794872, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI9943848, Length=193, Percent_Identity=26.9430051813472, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI9951927, Length=193, Percent_Identity=26.9430051813472, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI62912453, Length=193, Percent_Identity=26.9430051813472, Blast_Score=71, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533216, Length=194, Percent_Identity=32.4742268041237, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI115533218, Length=195, Percent_Identity=32.3076923076923, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71989555, Length=222, Percent_Identity=31.5315315315315, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71989560, Length=222, Percent_Identity=31.5315315315315, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71989544, Length=222, Percent_Identity=31.5315315315315, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71989550, Length=222, Percent_Identity=31.5315315315315, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71989541, Length=222, Percent_Identity=31.5315315315315, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI281363755, Length=217, Percent_Identity=30.8755760368664, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281363751, Length=217, Percent_Identity=30.8755760368664, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24655690, Length=217, Percent_Identity=30.8755760368664, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24655685, Length=217, Percent_Identity=30.8755760368664, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI281363761, Length=217, Percent_Identity=30.8755760368664, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281363759, Length=217, Percent_Identity=30.8755760368664, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281363753, Length=217, Percent_Identity=30.8755760368664, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281363763, Length=214, Percent_Identity=31.3084112149533, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281363757, Length=214, Percent_Identity=31.3084112149533, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI17136738, Length=214, Percent_Identity=31.3084112149533, Blast_Score=80, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: 5.1.-.- [C]

Molecular weight: Translated: 28226; Mature: 28095

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHQLTSGAAPDGRRTGLDSDAVRTARIELAACFRLAAQHGFEEGICNHFSAVVPGHDDL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCE
FLVNPYGYAFSEITASRLLICDYDGNVIEGEGQPEATALSIHARLHRALPRVKAAFHTHM
EEECCCCCHHHHHHHCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PNATALCLLEGPPLLWLGQSALKFHGRTAVDEQYNGLALDAAEGDRIAAALGEADVLFLK
CCCEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEE
NHGVIVAGASIAEAWDDLYYLERAAEVQLKAMQTGRPLQTVPRHIAQRAHEQIRLGDPAS
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCH
ARAHLDSALRRLRAAGSDFEQ
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AHQLTSGAAPDGRRTGLDSDAVRTARIELAACFRLAAQHGFEEGICNHFSAVVPGHDDL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCE
FLVNPYGYAFSEITASRLLICDYDGNVIEGEGQPEATALSIHARLHRALPRVKAAFHTHM
EEECCCCCHHHHHHHCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PNATALCLLEGPPLLWLGQSALKFHGRTAVDEQYNGLALDAAEGDRIAAALGEADVLFLK
CCCEEEEEECCCCEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEECCCCEEEEEE
NHGVIVAGASIAEAWDDLYYLERAAEVQLKAMQTGRPLQTVPRHIAQRAHEQIRLGDPAS
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCH
ARAHLDSALRRLRAAGSDFEQ
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]