| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is cbbZ [H]
Identifier: 238024489
GI number: 238024489
Start: 1389700
End: 1390335
Strand: Reverse
Name: cbbZ [H]
Synonym: bglu_2g10880
Alternate gene names: 238024489
Gene position: 1390335-1389700 (Counterclockwise)
Preceding gene: 238024490
Following gene: 238024488
Centisome position: 49.17
GC content: 71.7
Gene sequence:
>636_bases ATGACCCTACGCCTCGCCCTGTTCGATTTCGACGGCACCCTCGCCGACTCCTACCCCGTGTTCGCCGACGCGCTGAACGG CCTCGCGGCCCGCCACGGCTTTCGCCAGACCGCCGGCGAGGACCGGCGCAGGCTGCGCGGCCTGAGCGCGAGCGAGGTGC TGCGCGAGCTGGCGCTGCCGATCTGGAAAGTGCCGGCCGTGCTGTCCGACGCGCGTCGCGTCATGAGCCAACGAATTCAC GAGGTACGGCCGTTCCCGGGCATCGTGGCCGCACTGCAGGCACTGATCGACCGGCGGATCGCGGTGGCCGTGGCCACCTC GAACTCGCGGGACAACGTGCGAGCCGTGCTCGGCGACGCGCTCGTCGAACGCTTCGCGGCCGTCGAATGCAGCGCGTCGC TGTTCGGCAAGTCGCACCGGCTGCGCACGATCCTGAAGACCACCGGCACCGACGCCGCGCACGCGATCTATGTCGGGGAC GAAATTCGCGACGCCGAGGCGGCCGACGGCGTCGGCCTGCGCTACGGCGCGGTCGGCTGGGGCTATACCGACCTCGACGC GCTGCTCGCCAGGCGGCCGCATCAGGTGTTTCGCGAGCCGGCGGACCTGCTCGCGCTGGGCGCGGGCGTGGCCTGA
Upstream 100 bases:
>100_bases GTTGGCGGCAGTGGTTCGCCGACGGCTGCGGCCGCCCCGCCCCACCGTGCTCGTGCTTCCACCCTTGCCTTCCCGGCAGC GCCCCGCGCCGCCTTCGCCG
Downstream 100 bases:
>100_bases GACGGCCCGGCCCGCACCGACGAGGGCACGATCACGCCCGCACGATTTGCGTCGCCGGGTTGGTAAGCTTATGCCTTTGC GTTTCCAGTTCCGCGGAGGA
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: PGP; PGPase [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALPIWKVPAVLSDARRVMSQRIH EVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDALVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGD EIRDAEAADGVGLRYGAVGWGYTDLDALLARRPHQVFREPADLLALGAGVA
Sequences:
>Translated_211_residues MTLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALPIWKVPAVLSDARRVMSQRIH EVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDALVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGD EIRDAEAADGVGLRYGAVGWGYTDLDALLARRPHQVFREPADLLALGAGVA >Mature_210_residues TLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALPIWKVPAVLSDARRVMSQRIHE VRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDALVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGDE IRDAEAADGVGLRYGAVGWGYTDLDALLARRPHQVFREPADLLALGAGVA
Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.18 [H]
Molecular weight: Translated: 22813; Mature: 22682
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALP CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC IWKVPAVLSDARRVMSQRIHEVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH LVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGDEIRDAEAADGVGLRYGAVGW HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCC GYTDLDALLARRPHQVFREPADLLALGAGVA CHHHHHHHHHCCCHHHHHCHHHHHHHCCCCC >Mature Secondary Structure TLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALP EEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC IWKVPAVLSDARRVMSQRIHEVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH LVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGDEIRDAEAADGVGLRYGAVGW HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCC GYTDLDALLARRPHQVFREPADLLALGAGVA CHHHHHHHHHCCCHHHHHCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8654968 [H]