Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

Click here to switch to the map view.

The map label for this gene is cbbZ [H]

Identifier: 238024489

GI number: 238024489

Start: 1389700

End: 1390335

Strand: Reverse

Name: cbbZ [H]

Synonym: bglu_2g10880

Alternate gene names: 238024489

Gene position: 1390335-1389700 (Counterclockwise)

Preceding gene: 238024490

Following gene: 238024488

Centisome position: 49.17

GC content: 71.7

Gene sequence:

>636_bases
ATGACCCTACGCCTCGCCCTGTTCGATTTCGACGGCACCCTCGCCGACTCCTACCCCGTGTTCGCCGACGCGCTGAACGG
CCTCGCGGCCCGCCACGGCTTTCGCCAGACCGCCGGCGAGGACCGGCGCAGGCTGCGCGGCCTGAGCGCGAGCGAGGTGC
TGCGCGAGCTGGCGCTGCCGATCTGGAAAGTGCCGGCCGTGCTGTCCGACGCGCGTCGCGTCATGAGCCAACGAATTCAC
GAGGTACGGCCGTTCCCGGGCATCGTGGCCGCACTGCAGGCACTGATCGACCGGCGGATCGCGGTGGCCGTGGCCACCTC
GAACTCGCGGGACAACGTGCGAGCCGTGCTCGGCGACGCGCTCGTCGAACGCTTCGCGGCCGTCGAATGCAGCGCGTCGC
TGTTCGGCAAGTCGCACCGGCTGCGCACGATCCTGAAGACCACCGGCACCGACGCCGCGCACGCGATCTATGTCGGGGAC
GAAATTCGCGACGCCGAGGCGGCCGACGGCGTCGGCCTGCGCTACGGCGCGGTCGGCTGGGGCTATACCGACCTCGACGC
GCTGCTCGCCAGGCGGCCGCATCAGGTGTTTCGCGAGCCGGCGGACCTGCTCGCGCTGGGCGCGGGCGTGGCCTGA

Upstream 100 bases:

>100_bases
GTTGGCGGCAGTGGTTCGCCGACGGCTGCGGCCGCCCCGCCCCACCGTGCTCGTGCTTCCACCCTTGCCTTCCCGGCAGC
GCCCCGCGCCGCCTTCGCCG

Downstream 100 bases:

>100_bases
GACGGCCCGGCCCGCACCGACGAGGGCACGATCACGCCCGCACGATTTGCGTCGCCGGGTTGGTAAGCTTATGCCTTTGC
GTTTCCAGTTCCGCGGAGGA

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: PGP; PGPase [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MTLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALPIWKVPAVLSDARRVMSQRIH
EVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDALVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGD
EIRDAEAADGVGLRYGAVGWGYTDLDALLARRPHQVFREPADLLALGAGVA

Sequences:

>Translated_211_residues
MTLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALPIWKVPAVLSDARRVMSQRIH
EVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDALVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGD
EIRDAEAADGVGLRYGAVGWGYTDLDALLARRPHQVFREPADLLALGAGVA
>Mature_210_residues
TLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALPIWKVPAVLSDARRVMSQRIHE
VRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDALVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGDE
IRDAEAADGVGLRYGAVGWGYTDLDALLARRPHQVFREPADLLALGAGVA

Specific function: Specifically catalyzes the dephosphorylation of 2- phosphoglycolate [H]

COG id: COG0546

COG function: function code R; Predicted phosphatases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR006402 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: =3.1.3.18 [H]

Molecular weight: Translated: 22813; Mature: 22682

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALP
CEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
IWKVPAVLSDARRVMSQRIHEVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
LVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGDEIRDAEAADGVGLRYGAVGW
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCC
GYTDLDALLARRPHQVFREPADLLALGAGVA
CHHHHHHHHHCCCHHHHHCHHHHHHHCCCCC
>Mature Secondary Structure 
TLRLALFDFDGTLADSYPVFADALNGLAARHGFRQTAGEDRRRLRGLSASEVLRELALP
EEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
IWKVPAVLSDARRVMSQRIHEVRPFPGIVAALQALIDRRIAVAVATSNSRDNVRAVLGDA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
LVERFAAVECSASLFGKSHRLRTILKTTGTDAAHAIYVGDEIRDAEAADGVGLRYGAVGW
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCEEECCCCC
GYTDLDALLARRPHQVFREPADLLALGAGVA
CHHHHHHHHHCCCHHHHHCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8654968 [H]