| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024368
Identifier: 238024368
GI number: 238024368
Start: 1179610
End: 1180041
Strand: Reverse
Name: 238024368
Synonym: bglu_2g09610
Alternate gene names: NA
Gene position: 1180041-1179610 (Counterclockwise)
Preceding gene: 238024369
Following gene: 238024367
Centisome position: 41.74
GC content: 69.91
Gene sequence:
>432_bases ATGAGCCTCGACCTCGCCCACTTCACGCCCTTGCCCGCGCTCGCCGGCGGCCTGCTGATCGGCCTCGCGGCGACGCTGCT GGTGCTCGGCAACGGCCGTATCGCCGGCATCAGCGGCATGCTCGGGGGTCTGCTCGACGCCGGCCGGGATCGTTCCTGGC GCGCCGCGTTCGTGATCGGACTGCTTGGCGCGCCCTGGTTGGCCAGGCTTTTCACGACACTGCCGGCGGTCTCGATCACG TCATCGCCTGCGGTGCTGGTGGCGGCCGGCCTGCTGGTCGGCATCGGCACCCGTTACGCGTCCGGCTGCACCAGCGGCCA TGGCGTGTGCGGCCTGTCACGCGGTTCGCTGCGCTCGCTGGCCGCCACGGCAAGCTTCATGGCCACGGGTTTTGCGACTG TCTACGTGATCCGCCATCTGATCGGGCTTTGA
Upstream 100 bases:
>100_bases AGGGAAAGTACATGTACTACCGCCTCGCGAGCGCCGAAGTCGTGAGCATCATGGAGACCTTGTCGAAACTGTATTGCGGT GACGCCAAGGGGCGGCCGGC
Downstream 100 bases:
>100_bases CATGCTGCTTCTCAACGCGCTGCTATGCGGCCTGCTGTTCGCGGCAGGACTGCTCGTCTCCGGCATGGCCAACCCGGCCA AGGTGCTGGGTTTCCTCGAT
Product: YeeE/YedE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSLDLAHFTPLPALAGGLLIGLAATLLVLGNGRIAGISGMLGGLLDAGRDRSWRAAFVIGLLGAPWLARLFTTLPAVSIT SSPAVLVAAGLLVGIGTRYASGCTSGHGVCGLSRGSLRSLAATASFMATGFATVYVIRHLIGL
Sequences:
>Translated_143_residues MSLDLAHFTPLPALAGGLLIGLAATLLVLGNGRIAGISGMLGGLLDAGRDRSWRAAFVIGLLGAPWLARLFTTLPAVSIT SSPAVLVAAGLLVGIGTRYASGCTSGHGVCGLSRGSLRSLAATASFMATGFATVYVIRHLIGL >Mature_142_residues SLDLAHFTPLPALAGGLLIGLAATLLVLGNGRIAGISGMLGGLLDAGRDRSWRAAFVIGLLGAPWLARLFTTLPAVSITS SPAVLVAAGLLVGIGTRYASGCTSGHGVCGLSRGSLRSLAATASFMATGFATVYVIRHLIGL
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 14358; Mature: 14227
Theoretical pI: Translated: 11.63; Mature: 11.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDLAHFTPLPALAGGLLIGLAATLLVLGNGRIAGISGMLGGLLDAGRDRSWRAAFVIG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHH LLGAPWLARLFTTLPAVSITSSPAVLVAAGLLVGIGTRYASGCTSGHGVCGLSRGSLRSL HHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHH AATASFMATGFATVYVIRHLIGL HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLDLAHFTPLPALAGGLLIGLAATLLVLGNGRIAGISGMLGGLLDAGRDRSWRAAFVIG CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHH LLGAPWLARLFTTLPAVSITSSPAVLVAAGLLVGIGTRYASGCTSGHGVCGLSRGSLRSL HHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCHHHHH AATASFMATGFATVYVIRHLIGL HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]