| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024367
Identifier: 238024367
GI number: 238024367
Start: 1179183
End: 1179608
Strand: Reverse
Name: 238024367
Synonym: bglu_2g09600
Alternate gene names: NA
Gene position: 1179608-1179183 (Counterclockwise)
Preceding gene: 238024368
Following gene: 238024360
Centisome position: 41.72
GC content: 69.95
Gene sequence:
>426_bases ATGCTGCTTCTCAACGCGCTGCTATGCGGCCTGCTGTTCGCGGCAGGACTGCTCGTCTCCGGCATGGCCAACCCGGCCAA GGTGCTGGGTTTCCTCGATATCGCGGGCAACTGGGACCCGTCGCTGGCCTTGGTCATGGCCGGCGCGATCGCGGCCGGCA GCGTCGGCTTCGCGATCGCGCGCCGGCTCAAGCGCAGCCTGCTCGGCGCACCGCTGTCGATGCCGACCGCCACGCGCATC GACCGCCGCCTGCTCGCGGGCAGCGCCATGTTCGGTGCCGGCTGGGGCCTGGCGGGGTTCTGCCCGGGCCCGGCTCTGGT GAGCGCGGGCGGCGGCGAGATCAAGGCGATCTGGTTCGTCGTCGCGATGCTGGCCGGCATGAAGATTTTCTCGTTGCGCG AACAACGCGCGACTCGTGCCGATTGA
Upstream 100 bases:
>100_bases CTGTCACGCGGTTCGCTGCGCTCGCTGGCCGCCACGGCAAGCTTCATGGCCACGGGTTTTGCGACTGTCTACGTGATCCG CCATCTGATCGGGCTTTGAC
Downstream 100 bases:
>100_bases CCGCAACCCTGCAGGCGCGTTCGTGCCGGCGGCCGTGCCCGGCCTGCCTCCCGGGATCGTTCGAGGTGGGAAACCGCCAT CGCGGCCAGGCTCGAATGCC
Product: YeeE/YedE family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLLLNALLCGLLFAAGLLVSGMANPAKVLGFLDIAGNWDPSLALVMAGAIAAGSVGFAIARRLKRSLLGAPLSMPTATRI DRRLLAGSAMFGAGWGLAGFCPGPALVSAGGGEIKAIWFVVAMLAGMKIFSLREQRATRAD
Sequences:
>Translated_141_residues MLLLNALLCGLLFAAGLLVSGMANPAKVLGFLDIAGNWDPSLALVMAGAIAAGSVGFAIARRLKRSLLGAPLSMPTATRI DRRLLAGSAMFGAGWGLAGFCPGPALVSAGGGEIKAIWFVVAMLAGMKIFSLREQRATRAD >Mature_141_residues MLLLNALLCGLLFAAGLLVSGMANPAKVLGFLDIAGNWDPSLALVMAGAIAAGSVGFAIARRLKRSLLGAPLSMPTATRI DRRLLAGSAMFGAGWGLAGFCPGPALVSAGGGEIKAIWFVVAMLAGMKIFSLREQRATRAD
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 14443; Mature: 14443
Theoretical pI: Translated: 11.45; Mature: 11.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLNALLCGLLFAAGLLVSGMANPAKVLGFLDIAGNWDPSLALVMAGAIAAGSVGFAIA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RRLKRSLLGAPLSMPTATRIDRRLLAGSAMFGAGWGLAGFCPGPALVSAGGGEIKAIWFV HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEECCCCCHHHHHHH VAMLAGMKIFSLREQRATRAD HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLLLNALLCGLLFAAGLLVSGMANPAKVLGFLDIAGNWDPSLALVMAGAIAAGSVGFAIA CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH RRLKRSLLGAPLSMPTATRIDRRLLAGSAMFGAGWGLAGFCPGPALVSAGGGEIKAIWFV HHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEECCCCCHHHHHHH VAMLAGMKIFSLREQRATRAD HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]