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The map label for this gene is nahR [H]

Identifier: 238024360

GI number: 238024360

Start: 1172939

End: 1173859

Strand: Reverse

Name: nahR [H]

Synonym: bglu_2g09530

Alternate gene names: 238024360

Gene position: 1173859-1172939 (Counterclockwise)

Preceding gene: 238024367

Following gene: 238024358

Centisome position: 41.52

GC content: 68.19

Gene sequence:

>921_bases
ATGACGCCGACCGACCTGCCCGAACTGAAGCTGCTGCAGCTGTTCGACCTGCTCTACGACGCGCGCAGCGTCACGCGCGC
GGCCGAGCAACTCGGCCAGAGCCAGCCGACCGTCAGCATCTGGCTGGCGCGTTTGCGCGAGCATCTGCACGACCCGCTGT
TCGTTCGCACCGCGGCCGGCATGGTGCCGACCCCGCAAGCGGACGCGCTGATCGGCCCGTGCCGGGAGATACTCGAATCA
TTGCGGCGCCTCTCGACCTGGGAGGTCGCGTTCGACCCGGCGACCGCGCAGCGGCGCTTTCGCATCTGCATGAGCGACGC
GAGCCACGTGACCTTGCTGCCGCGCTTGCTCGCGCACGTGCGGGCGCAGGCGCCCGGCGTAAGGCTGCAGGCCGCGCGCA
TCGACGGCAACACCGAGCGCGCGCTCGAATCGGGCGAGGCCGATCTCGCGATCGGCTACGTGCCCTGGCTCAGCGGCGGC
ATCTATCAGCAGCAGCTTTACGAGCAGGATTGGGTGTGTCTCGCGAACCGCCATCATCCGCGCCTTAAAAAACGCCTGAG
CGCCAACGCCTATCGCACCGAAGGACATGTGGCGATCACGGCGGGCACCGGCACCGCCCTGCTCGAACAGGCGCTGCTGC
GCGAGCGCATCGAACGGCAGGTCGTGCTCGAACTGCCCGGCTTTCTCGGGCTCGGCGCGATCGTTCGAAACACGGATCTG
ATCACGACGTTGCCGCGCCACATCGGCGAGACGCTGGCCCAGGCGAGCGATCTGGCGGTCCATGGGTGCCCGATTCCGGT
CGAGGGCTTCGCGGTGCGGCAGCACTGGCACGCGCGCTATCACCACGAGGCGGGTAATCAATGGCTGCGCGCTCTGGTTG
CCCGCTTGTTCGGCCACTCGAGCAACGCACCGGAAGGCTGA

Upstream 100 bases:

>100_bases
TCTCCTTAACGTGTGAGGTCACGATAAGCGGCGCTGCACGATGTCGCAATGCAATGGAGAAAATGGCATCATTGCATTAT
TCAATATTGCTGATGCCGCG

Downstream 100 bases:

>100_bases
GCCGGCCTGTATGCGCCTGCTCTCAGCTTGGTCACCGGCGTCGATGCGCCCGTTTCGTTGACGGTGTCGTTGACGAAAGG
ACGGCGCTGGCGTGATGGCA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTPTDLPELKLLQLFDLLYDARSVTRAAEQLGQSQPTVSIWLARLREHLHDPLFVRTAAGMVPTPQADALIGPCREILES
LRRLSTWEVAFDPATAQRRFRICMSDASHVTLLPRLLAHVRAQAPGVRLQAARIDGNTERALESGEADLAIGYVPWLSGG
IYQQQLYEQDWVCLANRHHPRLKKRLSANAYRTEGHVAITAGTGTALLEQALLRERIERQVVLELPGFLGLGAIVRNTDL
ITTLPRHIGETLAQASDLAVHGCPIPVEGFAVRQHWHARYHHEAGNQWLRALVARLFGHSSNAPEG

Sequences:

>Translated_306_residues
MTPTDLPELKLLQLFDLLYDARSVTRAAEQLGQSQPTVSIWLARLREHLHDPLFVRTAAGMVPTPQADALIGPCREILES
LRRLSTWEVAFDPATAQRRFRICMSDASHVTLLPRLLAHVRAQAPGVRLQAARIDGNTERALESGEADLAIGYVPWLSGG
IYQQQLYEQDWVCLANRHHPRLKKRLSANAYRTEGHVAITAGTGTALLEQALLRERIERQVVLELPGFLGLGAIVRNTDL
ITTLPRHIGETLAQASDLAVHGCPIPVEGFAVRQHWHARYHHEAGNQWLRALVARLFGHSSNAPEG
>Mature_305_residues
TPTDLPELKLLQLFDLLYDARSVTRAAEQLGQSQPTVSIWLARLREHLHDPLFVRTAAGMVPTPQADALIGPCREILESL
RRLSTWEVAFDPATAQRRFRICMSDASHVTLLPRLLAHVRAQAPGVRLQAARIDGNTERALESGEADLAIGYVPWLSGGI
YQQQLYEQDWVCLANRHHPRLKKRLSANAYRTEGHVAITAGTGTALLEQALLRERIERQVVLELPGFLGLGAIVRNTDLI
TTLPRHIGETLAQASDLAVHGCPIPVEGFAVRQHWHARYHHEAGNQWLRALVARLFGHSSNAPEG

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=286, Percent_Identity=26.9230769230769, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1790147, Length=302, Percent_Identity=23.1788079470199, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34034; Mature: 33903

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTDLPELKLLQLFDLLYDARSVTRAAEQLGQSQPTVSIWLARLREHLHDPLFVRTAAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHCC
MVPTPQADALIGPCREILESLRRLSTWEVAFDPATAQRRFRICMSDASHVTLLPRLLAHV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH
RAQAPGVRLQAARIDGNTERALESGEADLAIGYVPWLSGGIYQQQLYEQDWVCLANRHHP
HHCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHCCHHEECCCCCH
RLKKRLSANAYRTEGHVAITAGTGTALLEQALLRERIERQVVLELPGFLGLGAIVRNTDL
HHHHHHCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
ITTLPRHIGETLAQASDLAVHGCPIPVEGFAVRQHWHARYHHEAGNQWLRALVARLFGHS
HHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SNAPEG
CCCCCC
>Mature Secondary Structure 
TPTDLPELKLLQLFDLLYDARSVTRAAEQLGQSQPTVSIWLARLREHLHDPLFVRTAAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHCC
MVPTPQADALIGPCREILESLRRLSTWEVAFDPATAQRRFRICMSDASHVTLLPRLLAHV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHH
RAQAPGVRLQAARIDGNTERALESGEADLAIGYVPWLSGGIYQQQLYEQDWVCLANRHHP
HHCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEHHHHCCCHHHHHHHHCCHHEECCCCCH
RLKKRLSANAYRTEGHVAITAGTGTALLEQALLRERIERQVVLELPGFLGLGAIVRNTDL
HHHHHHCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH
ITTLPRHIGETLAQASDLAVHGCPIPVEGFAVRQHWHARYHHEAGNQWLRALVARLFGHS
HHHHHHHHHHHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SNAPEG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]