Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is ybjJ [C]

Identifier: 238024299

GI number: 238024299

Start: 1071919

End: 1073169

Strand: Reverse

Name: ybjJ [C]

Synonym: bglu_2g08850

Alternate gene names: 238024299

Gene position: 1073169-1071919 (Counterclockwise)

Preceding gene: 238024300

Following gene: 238024298

Centisome position: 37.96

GC content: 74.5

Gene sequence:

>1251_bases
ATGACCGATTCCGTTTCCCCCGAGGCCGGCCGCGCGCCGGCCACCCGCCTCGATGCCGGCCGCCCGTGGATGCTCTATCT
GATGTTCGGCCTGTACGGCGTACAGCAGGGCATGCTCGGCCCGGCCATGCCGTTCGTGCGCGCCGAACTCGGCCTCGACC
TGCGTGCCGTCGGCCTGCACTTCGCCGCCTATGCGCTTGGCCTGGTGGCGATCGGCCTGCCCTATCGCTGGCTCACGCGC
CGCCGCCTGCCCACCGGCCTCGGCCAGATCGCGATCCTCTCGATCGTGGTGTCGAGCGGCCTGTTCTCGCTCGCGCGCGC
GCTGCCCGTCACGCTGCTGGCGGCCGTCGCGATGGGCCTGTCGGGCGGCCTCGTGCTCGCCATCGGTCAGGCCAAGCTCG
GCGCGCGCTATCGCGAGCAGGCTGCCGCGCGGCTGGTGGAGGCACACGTGGTGGCCGGGCTGTGCGTGCTGGGCGGCGCG
CTGCTGATCGGCGCCGCGACCTCGGCCGGCGCATCGTGGCGCGTCGCGCCGGTGCTGGTGGCGCTGATCGCGGTGGCGCT
GGCCGCGTGGCCGGTGCCGGCCTATCGTCGCGACGAGGCCGCGCTGCACGCCGGCCCCGGCGCGCCCGGGCAACCGGCAG
CCGGTGCCGCGGCGCGGGCGCCGCGCGCACTGCTGGTGAGCCTGTGGGCGCTGGTGATCCTCGGCATCTCGGGTGAATGG
GGCGTCGGCTTCTGGGGTGCCGAGTTCCTGAAGGACACCGTGGCCGGCAACGCCTCGGCCGCCGCCACGCTGATGAGCGT
CTATTTCGGCGGCACCGTGGCCGGCCGCCTCGCCAGCAGCGCGCTGCTGCGCCGACTGCACCCGCTCACGCTGCTGGCCG
CGGTCGCGCTCGGCGCGATCGCGGTGTTCTGCGCGCTGCACGCCACCCGCGACCTGGCCGTCACCACCGCGCTCACCGCG
CTGCTCGGCGCCTGTCTCGGCAACTTCTTCCCGCTGATCCTCGGCGCGGCGATGCGCGCCGCGCCCGACGCCGGGCCGAC
CCTGAGCGCGCGCGCCTCGCAGGCGGTGGGCGTCGCGCTGCTGGTCGCGCCGTTCCTGCTCGGCATGCTGTCGGAGCACA
TCGGCATGCGCGCCGCGTTCTCGCTGTTGGTGGCGTGCCCGCTCCTGATGCTGCCGTTCCTGCCCGGGCTGCGCGAGCCA
AGACCGCGCACCGCCCATTACCAAGCCTCAGAAGGAGTCTCCCCGAAGTGA

Upstream 100 bases:

>100_bases
GATCTCGATGTCACGCCCGAACCGGCGCCGCTCGATCTGCCCGGGCCGCCGCCGCGTGTGCCGCACGCCGGCGCCCTCTC
CACGACCACCCTGCTCCGAC

Downstream 100 bases:

>100_bases
GCGACATCACGTTCCTGTTCGACCTCGACGGTACGCTCGTCGATACCGACGCCCTGCACCTGAACGCCTACAACACGCTG
CTCGCGCGCTGGCAGCGCGC

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MTDSVSPEAGRAPATRLDAGRPWMLYLMFGLYGVQQGMLGPAMPFVRAELGLDLRAVGLHFAAYALGLVAIGLPYRWLTR
RRLPTGLGQIAILSIVVSSGLFSLARALPVTLLAAVAMGLSGGLVLAIGQAKLGARYREQAAARLVEAHVVAGLCVLGGA
LLIGAATSAGASWRVAPVLVALIAVALAAWPVPAYRRDEAALHAGPGAPGQPAAGAAARAPRALLVSLWALVILGISGEW
GVGFWGAEFLKDTVAGNASAAATLMSVYFGGTVAGRLASSALLRRLHPLTLLAAVALGAIAVFCALHATRDLAVTTALTA
LLGACLGNFFPLILGAAMRAAPDAGPTLSARASQAVGVALLVAPFLLGMLSEHIGMRAAFSLLVACPLLMLPFLPGLREP
RPRTAHYQASEGVSPK

Sequences:

>Translated_416_residues
MTDSVSPEAGRAPATRLDAGRPWMLYLMFGLYGVQQGMLGPAMPFVRAELGLDLRAVGLHFAAYALGLVAIGLPYRWLTR
RRLPTGLGQIAILSIVVSSGLFSLARALPVTLLAAVAMGLSGGLVLAIGQAKLGARYREQAAARLVEAHVVAGLCVLGGA
LLIGAATSAGASWRVAPVLVALIAVALAAWPVPAYRRDEAALHAGPGAPGQPAAGAAARAPRALLVSLWALVILGISGEW
GVGFWGAEFLKDTVAGNASAAATLMSVYFGGTVAGRLASSALLRRLHPLTLLAAVALGAIAVFCALHATRDLAVTTALTA
LLGACLGNFFPLILGAAMRAAPDAGPTLSARASQAVGVALLVAPFLLGMLSEHIGMRAAFSLLVACPLLMLPFLPGLREP
RPRTAHYQASEGVSPK
>Mature_415_residues
TDSVSPEAGRAPATRLDAGRPWMLYLMFGLYGVQQGMLGPAMPFVRAELGLDLRAVGLHFAAYALGLVAIGLPYRWLTRR
RLPTGLGQIAILSIVVSSGLFSLARALPVTLLAAVAMGLSGGLVLAIGQAKLGARYREQAAARLVEAHVVAGLCVLGGAL
LIGAATSAGASWRVAPVLVALIAVALAAWPVPAYRRDEAALHAGPGAPGQPAAGAAARAPRALLVSLWALVILGISGEWG
VGFWGAEFLKDTVAGNASAAATLMSVYFGGTVAGRLASSALLRRLHPLTLLAAVALGAIAVFCALHATRDLAVTTALTAL
LGACLGNFFPLILGAAMRAAPDAGPTLSARASQAVGVALLVAPFLLGMLSEHIGMRAAFSLLVACPLLMLPFLPGLREPR
PRTAHYQASEGVSPK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42581; Mature: 42450

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSVSPEAGRAPATRLDAGRPWMLYLMFGLYGVQQGMLGPAMPFVRAELGLDLRAVGLH
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
FAAYALGLVAIGLPYRWLTRRRLPTGLGQIAILSIVVSSGLFSLARALPVTLLAAVAMGL
HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGGLVLAIGQAKLGARYREQAAARLVEAHVVAGLCVLGGALLIGAATSAGASWRVAPVLV
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ALIAVALAAWPVPAYRRDEAALHAGPGAPGQPAAGAAARAPRALLVSLWALVILGISGEW
HHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCC
GVGFWGAEFLKDTVAGNASAAATLMSVYFGGTVAGRLASSALLRRLHPLTLLAAVALGAI
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFCALHATRDLAVTTALTALLGACLGNFFPLILGAAMRAAPDAGPTLSARASQAVGVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LVAPFLLGMLSEHIGMRAAFSLLVACPLLMLPFLPGLREPRPRTAHYQASEGVSPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDSVSPEAGRAPATRLDAGRPWMLYLMFGLYGVQQGMLGPAMPFVRAELGLDLRAVGLH
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHH
FAAYALGLVAIGLPYRWLTRRRLPTGLGQIAILSIVVSSGLFSLARALPVTLLAAVAMGL
HHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SGGLVLAIGQAKLGARYREQAAARLVEAHVVAGLCVLGGALLIGAATSAGASWRVAPVLV
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ALIAVALAAWPVPAYRRDEAALHAGPGAPGQPAAGAAARAPRALLVSLWALVILGISGEW
HHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCC
GVGFWGAEFLKDTVAGNASAAATLMSVYFGGTVAGRLASSALLRRLHPLTLLAAVALGAI
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFCALHATRDLAVTTALTALLGACLGNFFPLILGAAMRAAPDAGPTLSARASQAVGVAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LVAPFLLGMLSEHIGMRAAFSLLVACPLLMLPFLPGLREPRPRTAHYQASEGVSPK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA