| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024204
Identifier: 238024204
GI number: 238024204
Start: 948210
End: 948995
Strand: Reverse
Name: 238024204
Synonym: bglu_2g07840
Alternate gene names: NA
Gene position: 948995-948210 (Counterclockwise)
Preceding gene: 238024205
Following gene: 238024203
Centisome position: 33.57
GC content: 67.43
Gene sequence:
>786_bases ATGACATTCCCGATCCGGATCATGCGCGCCGCCGCGCTGCTGCTCGCGCTCGCCGCCAGCGCGGCCGCGGCGAGCGGCCC GTCGGCGCAGCAGCTGCTCGCCCAAAGCGACGCGGTGCGCAACCCCGACAAGCCATTCGGCCTGACGACGACGCTGCTCG AATTTCGCAACGGACAGCAGACGGACGCCGAGGTGCTGAAGATCTACTCCAAGGCCGATCCGGCAAGCGGCCAGTTCCGC ACGCTGGTGCAGTTCGTCGCCCCGGCCCGCGACGCCAACAAGCTGATGCTGAAGAACGGCAACGATCTGTGGTTCTACGA TCCGTCGAGCCAGGCAAGCGTCCGGATCTCACCGCAGCAGCGCCTGCTCGGCCAGGCCGCCAACGGAGACGTGGTGACCG TCAACTGGGCGAACGACTACGACGCGTCGCTCGCAGGCGAGGAGAATGTGCTGGACGGCGAGCACCAGACCCGGTCCTGC TACCGGCTGCACCTGACGGCACGCTCGCCGGATGTCACCTACCATGCGATCGACCTGTGGATCGCCAGCGACACGAAGCG GCCGGTCAAGGCGCGCTTCTTCGCGGCCAGCGGCAGCGTGCTGAAAATCGCGTACTACCGGCACTACCAGGAGCAACTGG GCGCGGCGCGGCCGACGGAAACCGTCATCATCGACGGGCTCGATCCGGGCTGGGTCACGGTGATGCGCTATGCCGACTAC GCGTGGCGCGACATTCCGGATGCGTGGCTGCAGCGCGCGTACCTGTCCCGCTTCAAGGCCGACTAG
Upstream 100 bases:
>100_bases GACGGTGGTGGCGACGCTCTCGGCCTGGCTGCCCGCGCACCGTGCCGCCCGCCTGCCGATCGTCGAGGCCTTGCGCTTCG CCTGACCTGGAGCCTTCAAC
Downstream 100 bases:
>100_bases ACGATGGCACGATCCCGGCTCGCGGCGCTCGTCTGCGCGGCTGGCTTCGCAGCCGCGCAGGCCGCGCTGGCGGCCGACGA CGCCGACAGCGACGCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTFPIRIMRAAALLLALAASAAAASGPSAQQLLAQSDAVRNPDKPFGLTTTLLEFRNGQQTDAEVLKIYSKADPASGQFR TLVQFVAPARDANKLMLKNGNDLWFYDPSSQASVRISPQQRLLGQAANGDVVTVNWANDYDASLAGEENVLDGEHQTRSC YRLHLTARSPDVTYHAIDLWIASDTKRPVKARFFAASGSVLKIAYYRHYQEQLGAARPTETVIIDGLDPGWVTVMRYADY AWRDIPDAWLQRAYLSRFKAD
Sequences:
>Translated_261_residues MTFPIRIMRAAALLLALAASAAAASGPSAQQLLAQSDAVRNPDKPFGLTTTLLEFRNGQQTDAEVLKIYSKADPASGQFR TLVQFVAPARDANKLMLKNGNDLWFYDPSSQASVRISPQQRLLGQAANGDVVTVNWANDYDASLAGEENVLDGEHQTRSC YRLHLTARSPDVTYHAIDLWIASDTKRPVKARFFAASGSVLKIAYYRHYQEQLGAARPTETVIIDGLDPGWVTVMRYADY AWRDIPDAWLQRAYLSRFKAD >Mature_260_residues TFPIRIMRAAALLLALAASAAAASGPSAQQLLAQSDAVRNPDKPFGLTTTLLEFRNGQQTDAEVLKIYSKADPASGQFRT LVQFVAPARDANKLMLKNGNDLWFYDPSSQASVRISPQQRLLGQAANGDVVTVNWANDYDASLAGEENVLDGEHQTRSCY RLHLTARSPDVTYHAIDLWIASDTKRPVKARFFAASGSVLKIAYYRHYQEQLGAARPTETVIIDGLDPGWVTVMRYADYA WRDIPDAWLQRAYLSRFKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28940; Mature: 28809
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPIRIMRAAALLLALAASAAAASGPSAQQLLAQSDAVRNPDKPFGLTTTLLEFRNGQQ CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC TDAEVLKIYSKADPASGQFRTLVQFVAPARDANKLMLKNGNDLWFYDPSSQASVRISPQQ CHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCEEEECHHH RLLGQAANGDVVTVNWANDYDASLAGEENVLDGEHQTRSCYRLHLTARSPDVTYHAIDLW HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEE IASDTKRPVKARFFAASGSVLKIAYYRHYQEQLGAARPTETVIIDGLDPGWVTVMRYADY EECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH AWRDIPDAWLQRAYLSRFKAD HHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TFPIRIMRAAALLLALAASAAAASGPSAQQLLAQSDAVRNPDKPFGLTTTLLEFRNGQQ CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCC TDAEVLKIYSKADPASGQFRTLVQFVAPARDANKLMLKNGNDLWFYDPSSQASVRISPQQ CHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCEEEECHHH RLLGQAANGDVVTVNWANDYDASLAGEENVLDGEHQTRSCYRLHLTARSPDVTYHAIDLW HHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEE IASDTKRPVKARFFAASGSVLKIAYYRHYQEQLGAARPTETVIIDGLDPGWVTVMRYADY EECCCCCCCEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHH AWRDIPDAWLQRAYLSRFKAD HHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA