| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238024203
Identifier: 238024203
GI number: 238024203
Start: 946944
End: 948206
Strand: Reverse
Name: 238024203
Synonym: bglu_2g07830
Alternate gene names: NA
Gene position: 948206-946944 (Counterclockwise)
Preceding gene: 238024204
Following gene: 238024201
Centisome position: 33.54
GC content: 67.62
Gene sequence:
>1263_bases ATGGCACGATCCCGGCTCGCGGCGCTCGTCTGCGCGGCTGGCTTCGCAGCCGCGCAGGCCGCGCTGGCGGCCGACGACGC CGACAGCGACGCGCTGCGGCTCGCCGATGCGGCAACCGCACCGCCCATGACGCCAAGCAACTGGCACGGTACGTTCGAGG CCGCCGCCGCGAACTACACGGCAGCGAGCCAGGCCGGGCCGGTGACGCTCAACGACAACGCGCGCGTGTCGAACACGCTG TCGTACGACCGCACCTCCGGCAACTGGCGGGCGATCGTGTCGAATCGCGTCGATGCGGGATGGCGCGCGGGCACCTCGCA GTACAACGCCGTGGACACGCTGAAGCAGGCCTACGTGAGCTGGCAGGCGGGTCCGAGCGCGATCATCGATGTCGGCCGCG TGAACCTGCGCGAAGGCGTCGCGTCGGGCTTCAATCCCACGGACTTCTTCAAGGCCGGCGCGCTACGCTCGGTCGTGTCG ATCGACCCCGAGAGCCTGCGCGAGAACCGGCTCGGCAGCGTGATGGCGCGCGGGCAACTGCTGTGGAGCGGCGGCTCGAT GACTGCCCTGGTGGCGCCGCGGCTCGCGACGCGGCCCAGCCAGGCCAGCTTCAACCCCGATCTCGGTGCAACCAACGCGC GCACCCGCTACATGCTGAGTGGGTCGCAACGGCTGTTCGGCAGCTTCTCGCCGCAATGGCTGCTGTACGGCGGAGAAGGC ATCGCACCTCAATTGGGCGTCAACGCCACCACGCTATTCGGCGACGCGACGGTCGGATTCCTCGAATATGCGATCGGCCG CGGCAGCGCGGTCGAGGATTTCGCAGCGGCCGCGCCATCCTGGACCTCGAAGCTGGCAACCGGCGTCACCCATACCTTCG CGAACAAACTGTCACTGACGCTCGAGTACGACTACGACGGCGCCAGCGCGAGCGCTGCCGCATGGCGCGTGCTGCAGCGC GACCCGGCGCAATACTGGCGCTATCGTGACGCGGCGAGCCTGGCGCAGGAGCTGATGACGCGCCGCTCGTTGTTCGCCTA TGCATCGATGCCCGACGTGTTCGTCGAGCATCTGGACCTGACGGCGATGGCACGCTACAACCTCGACGACCACAGCTACT TCATGTGGCTCGAAGGGCGCTATCACTGGCCGCGTACCGATTTCGCCGTGCAATGGCAAAGCAGTCACGGCTCGCAGCAC AGCGTGTATGGCGCACAGGCGCAAGGCGAGATCGTGCAGGCGATCGCGACGTTCTTCTTTTGA
Upstream 100 bases:
>100_bases CTGGGTCACGGTGATGCGCTATGCCGACTACGCGTGGCGCGACATTCCGGATGCGTGGCTGCAGCGCGCGTACCTGTCCC GCTTCAAGGCCGACTAGACG
Downstream 100 bases:
>100_bases ACAGGGAAGCGGCGGGCAGCCAGCCGTCGGCGCGCGTCGTGCGGGACGCGCCCGGCACGCTGCTGCGGACCGGCAAGGCG ATGTGGTGTCCCGCGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MARSRLAALVCAAGFAAAQAALAADDADSDALRLADAATAPPMTPSNWHGTFEAAAANYTAASQAGPVTLNDNARVSNTL SYDRTSGNWRAIVSNRVDAGWRAGTSQYNAVDTLKQAYVSWQAGPSAIIDVGRVNLREGVASGFNPTDFFKAGALRSVVS IDPESLRENRLGSVMARGQLLWSGGSMTALVAPRLATRPSQASFNPDLGATNARTRYMLSGSQRLFGSFSPQWLLYGGEG IAPQLGVNATTLFGDATVGFLEYAIGRGSAVEDFAAAAPSWTSKLATGVTHTFANKLSLTLEYDYDGASASAAAWRVLQR DPAQYWRYRDAASLAQELMTRRSLFAYASMPDVFVEHLDLTAMARYNLDDHSYFMWLEGRYHWPRTDFAVQWQSSHGSQH SVYGAQAQGEIVQAIATFFF
Sequences:
>Translated_420_residues MARSRLAALVCAAGFAAAQAALAADDADSDALRLADAATAPPMTPSNWHGTFEAAAANYTAASQAGPVTLNDNARVSNTL SYDRTSGNWRAIVSNRVDAGWRAGTSQYNAVDTLKQAYVSWQAGPSAIIDVGRVNLREGVASGFNPTDFFKAGALRSVVS IDPESLRENRLGSVMARGQLLWSGGSMTALVAPRLATRPSQASFNPDLGATNARTRYMLSGSQRLFGSFSPQWLLYGGEG IAPQLGVNATTLFGDATVGFLEYAIGRGSAVEDFAAAAPSWTSKLATGVTHTFANKLSLTLEYDYDGASASAAAWRVLQR DPAQYWRYRDAASLAQELMTRRSLFAYASMPDVFVEHLDLTAMARYNLDDHSYFMWLEGRYHWPRTDFAVQWQSSHGSQH SVYGAQAQGEIVQAIATFFF >Mature_419_residues ARSRLAALVCAAGFAAAQAALAADDADSDALRLADAATAPPMTPSNWHGTFEAAAANYTAASQAGPVTLNDNARVSNTLS YDRTSGNWRAIVSNRVDAGWRAGTSQYNAVDTLKQAYVSWQAGPSAIIDVGRVNLREGVASGFNPTDFFKAGALRSVVSI DPESLRENRLGSVMARGQLLWSGGSMTALVAPRLATRPSQASFNPDLGATNARTRYMLSGSQRLFGSFSPQWLLYGGEGI APQLGVNATTLFGDATVGFLEYAIGRGSAVEDFAAAAPSWTSKLATGVTHTFANKLSLTLEYDYDGASASAAAWRVLQRD PAQYWRYRDAASLAQELMTRRSLFAYASMPDVFVEHLDLTAMARYNLDDHSYFMWLEGRYHWPRTDFAVQWQSSHGSQHS VYGAQAQGEIVQAIATFFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45311; Mature: 45179
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSRLAALVCAAGFAAAQAALAADDADSDALRLADAATAPPMTPSNWHGTFEAAAANYT CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHCCCCCCCCCCCCCCCCHHHHCCCC AASQAGPVTLNDNARVSNTLSYDRTSGNWRAIVSNRVDAGWRAGTSQYNAVDTLKQAYVS CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH WQAGPSAIIDVGRVNLREGVASGFNPTDFFKAGALRSVVSIDPESLRENRLGSVMARGQL CCCCCHHEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEE LWSGGSMTALVAPRLATRPSQASFNPDLGATNARTRYMLSGSQRLFGSFSPQWLLYGGEG EECCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCEEEECCCC IAPQLGVNATTLFGDATVGFLEYAIGRGSAVEDFAAAAPSWTSKLATGVTHTFANKLSLT CCCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCEEEEE LEYDYDGASASAAAWRVLQRDPAQYWRYRDAASLAQELMTRRSLFAYASMPDVFVEHLDL EEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCH TAMARYNLDDHSYFMWLEGRYHWPRTDFAVQWQSSHGSQHSVYGAQAQGEIVQAIATFFF HEEEECCCCCCCEEEEECCEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure ARSRLAALVCAAGFAAAQAALAADDADSDALRLADAATAPPMTPSNWHGTFEAAAANYT CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHCCCCCCCCCCCCCCCCHHHHCCCC AASQAGPVTLNDNARVSNTLSYDRTSGNWRAIVSNRVDAGWRAGTSQYNAVDTLKQAYVS CCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH WQAGPSAIIDVGRVNLREGVASGFNPTDFFKAGALRSVVSIDPESLRENRLGSVMARGQL CCCCCHHEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEE LWSGGSMTALVAPRLATRPSQASFNPDLGATNARTRYMLSGSQRLFGSFSPQWLLYGGEG EECCCCEEEEECCHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCEEEECCCC IAPQLGVNATTLFGDATVGFLEYAIGRGSAVEDFAAAAPSWTSKLATGVTHTFANKLSLT CCCCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCEEEEE LEYDYDGASASAAAWRVLQRDPAQYWRYRDAASLAQELMTRRSLFAYASMPDVFVEHLDL EEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCH TAMARYNLDDHSYFMWLEGRYHWPRTDFAVQWQSSHGSQHSVYGAQAQGEIVQAIATFFF HEEEECCCCCCCEEEEECCEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA