| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is macB [H]
Identifier: 238024205
GI number: 238024205
Start: 949011
End: 950408
Strand: Reverse
Name: macB [H]
Synonym: bglu_2g07850
Alternate gene names: 238024205
Gene position: 950408-949011 (Counterclockwise)
Preceding gene: 238024206
Following gene: 238024204
Centisome position: 33.62
GC content: 69.89
Gene sequence:
>1398_bases ATGAGCGTCTGGGTGCTCGCCTTCCGCAACCTGTTGCGCAACCGCCGCCGCTCGTCCACCACGCTGCTGGCGATGATCGT CGGCCTGACCGCGATCCTGCTGTTCGGCGGCTATGCGCGCAACATCAATTACGGCCTCCAGACCAGCTACGTGCGCCAGG GCGGCCATCTGCAGATCCAGCACCGCGACTATTTCCTGTACGGCAGCGGCGACCCTGTCTCCTACGGGATCGACGACTAC CGGAAGGTCATGGATACCGTGCGCGGCGATCCCGAGCTGGCGCGCGAGGTGACGGTGGTGACGCCGGTGCTGACCGTCAA CGGCATCGCCGGCAACTTCGCGGCGGGCGTCTCGCGCACCGTCTCGGGCAGCGGGATCGTGGTGGCCGACCAGAACCGGA TGCGCCAGTGGAACGACTATGGTTTCGCCGATCGCGCGACACCCCTCGCGCTGACCGGCAGCGCCGCGAATGCCGTGGTG ATCGGCACCGGCGTCGCGCGCGTGCTGCGCCTGTGCGACGCGCTGCGGGTACCCGCATGCCGCGATCCGGTGCCGGCCGC CCCGGCCGGCACGTCGGAACTGCCTGCCGACATCGCCTCGCTGTCGCAGGCCGAGGCCGCCGCGAAGCCCAAGCACGGCG GCGGGCCCGCCCGCCTCGAACTGCTGACCTCGAATGCGTACGGCGCGCCGAACGTCGCCGATCTGTCGGTGATCGCGGCG CAGAAGCAAGGCGTCAAGCAGATCGACGACATGTTCGTGCAGATGCGTCTTGCGCAGGCGCAGCAGCTCGTCTACGGCAG CGGCCCGAGTGCGAAGGTGACGTCCATCGTCGTGCAGCTGAAGCACACGGCCGATCTGCCGGCCGCGCGCGCGCGCATCC AGACGCTGCTGCGCACCCGGCTCGCGGGCGAGCCGCTCGAGGTGCTCGGCTTCGCGACGCTGAATCCGCAGTACGGGCAG GTCACCGGTATGTTCGGCGCGATCTTCGGCTTCATCGCCATCTTGATCGCCACGATCGTGCTGTTCACGGTCGGCAACAC GATGAACATGGCCGTGATGGAGCGCACCCACGAGATCGGCACGCTGCGCGCACTCGGTCTGCGCGACGCCGGCATTCGCC GGCTGTTCGTCTGCGAAGGGTGCCTGCTCGGCATCTGCGGCGCCGCCGCGGGCACCGTGCTCGCACTCGCGGCGGGAGTC GCGATCAACCGCGCCGGCCTGCACTGGACGCCGCCCGGGCAGACCGATCCGGTCGCCCTGTCGGTACGCGTATGGGGCGA GTTCGGGATGATCGCGCGCTACGCACTCGGCGTGACGGTGGTGGCGACGCTCTCGGCCTGGCTGCCCGCGCACCGTGCCG CCCGCCTGCCGATCGTCGAGGCCTTGCGCTTCGCCTGA
Upstream 100 bases:
>100_bases ACGACCCGCAGGTGATCGCGGCCGCGGACGATGTCGCGACGATCAGCGACGGGCGCGTCGTCGCGACCCGCCCGACCGCG CTGCACGAGGAGGCCTGCCA
Downstream 100 bases:
>100_bases CCTGGAGCCTTCAACATGACATTCCCGATCCGGATCATGCGCGCCGCCGCGCTGCTGCTCGCGCTCGCCGCCAGCGCGGC CGCGGCGAGCGGCCCGTCGG
Product: efflux ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MSVWVLAFRNLLRNRRRSSTTLLAMIVGLTAILLFGGYARNINYGLQTSYVRQGGHLQIQHRDYFLYGSGDPVSYGIDDY RKVMDTVRGDPELAREVTVVTPVLTVNGIAGNFAAGVSRTVSGSGIVVADQNRMRQWNDYGFADRATPLALTGSAANAVV IGTGVARVLRLCDALRVPACRDPVPAAPAGTSELPADIASLSQAEAAAKPKHGGGPARLELLTSNAYGAPNVADLSVIAA QKQGVKQIDDMFVQMRLAQAQQLVYGSGPSAKVTSIVVQLKHTADLPAARARIQTLLRTRLAGEPLEVLGFATLNPQYGQ VTGMFGAIFGFIAILIATIVLFTVGNTMNMAVMERTHEIGTLRALGLRDAGIRRLFVCEGCLLGICGAAAGTVLALAAGV AINRAGLHWTPPGQTDPVALSVRVWGEFGMIARYALGVTVVATLSAWLPAHRAARLPIVEALRFA
Sequences:
>Translated_465_residues MSVWVLAFRNLLRNRRRSSTTLLAMIVGLTAILLFGGYARNINYGLQTSYVRQGGHLQIQHRDYFLYGSGDPVSYGIDDY RKVMDTVRGDPELAREVTVVTPVLTVNGIAGNFAAGVSRTVSGSGIVVADQNRMRQWNDYGFADRATPLALTGSAANAVV IGTGVARVLRLCDALRVPACRDPVPAAPAGTSELPADIASLSQAEAAAKPKHGGGPARLELLTSNAYGAPNVADLSVIAA QKQGVKQIDDMFVQMRLAQAQQLVYGSGPSAKVTSIVVQLKHTADLPAARARIQTLLRTRLAGEPLEVLGFATLNPQYGQ VTGMFGAIFGFIAILIATIVLFTVGNTMNMAVMERTHEIGTLRALGLRDAGIRRLFVCEGCLLGICGAAAGTVLALAAGV AINRAGLHWTPPGQTDPVALSVRVWGEFGMIARYALGVTVVATLSAWLPAHRAARLPIVEALRFA >Mature_464_residues SVWVLAFRNLLRNRRRSSTTLLAMIVGLTAILLFGGYARNINYGLQTSYVRQGGHLQIQHRDYFLYGSGDPVSYGIDDYR KVMDTVRGDPELAREVTVVTPVLTVNGIAGNFAAGVSRTVSGSGIVVADQNRMRQWNDYGFADRATPLALTGSAANAVVI GTGVARVLRLCDALRVPACRDPVPAAPAGTSELPADIASLSQAEAAAKPKHGGGPARLELLTSNAYGAPNVADLSVIAAQ KQGVKQIDDMFVQMRLAQAQQLVYGSGPSAKVTSIVVQLKHTADLPAARARIQTLLRTRLAGEPLEVLGFATLNPQYGQV TGMFGAIFGFIAILIATIVLFTVGNTMNMAVMERTHEIGTLRALGLRDAGIRRLFVCEGCLLGICGAAAGTVLALAAGVA INRAGLHWTPPGQTDPVALSVRVWGEFGMIARYALGVTVVATLSAWLPAHRAARLPIVEALRFA
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG4591
COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 49309; Mature: 49178
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVWVLAFRNLLRNRRRSSTTLLAMIVGLTAILLFGGYARNINYGLQTSYVRQGGHLQIQ CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHCCCCCEEEE HRDYFLYGSGDPVSYGIDDYRKVMDTVRGDPELAREVTVVTPVLTVNGIAGNFAAGVSRT ECEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHEEEEEEEEEEECCCCCCHHHCCHHE VSGSGIVVADQNRMRQWNDYGFADRATPLALTGSAANAVVIGTGVARVLRLCDALRVPAC ECCCEEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCC RDPVPAAPAGTSELPADIASLSQAEAAAKPKHGGGPARLELLTSNAYGAPNVADLSVIAA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH QKQGVKQIDDMFVQMRLAQAQQLVYGSGPSAKVTSIVVQLKHTADLPAARARIQTLLRTR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEHHHCCCCHHHHHHHHHHHHHH LAGEPLEVLGFATLNPQYGQVTGMFGAIFGFIAILIATIVLFTVGNTMNMAVMERTHEIG HCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLRALGLRDAGIRRLFVCEGCLLGICGAAAGTVLALAAGVAINRAGLHWTPPGQTDPVAL HEHEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCCCCEEE SVRVWGEFGMIARYALGVTVVATLSAWLPAHRAARLPIVEALRFA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure SVWVLAFRNLLRNRRRSSTTLLAMIVGLTAILLFGGYARNINYGLQTSYVRQGGHLQIQ CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHCCCCCEEEE HRDYFLYGSGDPVSYGIDDYRKVMDTVRGDPELAREVTVVTPVLTVNGIAGNFAAGVSRT ECEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHEEEEEEEEEEECCCCCCHHHCCHHE VSGSGIVVADQNRMRQWNDYGFADRATPLALTGSAANAVVIGTGVARVLRLCDALRVPAC ECCCEEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHCCCCC RDPVPAAPAGTSELPADIASLSQAEAAAKPKHGGGPARLELLTSNAYGAPNVADLSVIAA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH QKQGVKQIDDMFVQMRLAQAQQLVYGSGPSAKVTSIVVQLKHTADLPAARARIQTLLRTR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEHHHCCCCHHHHHHHHHHHHHH LAGEPLEVLGFATLNPQYGQVTGMFGAIFGFIAILIATIVLFTVGNTMNMAVMERTHEIG HCCCCHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH TLRALGLRDAGIRRLFVCEGCLLGICGAAAGTVLALAAGVAINRAGLHWTPPGQTDPVAL HEHEECCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCCCCEEE SVRVWGEFGMIARYALGVTVVATLSAWLPAHRAARLPIVEALRFA EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]