| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is yehU [H]
Identifier: 238024201
GI number: 238024201
Start: 944917
End: 945990
Strand: Reverse
Name: yehU [H]
Synonym: bglu_2g07810
Alternate gene names: 238024201
Gene position: 945990-944917 (Counterclockwise)
Preceding gene: 238024203
Following gene: 238024200
Centisome position: 33.46
GC content: 67.78
Gene sequence:
>1074_bases ATGCCAAGCAAGCTGCTCGCCTTCCTGTCGTCGGAACCGCAAATCGGCCCCGTGCCTCGGGGCCGCTCGCTGCTGGGGCT GTTCTGTTTCAATTCGGCGATCGGACTGATCTTCTGGGCGACGCGGCAACACGAGGCACTGTTACCGTACCTGATCGTCG CGAACGGCATCGGTTTCAGTGCGACGCTGCTCAGCGCAGGAATCGACAGGCTCGTGCGCGGCAAACTCGCCTTGGTGCCG AAGATTCTGATCGTCGCGCCCGCCAGCGTGTTCATCGGTTTCGAGGTCGCGGCCTCCACCACCGGGCACGTTCCGCACCT GATCGGGCATGCCGGCGTCAAGGTCTGGCTGGCCTACGGCTCGTCGTTCGTGGTCGCCGGCGCCGCCTGCGCGTTCGTCT CGGTGTTCGTACAGGCCGCACGCATGCGCACGTCGCTCGAAACGCAGCGGCGCGAGGCCGCCGAGGCGCGCCAGGCCGAA ACCGCCGCCCGGCTCGCCCTGCTGCAGGCCCAGATCGAGCCACATTTCCTGTTCAATACGCTGGCGAACGTGCAGAGCCT GATCGAGCGCGACCCCGCCCGCGCCACGACGATGCTCGACAGCCTGAACCGCTATCTGCGCGCAAGCCTCGGCCGCACGC GCAGGGCCATCGCCACGCTGGGCGAAGAACTGGAACTGGTCGAGGCGCTGCTGAAGATCGCGACGATCCGGCTGGGCCAG GAACGCCTGCGGTATGCGATCGCCGTGCCGGATGCACTGCGGGCCCTGCCCCTGTCGCCCCTGCTGCTGCAGCCTCTCGT CGAGAACGCCTTGCTGCACGGCATCGAGCCTTCCGTCGACGGTGGCGAGGTGAACATCCGCGGAACGCGCGACGGTGACC TGCTGGTGCTGAGCGTGAGCGACACCGGCGTGGGGCTCGGCAATGGCGGCACCAAGCTGCACGGCGGCGTGGGGCTCGCG AACGTTCGCGCGCGGATGATCAGCCTCTACGGCGAGCGCGGCCGCGTATCGGTTGGCACGAATGCCGACGCCAGACGCGG CGTGACCGCAACCTTGCAGATCCCGATTACCTGA
Upstream 100 bases:
>100_bases CGTCCGCGGTCGCCGGCGCAGGCCTGTCACGGTCGACCGCCGATAGCAACGCCGTCGCGAATTGAGCTACCATCTGCGCA ACCCGCCCCCGCTCGCTGCC
Downstream 100 bases:
>100_bases TATGCCGACAGCACTGATCGCCGACGACGAACCGAACCTGTCCGCCGAGCTCGCCGCGCGCCTCGGCACGCTGTGGCCCG AGCTGGAGATCGTCGGGATG
Product: Periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MPSKLLAFLSSEPQIGPVPRGRSLLGLFCFNSAIGLIFWATRQHEALLPYLIVANGIGFSATLLSAGIDRLVRGKLALVP KILIVAPASVFIGFEVAASTTGHVPHLIGHAGVKVWLAYGSSFVVAGAACAFVSVFVQAARMRTSLETQRREAAEARQAE TAARLALLQAQIEPHFLFNTLANVQSLIERDPARATTMLDSLNRYLRASLGRTRRAIATLGEELELVEALLKIATIRLGQ ERLRYAIAVPDALRALPLSPLLLQPLVENALLHGIEPSVDGGEVNIRGTRDGDLLVLSVSDTGVGLGNGGTKLHGGVGLA NVRARMISLYGERGRVSVGTNADARRGVTATLQIPIT
Sequences:
>Translated_357_residues MPSKLLAFLSSEPQIGPVPRGRSLLGLFCFNSAIGLIFWATRQHEALLPYLIVANGIGFSATLLSAGIDRLVRGKLALVP KILIVAPASVFIGFEVAASTTGHVPHLIGHAGVKVWLAYGSSFVVAGAACAFVSVFVQAARMRTSLETQRREAAEARQAE TAARLALLQAQIEPHFLFNTLANVQSLIERDPARATTMLDSLNRYLRASLGRTRRAIATLGEELELVEALLKIATIRLGQ ERLRYAIAVPDALRALPLSPLLLQPLVENALLHGIEPSVDGGEVNIRGTRDGDLLVLSVSDTGVGLGNGGTKLHGGVGLA NVRARMISLYGERGRVSVGTNADARRGVTATLQIPIT >Mature_356_residues PSKLLAFLSSEPQIGPVPRGRSLLGLFCFNSAIGLIFWATRQHEALLPYLIVANGIGFSATLLSAGIDRLVRGKLALVPK ILIVAPASVFIGFEVAASTTGHVPHLIGHAGVKVWLAYGSSFVVAGAACAFVSVFVQAARMRTSLETQRREAAEARQAET AARLALLQAQIEPHFLFNTLANVQSLIERDPARATTMLDSLNRYLRASLGRTRRAIATLGEELELVEALLKIATIRLGQE RLRYAIAVPDALRALPLSPLLLQPLVENALLHGIEPSVDGGEVNIRGTRDGDLLVLSVSDTGVGLGNGGTKLHGGVGLAN VRARMISLYGERGRVSVGTNADARRGVTATLQIPIT
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788446, Length=195, Percent_Identity=35.3846153846154, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788723, Length=198, Percent_Identity=32.8282828282828, Blast_Score=95, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR010559 - InterPro: IPR011620 [H]
Pfam domain/function: PF07694 5TM-5TMR_LYT; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: NA
Molecular weight: Translated: 37979; Mature: 37848
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKLLAFLSSEPQIGPVPRGRSLLGLFCFNSAIGLIFWATRQHEALLPYLIVANGIGFS CCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHCCCEEECCCCHH ATLLSAGIDRLVRGKLALVPKILIVAPASVFIGFEVAASTTGHVPHLIGHAGVKVWLAYG HHHHHHHHHHHHHCHHHHHHHHEEEECCHHEEEEEEECCCCCCCHHHHHHHHHEEEEEEC SSFVVAGAACAFVSVFVQAARMRTSLETQRREAAEARQAETAARLALLQAQIEPHFLFNT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LANVQSLIERDPARATTMLDSLNRYLRASLGRTRRAIATLGEELELVEALLKIATIRLGQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH ERLRYAIAVPDALRALPLSPLLLQPLVENALLHGIEPSVDGGEVNIRGTRDGDLLVLSVS HHHHEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEC DTGVGLGNGGTKLHGGVGLANVRARMISLYGERGRVSVGTNADARRGVTATLQIPIT CCCCEECCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECC >Mature Secondary Structure PSKLLAFLSSEPQIGPVPRGRSLLGLFCFNSAIGLIFWATRQHEALLPYLIVANGIGFS CHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCHHCCCEEECCCCHH ATLLSAGIDRLVRGKLALVPKILIVAPASVFIGFEVAASTTGHVPHLIGHAGVKVWLAYG HHHHHHHHHHHHHCHHHHHHHHEEEECCHHEEEEEEECCCCCCCHHHHHHHHHEEEEEEC SSFVVAGAACAFVSVFVQAARMRTSLETQRREAAEARQAETAARLALLQAQIEPHFLFNT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LANVQSLIERDPARATTMLDSLNRYLRASLGRTRRAIATLGEELELVEALLKIATIRLGQ HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH ERLRYAIAVPDALRALPLSPLLLQPLVENALLHGIEPSVDGGEVNIRGTRDGDLLVLSVS HHHHEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEC DTGVGLGNGGTKLHGGVGLANVRARMISLYGERGRVSVGTNADARRGVTATLQIPIT CCCCEECCCCCEEECCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]