| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024188
Identifier: 238024188
GI number: 238024188
Start: 931057
End: 931722
Strand: Direct
Name: 238024188
Synonym: bglu_2g07670
Alternate gene names: NA
Gene position: 931057-931722 (Clockwise)
Preceding gene: 238024187
Following gene: 238024189
Centisome position: 32.93
GC content: 75.08
Gene sequence:
>666_bases ATGACGAATCCGAACCCTTCCGACGCCACGCCGAATCCCGCCTTGCCCAACGGCGCCGTGCGCCTGCACGCGCCGGCCGC CGAGCGCAATCGCGAGCCGATCCTCGCGGTACTGCGCGAGGTCCTGCCCGAGGCGGGCACCGTGCTCGAGGTCGCGAGCG GCACCGGCCAGCACGCCGCGTACTTCGCCGCCGCGCTGCCGCGGCTGGTCTGGCAGCCGACCGATCCGGACTCGAAGGCG CTCGCGTCGATCGCCGCGCGCGTCGCCGACGCGGCGCTGCCGAACCTGCGCGCGCCGCTGCCGCTCGACGTGCGCGCCGA GCGCTGGCCGCTCGACGGCACTCGCGGCCTCGACGCCGTGGTCTGCATCAACATGATCCACATCTCGCCGTGGGAGGCGT GCCGGGCGCTGATCGACGGCGCCGCGCGCCGGCTCGACGACGGCGGCGTGCTGGTGCTGTACGGCCCGTACCGGCGCAAC GGCGCGCACACGGCGCCGTCCAACGAGGCGTTCGACGCGCAATTGCGCCAGCGCGACGCGGCCTGGGGCGTGCGCGATCT GGAGGCCGTGGACGCGCTGGCGCAGGCCGCCGGATTCGAGGCGGCGCAGGTCACCGAGATGCCGGCCAACAACCTCTGCG TGGTGTTCCGGCGGCGCGCGCGCTGA
Upstream 100 bases:
>100_bases GCGGCGCGAGGCGAAACCGCGCCGGCCGCATCGCGCATCGGCGGCCGATGCGGCACACTGCGCCCATCCGCCCTGTCGGG CTCACGCCGATTTTCTCTCC
Downstream 100 bases:
>100_bases GCGCGCCGCAGCGTCGCCATGCGGTTTTCCCGTATCCTTGCGGCTTGTGCGCGCGGCTCGGTCGGGCCGCGCCGTGATTT GATCGGAGAGTGAACAATGG
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MTNPNPSDATPNPALPNGAVRLHAPAAERNREPILAVLREVLPEAGTVLEVASGTGQHAAYFAAALPRLVWQPTDPDSKA LASIAARVADAALPNLRAPLPLDVRAERWPLDGTRGLDAVVCINMIHISPWEACRALIDGAARRLDDGGVLVLYGPYRRN GAHTAPSNEAFDAQLRQRDAAWGVRDLEAVDALAQAAGFEAAQVTEMPANNLCVVFRRRAR
Sequences:
>Translated_221_residues MTNPNPSDATPNPALPNGAVRLHAPAAERNREPILAVLREVLPEAGTVLEVASGTGQHAAYFAAALPRLVWQPTDPDSKA LASIAARVADAALPNLRAPLPLDVRAERWPLDGTRGLDAVVCINMIHISPWEACRALIDGAARRLDDGGVLVLYGPYRRN GAHTAPSNEAFDAQLRQRDAAWGVRDLEAVDALAQAAGFEAAQVTEMPANNLCVVFRRRAR >Mature_220_residues TNPNPSDATPNPALPNGAVRLHAPAAERNREPILAVLREVLPEAGTVLEVASGTGQHAAYFAAALPRLVWQPTDPDSKAL ASIAARVADAALPNLRAPLPLDVRAERWPLDGTRGLDAVVCINMIHISPWEACRALIDGAARRLDDGGVLVLYGPYRRNG AHTAPSNEAFDAQLRQRDAAWGVRDLEAVDALAQAAGFEAAQVTEMPANNLCVVFRRRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=202, Percent_Identity=45.5445544554455, Blast_Score=163, Evalue=1e-40, Organism=Homo sapiens, GI93102391, Length=148, Percent_Identity=45.2702702702703, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI93102401, Length=133, Percent_Identity=48.1203007518797, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI93102393, Length=63, Percent_Identity=58.7301587301587, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI93102395, Length=63, Percent_Identity=58.7301587301587, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71998087, Length=203, Percent_Identity=37.9310344827586, Blast_Score=140, Evalue=4e-34, Organism=Drosophila melanogaster, GI28574095, Length=202, Percent_Identity=38.1188118811881, Blast_Score=136, Evalue=1e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23654; Mature: 23523
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPNPSDATPNPALPNGAVRLHAPAAERNREPILAVLREVLPEAGTVLEVASGTGQHAA CCCCCCCCCCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHH YFAAALPRLVWQPTDPDSKALASIAARVADAALPNLRAPLPLDVRAERWPLDGTRGLDAV HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH VCINMIHISPWEACRALIDGAARRLDDGGVLVLYGPYRRNGAHTAPSNEAFDAQLRQRDA HHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH AWGVRDLEAVDALAQAAGFEAAQVTEMPANNLCVVFRRRAR HCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCC >Mature Secondary Structure TNPNPSDATPNPALPNGAVRLHAPAAERNREPILAVLREVLPEAGTVLEVASGTGQHAA CCCCCCCCCCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHH YFAAALPRLVWQPTDPDSKALASIAARVADAALPNLRAPLPLDVRAERWPLDGTRGLDAV HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH VCINMIHISPWEACRALIDGAARRLDDGGVLVLYGPYRRNGAHTAPSNEAFDAQLRQRDA HHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHH AWGVRDLEAVDALAQAAGFEAAQVTEMPANNLCVVFRRRAR HCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA