| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024178
Identifier: 238024178
GI number: 238024178
Start: 918028
End: 918549
Strand: Reverse
Name: 238024178
Synonym: bglu_2g07570
Alternate gene names: NA
Gene position: 918549-918028 (Counterclockwise)
Preceding gene: 238024179
Following gene: 238024176
Centisome position: 32.49
GC content: 66.48
Gene sequence:
>522_bases ATGACTATTCGAAAAGTGGCTTCCCTTGTCGTCGCTCTGGCAGTCTCGTCGGCGCTCGCCGCGCCGGCATTCGCCGTGAC GGTGTCGCTGGCCAACGGCAATCCGCTGAATCCGAACGGTGAGCCGTTCTCGGCCTCGGGCGCCACCACGCTGAAGAAGG GCACGGTCAGCACGAGCTGCACCGCGACCTTCAACGGCACGATCACGTCGACCGGCGCCGTCACCATCACCTCGGCGACG TTCGGCGGCGGCGGTCTCTGCGGTCTGATCTCCGGCAGCGCCACCAGCTCGGCGCCGTGGACGGGCCAGGCGGTCTCGAC CACGCAGCTCGCGATCAGCAACGTGCAGGTCAACGCCTCGCTGCTCGGCACCTGCGGCCCGAGCCCGATCAACGCGACCT TCAACAACAACCAGTCGGGCACGACGCCGCCGTCGTCGCTGACGTTCAACAACGCGACGCTGTCGCCGAACTGCTCGGTG AACGGCATCATCACCACCTCGCCGGCATTCAACGTGCAGTAA
Upstream 100 bases:
>100_bases CGCGGATGCATCCGGTTTTCCGTGGAACGCGGGCGGCAAGCCGCCTGCAGTCCGCTTACCCATGGCGGTTCGCCGCCAAT CGTCAATTGAGGCACGCATC
Downstream 100 bases:
>100_bases GCGGCCGGGCGGCTTGCGCGAGGCGCCGTGGCGTAGGGCCACGTTGCGGCGCGGTACGCGGTTATCGACGGGATGGTGCG CGCGCGCCGTCCCGTTTTTC
Product: PPE-repeat-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTIRKVASLVVALAVSSALAAPAFAVTVSLANGNPLNPNGEPFSASGATTLKKGTVSTSCTATFNGTITSTGAVTITSAT FGGGGLCGLISGSATSSAPWTGQAVSTTQLAISNVQVNASLLGTCGPSPINATFNNNQSGTTPPSSLTFNNATLSPNCSV NGIITTSPAFNVQ
Sequences:
>Translated_173_residues MTIRKVASLVVALAVSSALAAPAFAVTVSLANGNPLNPNGEPFSASGATTLKKGTVSTSCTATFNGTITSTGAVTITSAT FGGGGLCGLISGSATSSAPWTGQAVSTTQLAISNVQVNASLLGTCGPSPINATFNNNQSGTTPPSSLTFNNATLSPNCSV NGIITTSPAFNVQ >Mature_172_residues TIRKVASLVVALAVSSALAAPAFAVTVSLANGNPLNPNGEPFSASGATTLKKGTVSTSCTATFNGTITSTGAVTITSATF GGGGLCGLISGSATSSAPWTGQAVSTTQLAISNVQVNASLLGTCGPSPINATFNNNQSGTTPPSSLTFNNATLSPNCSVN GIITTSPAFNVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16900; Mature: 16769
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRKVASLVVALAVSSALAAPAFAVTVSLANGNPLNPNGEPFSASGATTLKKGTVSTSC CCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEE TATFNGTITSTGAVTITSATFGGGGLCGLISGSATSSAPWTGQAVSTTQLAISNVQVNAS EEEECCEEECCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEE LLGTCGPSPINATFNNNQSGTTPPSSLTFNNATLSPNCSVNGIITTSPAFNVQ EEECCCCCCEEEEECCCCCCCCCCCCEEECCCEECCCCCCCEEEECCCCCCCC >Mature Secondary Structure TIRKVASLVVALAVSSALAAPAFAVTVSLANGNPLNPNGEPFSASGATTLKKGTVSTSC CHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCEE TATFNGTITSTGAVTITSATFGGGGLCGLISGSATSSAPWTGQAVSTTQLAISNVQVNAS EEEECCEEECCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEEE LLGTCGPSPINATFNNNQSGTTPPSSLTFNNATLSPNCSVNGIITTSPAFNVQ EEECCCCCCEEEEECCCCCCCCCCCCEEECCCEECCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA