| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is pcp [H]
Identifier: 238024176
GI number: 238024176
Start: 912543
End: 914420
Strand: Reverse
Name: pcp [H]
Synonym: bglu_2g07550
Alternate gene names: 238024176
Gene position: 914420-912543 (Counterclockwise)
Preceding gene: 238024178
Following gene: 238024175
Centisome position: 32.34
GC content: 69.28
Gene sequence:
>1878_bases ATGAACCGAGTTTCCGGCAAGACCCGTCAGCGCTTCACGAAGCTCCTGATCGCCTCCGCGGCGCTGGCCGCGTTCGGCGC ATCGGCCGCGCAGGCAGCCACGCAGCAGAGCTGGACCACCACCCGCACCAAGGCCTTCCTGCCGCTGGTGCAAACCGCGA GCGCGGCGGCGGCCTCGCTCACGCAGGCAGCCGGCGCCACGCGGGCCACGCAGCCGATCCCGCTCGCCAACGGCGCGGCC GTCCATGTGACGGTGGGCCTGAAGCTGCGCAACGAAGCGCAGCTCGACCAGTTCCTCGCCAAGCTGCAGCAGGGCAGCGC CGGCACGCTCACGCCGCAGCAGTTCGCCGAACGGTACGGCCCGACGCAGCAGCAGGCCGACGCGGTCGCGCAGTATCTGC GCGCCTCGGGCTTCACCAACGTGCAGATCGCGCCGAATCGCCTGTTCGTGACGGCCGACGGCACGGCCGGCACCGTCAAG CAGGGCTTCAACACCACGCTCGAGGAGTTCACCACCGGCACGGGCCGCCGCGTGTTCGCCAACGCCGAGGACGCACAGGT GCCGAGCGCGCTCGGCAACGTGGTGGATACCGTGCTCGGCCTGCAGAACGTGGTAGTGGCGCATACCTTCCACCACGTGC TGCCGGTGGGCGAGGCGGCACCCGCGCGCGCGGCCGCGGCCGGCACCGCCACCGGCCACAACCCGGTGCAATTCTCGTCG ATCTACGACGCGGGCTCGACGCCCACCGCCGCGAACACCACGGTGGGCATCATCACCTACGGCAACCAGGCCCAGACGGT CAGCGACCTCAACACCTTCGCGAGCCGCAACGGCCTGGCGCCGGTGTCCTCGTCGATCGTCAACACCGGCGGCTCGGGCC GCACCTACAGCAGCGGCGACATCGAATGGCAGCTCGACAGCCAGTCGATCGTCGGCGCGGCGGGCGGCGCGGTGCAGCAG GTGATCTTCTACAACGCGCCCGACGACGCGCAGACCAACCAGGCGCTGCTCGACGACATCTCGAACGCGTTCAACCGCGC CGTCACCGACAACAAGGCAAAGGTGATCAATGTCTCGCTCGGCTGGTGCGAATCGGATGCGGACGGCACCAGCATCCGCG CGGCCGACGACAACATCTTCAAGCAGGCGGTGGCGCAGGGCCAGACGTTCTCGGTATCGAGCGGCGACGAAGGCGCCTAC GAGTGCAGCACGAGCCGCGTGTCGGGCGTGGGCGGCGTGCCGAACACGACGCATTATTCGGTATCGGCACCGGCCAGCTC GCCCTACGTGATCGCCGTGGGCGGCACGACGCTCTACACCTCGGGCAACAAATGGGCGAACGAAACGGTCTGGAACGAGG GGCTGCGGGCGATCGGCTACTACGACAGCGAAGGCGACTACGATTCGACCAAGCGGCTGTGGGCCACCGGCGGCGGCTAC AGCACGGTCGAGGCCGCGCCGTCATGGCAGAGCGCCTCCGTCACCGGCTCGTCGAGCGCGCGGGCGCTGCCCGACATCGC GTTCGACGCGGCCTCGAGCACCGGAGCGATCCTCTACTACAACGGCAGCACCACCGACTCGGACGGCAACCCGAACCAGG TGGGCGGCACCAGCCTCGCCTCGCCGATCTTCGTCGGCATCTGGGCGCGCCTGCAGTCGGCCAACGGCAACGCGCTCGGC TTCCCGGCCGCGAGCATCTACCGGTACTTCCCGAGCAATCCGTCGCTGGTCCACGACGTGACCTCGGGCAACAACGGTAG CGGCAGCTACAAGGGCTTCGCCGCCGCCGCAGGCTGGGACGGCTCGACGGGCTTCGGCAGCATCGACATCTCGCAGCTGA ACGCGTTCATCAAGAGCCACAGCGACTTCGCGCGCTGA
Upstream 100 bases:
>100_bases TCCGCCGGCGGGCACGCGTGCGCCCGGTGGTGCGCCCGCATTCCGCGGGACGGCCGGGCAGCGACTGAAGTCGTTCCAAC ATTCCGAGGGGGAATCTGCA
Downstream 100 bases:
>100_bases CGCGAAACGCGGCGCGCGCGGGCCGGCCACGGCTCGCGCGCGCCGCGGCACGCACGGCCAGGCCCGCTCGGCCGTGCGCC AGAAGCCGCAGACCGGCGCC
Product: Pseudomonalisin
Products: NA
Alternate protein names: Pepstatin-insensitive carboxyl proteinase; Pseudomonapepsin [H]
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MNRVSGKTRQRFTKLLIASAALAAFGASAAQAATQQSWTTTRTKAFLPLVQTASAAAASLTQAAGATRATQPIPLANGAA VHVTVGLKLRNEAQLDQFLAKLQQGSAGTLTPQQFAERYGPTQQQADAVAQYLRASGFTNVQIAPNRLFVTADGTAGTVK QGFNTTLEEFTTGTGRRVFANAEDAQVPSALGNVVDTVLGLQNVVVAHTFHHVLPVGEAAPARAAAAGTATGHNPVQFSS IYDAGSTPTAANTTVGIITYGNQAQTVSDLNTFASRNGLAPVSSSIVNTGGSGRTYSSGDIEWQLDSQSIVGAAGGAVQQ VIFYNAPDDAQTNQALLDDISNAFNRAVTDNKAKVINVSLGWCESDADGTSIRAADDNIFKQAVAQGQTFSVSSGDEGAY ECSTSRVSGVGGVPNTTHYSVSAPASSPYVIAVGGTTLYTSGNKWANETVWNEGLRAIGYYDSEGDYDSTKRLWATGGGY STVEAAPSWQSASVTGSSSARALPDIAFDAASSTGAILYYNGSTTDSDGNPNQVGGTSLASPIFVGIWARLQSANGNALG FPAASIYRYFPSNPSLVHDVTSGNNGSGSYKGFAAAAGWDGSTGFGSIDISQLNAFIKSHSDFAR
Sequences:
>Translated_625_residues MNRVSGKTRQRFTKLLIASAALAAFGASAAQAATQQSWTTTRTKAFLPLVQTASAAAASLTQAAGATRATQPIPLANGAA VHVTVGLKLRNEAQLDQFLAKLQQGSAGTLTPQQFAERYGPTQQQADAVAQYLRASGFTNVQIAPNRLFVTADGTAGTVK QGFNTTLEEFTTGTGRRVFANAEDAQVPSALGNVVDTVLGLQNVVVAHTFHHVLPVGEAAPARAAAAGTATGHNPVQFSS IYDAGSTPTAANTTVGIITYGNQAQTVSDLNTFASRNGLAPVSSSIVNTGGSGRTYSSGDIEWQLDSQSIVGAAGGAVQQ VIFYNAPDDAQTNQALLDDISNAFNRAVTDNKAKVINVSLGWCESDADGTSIRAADDNIFKQAVAQGQTFSVSSGDEGAY ECSTSRVSGVGGVPNTTHYSVSAPASSPYVIAVGGTTLYTSGNKWANETVWNEGLRAIGYYDSEGDYDSTKRLWATGGGY STVEAAPSWQSASVTGSSSARALPDIAFDAASSTGAILYYNGSTTDSDGNPNQVGGTSLASPIFVGIWARLQSANGNALG FPAASIYRYFPSNPSLVHDVTSGNNGSGSYKGFAAAAGWDGSTGFGSIDISQLNAFIKSHSDFAR >Mature_625_residues MNRVSGKTRQRFTKLLIASAALAAFGASAAQAATQQSWTTTRTKAFLPLVQTASAAAASLTQAAGATRATQPIPLANGAA VHVTVGLKLRNEAQLDQFLAKLQQGSAGTLTPQQFAERYGPTQQQADAVAQYLRASGFTNVQIAPNRLFVTADGTAGTVK QGFNTTLEEFTTGTGRRVFANAEDAQVPSALGNVVDTVLGLQNVVVAHTFHHVLPVGEAAPARAAAAGTATGHNPVQFSS IYDAGSTPTAANTTVGIITYGNQAQTVSDLNTFASRNGLAPVSSSIVNTGGSGRTYSSGDIEWQLDSQSIVGAAGGAVQQ VIFYNAPDDAQTNQALLDDISNAFNRAVTDNKAKVINVSLGWCESDADGTSIRAADDNIFKQAVAQGQTFSVSSGDEGAY ECSTSRVSGVGGVPNTTHYSVSAPASSPYVIAVGGTTLYTSGNKWANETVWNEGLRAIGYYDSEGDYDSTKRLWATGGGY STVEAAPSWQSASVTGSSSARALPDIAFDAASSTGAILYYNGSTTDSDGNPNQVGGTSLASPIFVGIWARLQSANGNALG FPAASIYRYFPSNPSLVHDVTSGNNGSGSYKGFAAAAGWDGSTGFGSIDISQLNAFIKSHSDFAR
Specific function: Unknown
COG id: COG4934
COG function: function code O; Predicted protease
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S53 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015366 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF09286 Pro-kuma_activ [H]
EC number: =3.4.21.100 [H]
Molecular weight: Translated: 64487; Mature: 64487
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVSGKTRQRFTKLLIASAALAAFGASAAQAATQQSWTTTRTKAFLPLVQTASAAAASL CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TQAAGATRATQPIPLANGAAVHVTVGLKLRNEAQLDQFLAKLQQGSAGTLTPQQFAERYG HHHCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHCC PTQQQADAVAQYLRASGFTNVQIAPNRLFVTADGTAGTVKQGFNTTLEEFTTGTGRRVFA CCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHCCCHHHHHHCCCCCCEEEE NAEDAQVPSALGNVVDTVLGLQNVVVAHTFHHVLPVGEAAPARAAAAGTATGHNPVQFSS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEE IYDAGSTPTAANTTVGIITYGNQAQTVSDLNTFASRNGLAPVSSSIVNTGGSGRTYSSGD EECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC IEWQLDSQSIVGAAGGAVQQVIFYNAPDDAQTNQALLDDISNAFNRAVTDNKAKVINVSL EEEEECCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE GWCESDADGTSIRAADDNIFKQAVAQGQTFSVSSGDEGAYECSTSRVSGVGGVPNTTHYS EECCCCCCCCEEEECCHHHHHHHHHCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEE VSAPASSPYVIAVGGTTLYTSGNKWANETVWNEGLRAIGYYDSEGDYDSTKRLWATGGGY EECCCCCCEEEEECCEEEEECCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCC STVEAAPSWQSASVTGSSSARALPDIAFDAASSTGAILYYNGSTTDSDGNPNQVGGTSLA CEEECCCCCCCCEECCCCCCCCCCCHHEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH SPIFVGIWARLQSANGNALGFPAASIYRYFPSNPSLVHDVTSGNNGSGSYKGFAAAAGWD HHHHHHHHHHHCCCCCCEECCCHHHHHEECCCCCCEEEEECCCCCCCCCCCCEEEECCCC GSTGFGSIDISQLNAFIKSHSDFAR CCCCCCCEEHHHHHHHHHCCHHCCC >Mature Secondary Structure MNRVSGKTRQRFTKLLIASAALAAFGASAAQAATQQSWTTTRTKAFLPLVQTASAAAASL CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH TQAAGATRATQPIPLANGAAVHVTVGLKLRNEAQLDQFLAKLQQGSAGTLTPQQFAERYG HHHCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHCC PTQQQADAVAQYLRASGFTNVQIAPNRLFVTADGTAGTVKQGFNTTLEEFTTGTGRRVFA CCHHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHCCCHHHHHHCCCCCCEEEE NAEDAQVPSALGNVVDTVLGLQNVVVAHTFHHVLPVGEAAPARAAAAGTATGHNPVQFSS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCEEEEE IYDAGSTPTAANTTVGIITYGNQAQTVSDLNTFASRNGLAPVSSSIVNTGGSGRTYSSGD EECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC IEWQLDSQSIVGAAGGAVQQVIFYNAPDDAQTNQALLDDISNAFNRAVTDNKAKVINVSL EEEEECCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE GWCESDADGTSIRAADDNIFKQAVAQGQTFSVSSGDEGAYECSTSRVSGVGGVPNTTHYS EECCCCCCCCEEEECCHHHHHHHHHCCCEEEECCCCCCCEEECCCCCCCCCCCCCCCEEE VSAPASSPYVIAVGGTTLYTSGNKWANETVWNEGLRAIGYYDSEGDYDSTKRLWATGGGY EECCCCCCEEEEECCEEEEECCCCCCCHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCC STVEAAPSWQSASVTGSSSARALPDIAFDAASSTGAILYYNGSTTDSDGNPNQVGGTSLA CEEECCCCCCCCEECCCCCCCCCCCHHEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH SPIFVGIWARLQSANGNALGFPAASIYRYFPSNPSLVHDVTSGNNGSGSYKGFAAAAGWD HHHHHHHHHHHCCCCCCEECCCHHHHHEECCCCCCEEEEECCCCCCCCCCCCEEEECCCC GSTGFGSIDISQLNAFIKSHSDFAR CCCCCCCEEHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7929375; 8576087; 10488127; 11747435; 11323721 [H]