| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238024179
Identifier: 238024179
GI number: 238024179
Start: 918847
End: 920457
Strand: Reverse
Name: 238024179
Synonym: bglu_2g07580
Alternate gene names: NA
Gene position: 920457-918847 (Counterclockwise)
Preceding gene: 238024182
Following gene: 238024178
Centisome position: 32.56
GC content: 67.47
Gene sequence:
>1611_bases ATGTTCCGCAACACCAAGCCGCGCACCGCGCTGCTGTCCTGTTTCGTGCTCGCAATGCCGTTCTTCGCCGGATGTGGCGG CGGCGACAGCGGCGATGCGCCGGCCGCGATCCAGGTGCCGCAATGCTCGGGCAGCAGCTGTCCGGCCAGCGGCTCGACGA CGACCGCGACCGTCACCAACAAACTCTGTCCTGATGCGCTCGACTACTCGACCACCTACACCGGCGGCTCGGGCAGCGGC GAATACGTGAAGGTGCAGTTCGACACCACCAAGCTCACCTACCAGATGCAGTTCGTCCTGTCATCGGTGCCGACCAGCGC CGGCCAGGTCAACCTCACGCGCGCCGGCAAGACCATCACCGGCACGTTCCACCGCGCCACCTCGCTGCCCACCGCCGAGC AGAACCGCTGCGCGTTCGTGCTCGACAATGGCGCCACGTCGGACGGCAGCTACTCGGTGACGATCAACCCCGTCGACCCT CCGACGCTGTTCGTCGGCAACGGCGTGGTGGGCGGCGGGATTCCGGGCGCGACGATCGAGTTCGACGGCGTCGCGCTGCT CGGCAACCTCGGCGCCGTGCCGTCGCGCACGTTCGACTTCTTCCCGTACATCGGCTTCACCGACACCGAGACCGACTTCA CCAAGGTGGCGGGCAACTACAACGAGCTCGGCATCCACCTGTCGCCGATCGGCACCTCGTACCAGACCGCGAAACCGCAG GGCTGGCAGCCCGACGTGGTCAACTGGAACGAGACGCTGAACGCCGACGGTTCCTGCACGATCACGCCGGGCAGCGACTA CTCGTGCCGCACCACCGGCTCGCCGTGGACGCTGCGCACCAACAGCGACGGCTCGCCCGACAACGTGTTCGTCAGCAAGC CGACCTCGTCGAGCTCGCCGTATCCGAGCGCGGGCCAGGGTCAGCCGATCGTGCTGCTGGCGCCCAGCCAGGCGCAGGGC ATCATGATCGTCGGCAAGCTGCGCGGTGCGCTGATCCCGATCGTGATTCGCGTTGGCCAGGCCTTCGTGCCGTCGAATCC GGCGGACCTGCTGAGCACGGTGGCGGATGCGGAAATCGGCATCTCGGCACTGGCGCCGGCCACGGCGATCGCCTCGAATT CGCTCACGGGCGGCTTCATCGGCGCCACCAGCGCGTCGGCCTGCGGGATCGTGGCCAACAACGGCAACTCCGCCGCTCCG GCCGTTGGCGATGCGAGCTTCAACGCCTCGGTGCCGCACCCCAACCTGCCGGGCATCTATAGCGGAACGTTCTTCGAGCC GACCGCCGGCAACTGCCTGGACGGCACCGCCGTCTCGACGTTCGCGGCGAACTACACGTCGACGCTGTTCAGCGGCGCGA CGGCCGCGTTCATCGATCCGCTCACGTCCAGCAGCAGCAGCACGTTCTCGCTCGACTACACGCAGGCCACCCCGGGCCTC ATCAAGGTGACCGCGCTGCAGGACTTCAACGCGCGCAACGGCAGCGGCCCCGTCGCGATCTTCCACAGCGGCGACACCGG CTGGGCGATCAAGGTGGGCGAGGTCTACGCGATGGTGATGAACAACAGCCAGTACAACCCGTTCTTCACGGTGGGCGCCT TCGTGCAGTAA
Upstream 100 bases:
>100_bases GTAACCGGAGGTCGCCGGTCGAACCGCCGCATCCGCGAGCCGCAGCTCGGTTCGTATCCGATCGACGACAGAAATCCAGT ATCACCAACAAGGAGGGGGT
Downstream 100 bases:
>100_bases CGAAAAGACGGTATCGCAACGAATCGGCGGCAGCATGTCTGTCGCCGATTCTCCAAACAAAATGATCGATAGGATACCTA TCGATCAGGTGAAGATTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MFRNTKPRTALLSCFVLAMPFFAGCGGGDSGDAPAAIQVPQCSGSSCPASGSTTTATVTNKLCPDALDYSTTYTGGSGSG EYVKVQFDTTKLTYQMQFVLSSVPTSAGQVNLTRAGKTITGTFHRATSLPTAEQNRCAFVLDNGATSDGSYSVTINPVDP PTLFVGNGVVGGGIPGATIEFDGVALLGNLGAVPSRTFDFFPYIGFTDTETDFTKVAGNYNELGIHLSPIGTSYQTAKPQ GWQPDVVNWNETLNADGSCTITPGSDYSCRTTGSPWTLRTNSDGSPDNVFVSKPTSSSSPYPSAGQGQPIVLLAPSQAQG IMIVGKLRGALIPIVIRVGQAFVPSNPADLLSTVADAEIGISALAPATAIASNSLTGGFIGATSASACGIVANNGNSAAP AVGDASFNASVPHPNLPGIYSGTFFEPTAGNCLDGTAVSTFAANYTSTLFSGATAAFIDPLTSSSSSTFSLDYTQATPGL IKVTALQDFNARNGSGPVAIFHSGDTGWAIKVGEVYAMVMNNSQYNPFFTVGAFVQ
Sequences:
>Translated_536_residues MFRNTKPRTALLSCFVLAMPFFAGCGGGDSGDAPAAIQVPQCSGSSCPASGSTTTATVTNKLCPDALDYSTTYTGGSGSG EYVKVQFDTTKLTYQMQFVLSSVPTSAGQVNLTRAGKTITGTFHRATSLPTAEQNRCAFVLDNGATSDGSYSVTINPVDP PTLFVGNGVVGGGIPGATIEFDGVALLGNLGAVPSRTFDFFPYIGFTDTETDFTKVAGNYNELGIHLSPIGTSYQTAKPQ GWQPDVVNWNETLNADGSCTITPGSDYSCRTTGSPWTLRTNSDGSPDNVFVSKPTSSSSPYPSAGQGQPIVLLAPSQAQG IMIVGKLRGALIPIVIRVGQAFVPSNPADLLSTVADAEIGISALAPATAIASNSLTGGFIGATSASACGIVANNGNSAAP AVGDASFNASVPHPNLPGIYSGTFFEPTAGNCLDGTAVSTFAANYTSTLFSGATAAFIDPLTSSSSSTFSLDYTQATPGL IKVTALQDFNARNGSGPVAIFHSGDTGWAIKVGEVYAMVMNNSQYNPFFTVGAFVQ >Mature_536_residues MFRNTKPRTALLSCFVLAMPFFAGCGGGDSGDAPAAIQVPQCSGSSCPASGSTTTATVTNKLCPDALDYSTTYTGGSGSG EYVKVQFDTTKLTYQMQFVLSSVPTSAGQVNLTRAGKTITGTFHRATSLPTAEQNRCAFVLDNGATSDGSYSVTINPVDP PTLFVGNGVVGGGIPGATIEFDGVALLGNLGAVPSRTFDFFPYIGFTDTETDFTKVAGNYNELGIHLSPIGTSYQTAKPQ GWQPDVVNWNETLNADGSCTITPGSDYSCRTTGSPWTLRTNSDGSPDNVFVSKPTSSSSPYPSAGQGQPIVLLAPSQAQG IMIVGKLRGALIPIVIRVGQAFVPSNPADLLSTVADAEIGISALAPATAIASNSLTGGFIGATSASACGIVANNGNSAAP AVGDASFNASVPHPNLPGIYSGTFFEPTAGNCLDGTAVSTFAANYTSTLFSGATAAFIDPLTSSSSSTFSLDYTQATPGL IKVTALQDFNARNGSGPVAIFHSGDTGWAIKVGEVYAMVMNNSQYNPFFTVGAFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54981; Mature: 54981
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRNTKPRTALLSCFVLAMPFFAGCGGGDSGDAPAAIQVPQCSGSSCPASGSTTTATVTN CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEC KLCPDALDYSTTYTGGSGSGEYVKVQFDTTKLTYQMQFVLSSVPTSAGQVNLTRAGKTIT CCCCCCCCCCEEECCCCCCCCEEEEEEECEEEEEEEEEHHHHCCCCCCEEEEEECCCEEE GTFHRATSLPTAEQNRCAFVLDNGATSDGSYSVTINPVDPPTLFVGNGVVGGGIPGATIE EEEEHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCEECCCCCCCEEE FDGVALLGNLGAVPSRTFDFFPYIGFTDTETDFTKVAGNYNELGIHLSPIGTSYQTAKPQ ECCEEEEECCCCCCCCCEECCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCC GWQPDVVNWNETLNADGSCTITPGSDYSCRTTGSPWTLRTNSDGSPDNVFVSKPTSSSSP CCCCCCCCCCCEECCCCCEEECCCCCCCEEECCCCEEEEECCCCCCCEEEEECCCCCCCC YPSAGQGQPIVLLAPSQAQGIMIVGKLRGALIPIVIRVGQAFVPSNPADLLSTVADAEIG CCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEHHEECCCCCCCCCHHHHHHHHHHHHCC ISALAPATAIASNSLTGGFIGATSASACGIVANNGNSAAPAVGDASFNASVPHPNLPGIY HHHHCCHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC SGTFFEPTAGNCLDGTAVSTFAANYTSTLFSGATAAFIDPLTSSSSSTFSLDYTQATPGL CCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCE IKVTALQDFNARNGSGPVAIFHSGDTGWAIKVGEVYAMVMNNSQYNPFFTVGAFVQ EEEEEEECCCCCCCCCCEEEEECCCCCEEEEECEEEEEEECCCCCCCEEEECEECC >Mature Secondary Structure MFRNTKPRTALLSCFVLAMPFFAGCGGGDSGDAPAAIQVPQCSGSSCPASGSTTTATVTN CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEC KLCPDALDYSTTYTGGSGSGEYVKVQFDTTKLTYQMQFVLSSVPTSAGQVNLTRAGKTIT CCCCCCCCCCEEECCCCCCCCEEEEEEECEEEEEEEEEHHHHCCCCCCEEEEEECCCEEE GTFHRATSLPTAEQNRCAFVLDNGATSDGSYSVTINPVDPPTLFVGNGVVGGGIPGATIE EEEEHHCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEECCEECCCCCCCEEE FDGVALLGNLGAVPSRTFDFFPYIGFTDTETDFTKVAGNYNELGIHLSPIGTSYQTAKPQ ECCEEEEECCCCCCCCCEECCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCC GWQPDVVNWNETLNADGSCTITPGSDYSCRTTGSPWTLRTNSDGSPDNVFVSKPTSSSSP CCCCCCCCCCCEECCCCCEEECCCCCCCEEECCCCEEEEECCCCCCCEEEEECCCCCCCC YPSAGQGQPIVLLAPSQAQGIMIVGKLRGALIPIVIRVGQAFVPSNPADLLSTVADAEIG CCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEHHEECCCCCCCCCHHHHHHHHHHHHCC ISALAPATAIASNSLTGGFIGATSASACGIVANNGNSAAPAVGDASFNASVPHPNLPGIY HHHHCCHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC SGTFFEPTAGNCLDGTAVSTFAANYTSTLFSGATAAFIDPLTSSSSSTFSLDYTQATPGL CCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCE IKVTALQDFNARNGSGPVAIFHSGDTGWAIKVGEVYAMVMNNSQYNPFFTVGAFVQ EEEEEEECCCCCCCCCCEEEEECCCCCEEEEECEEEEEEECCCCCCCEEEECEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA