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The map label for this gene is pgl [H]

Identifier: 238024144

GI number: 238024144

Start: 850934

End: 852955

Strand: Reverse

Name: pgl [H]

Synonym: bglu_2g07210

Alternate gene names: 238024144

Gene position: 852955-850934 (Counterclockwise)

Preceding gene: 238024145

Following gene: 238024143

Centisome position: 30.17

GC content: 68.6

Gene sequence:

>2022_bases
GTGAGCAAACGCGAACTCGAGACGAAAGCGAGCGACTCGGCGCAGCAGGAAACGCTTAGGATGACTCGGCGGCATTTCAT
CGGCTTCAGCGGCGCGCTGATGGGCAGCGCGCTGCTGGGCGGCTGCGGCGGCGGCGACGACGCGCCGGCCTCGACCACCG
GCGCCGCCACGCCAAGCGCGCCGGCCACGCCGGCCGATCCGATCTGGGGGGCGAACGGCGCGGCCACCAACATCATCGCC
TCGCTGAACGGCATCACGCAGTCGGCGTTTCGCGCCGTCGACTACCCGGTGGAAGCGTATGGCGCGCAGCCGTGCCCGGT
GGTCGCGCAGACCAGCCCCTACACCGACCTCACCAAGTCGCCGGTGAGCCCGGGGGCGGGCGCCACGCCGGGCGCCGGCG
CATTCGACTCGCGGCCGGCCTTCCTCGCCGCGATCGCCGCCTGCTCGGCGGCGGGCGGCGGGCGCGTGGTGGTGCCGGCG
GGCAGCTGGTATTGCGCCGGGCCGATCGTGCTGCAAAGCAACGTCAACTTCCACCTGAGCGCCAACTGCACGATCTTCTT
CAGCCCCAACCCGGCCGATTACGCCAAGGACGGCCCGGTCAACTGCGGCGCGAACGGCAACCTCTACTACAGCCGCTGGC
AGGCCAACGACTGCCTGAACTTCGGCGCGCCCGTGTACGCGCGCAACGCCAACAACATCGCGCTGACCGGCGAAGGCCCG
ACCTCCACGCTCAACGGCCAGGCGATGACGCCGTTCGCCGGCTCGGGCAACACGGCCACCTGCTGGTGGACCTACAAGGG
CAGCTCCGGCGCCTATGGCTGCGCCGGTTCGAGCACGCCCTCGCAGGCCTACACGAACCCGAACAACGTCGACCTGAAGA
CTGTCGCGCCCGGCATCTCCAGCGCGCTCTACACGCTGCTGACCAACCCCACCACGCCGTGGCAGCAGGACCAGAACTAC
CTGCCCGCGCTGTCGGAGGCGGGCGTGCCGGTGGCCCAGCGGATCTTCGGTCTCGGCCACTTCCTGCGGCCGTGCATGGT
GGAGTTCATCGGCTGCACCAACGTGCTGATGGAGAACTACCACACCCAGAACACGCCGTTCTGGCAGCACCACCCCACCG
ACTGCACCAACGTCGTGATCCGCGGCGTGATGGCCGACAGCATCGGGCCGAACAACGACGGCTTCGATCCCGACGCCTGC
AACAACGTGCTGTGCGACGGCATGGTGTTCAATACCGGCGACGACTGCATCGCCATCAAGTCGGGCAAGGATCTCGACAC
CGAATACGGCGCGGCGCAGAACCATGTCGTGCAGAACTGCACGATGAACAGCGGGCACGGCGGCATCACGCTGGGCAGCG
AGATGGGCGGCGGCATCGAGAACGTCTACGCGCGCAACCTGACGATGCTGAACCAGTTCTGGGCCACCAACTCCCTGAAC
ATCGCGATCCGCATCAAGACCAACATGAACCGCGGCGGCTTCGTGCGCAACTTCTACGTCAACGGCGTCACGCTGCCGAA
CGGCGTGAGCCTGACGGGAGGCGGCTACGGCAGCAAGCTGCTCACCGGCAGCCCGATCAACGCCACCGTGCCGCTCGGCG
TGGCCAGCGCGACGGCCGGCAACCCGTCGGCCTCGCAGGGCGGCCTGATCACGTTCGACTGCGACTACCAGCCGGCCGGC
GACGCGATCCGCACGCGGCCGGCGCTGGTGCAGAACGTCAACATCACCAACGTGACGGCCAGCAACGTCACGCTCGGCAG
CGCGACCGGCTCGTGCTTCCAGGCGATCGTCGCGCAGGGCCCGGTGGCGTTCGACTACAACGGCGCGGCGCCGACGCCGG
CGATTCCCGCCATCACGGGGGTGACGATCTCGAACTGCGATTTCGGCACGCCGGTCGCGGCCGGCCCGGCCAGCACCACC
ACGCCCGGACCGATCTACGCCTGGAACGTCAACGGCATCACGCTGCAGAACGTCAAGATCGCCGGGCAGCTCTACAACAC
CACGATCACCGACGCACGCTGA

Upstream 100 bases:

>100_bases
GGCGCTGCCGGCGTATCATCATCATGTCATCGTATGACGTAAGACCGTTGCCCAGCCGCACATTTTTTATCGACAAGACC
AAGACAGGACGGAGACCACA

Downstream 100 bases:

>100_bases
CCAATCAGGCGCGAGCCGCCCGCGTCGACATTTCTCCGGCCCCCGCGCGGGGCCGCGCCGTTGCGGCGCCGGGCTGCTCG
GCCGGGCAAGCCGGCTGCGG

Product: glycoside hydrolase

Products: NA

Alternate protein names: PGL; Pectinase [H]

Number of amino acids: Translated: 673; Mature: 672

Protein sequence:

>673_residues
MSKRELETKASDSAQQETLRMTRRHFIGFSGALMGSALLGGCGGGDDAPASTTGAATPSAPATPADPIWGANGAATNIIA
SLNGITQSAFRAVDYPVEAYGAQPCPVVAQTSPYTDLTKSPVSPGAGATPGAGAFDSRPAFLAAIAACSAAGGGRVVVPA
GSWYCAGPIVLQSNVNFHLSANCTIFFSPNPADYAKDGPVNCGANGNLYYSRWQANDCLNFGAPVYARNANNIALTGEGP
TSTLNGQAMTPFAGSGNTATCWWTYKGSSGAYGCAGSSTPSQAYTNPNNVDLKTVAPGISSALYTLLTNPTTPWQQDQNY
LPALSEAGVPVAQRIFGLGHFLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIRGVMADSIGPNNDGFDPDAC
NNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNHVVQNCTMNSGHGGITLGSEMGGGIENVYARNLTMLNQFWATNSLN
IAIRIKTNMNRGGFVRNFYVNGVTLPNGVSLTGGGYGSKLLTGSPINATVPLGVASATAGNPSASQGGLITFDCDYQPAG
DAIRTRPALVQNVNITNVTASNVTLGSATGSCFQAIVAQGPVAFDYNGAAPTPAIPAITGVTISNCDFGTPVAAGPASTT
TPGPIYAWNVNGITLQNVKIAGQLYNTTITDAR

Sequences:

>Translated_673_residues
MSKRELETKASDSAQQETLRMTRRHFIGFSGALMGSALLGGCGGGDDAPASTTGAATPSAPATPADPIWGANGAATNIIA
SLNGITQSAFRAVDYPVEAYGAQPCPVVAQTSPYTDLTKSPVSPGAGATPGAGAFDSRPAFLAAIAACSAAGGGRVVVPA
GSWYCAGPIVLQSNVNFHLSANCTIFFSPNPADYAKDGPVNCGANGNLYYSRWQANDCLNFGAPVYARNANNIALTGEGP
TSTLNGQAMTPFAGSGNTATCWWTYKGSSGAYGCAGSSTPSQAYTNPNNVDLKTVAPGISSALYTLLTNPTTPWQQDQNY
LPALSEAGVPVAQRIFGLGHFLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIRGVMADSIGPNNDGFDPDAC
NNVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNHVVQNCTMNSGHGGITLGSEMGGGIENVYARNLTMLNQFWATNSLN
IAIRIKTNMNRGGFVRNFYVNGVTLPNGVSLTGGGYGSKLLTGSPINATVPLGVASATAGNPSASQGGLITFDCDYQPAG
DAIRTRPALVQNVNITNVTASNVTLGSATGSCFQAIVAQGPVAFDYNGAAPTPAIPAITGVTISNCDFGTPVAAGPASTT
TPGPIYAWNVNGITLQNVKIAGQLYNTTITDAR
>Mature_672_residues
SKRELETKASDSAQQETLRMTRRHFIGFSGALMGSALLGGCGGGDDAPASTTGAATPSAPATPADPIWGANGAATNIIAS
LNGITQSAFRAVDYPVEAYGAQPCPVVAQTSPYTDLTKSPVSPGAGATPGAGAFDSRPAFLAAIAACSAAGGGRVVVPAG
SWYCAGPIVLQSNVNFHLSANCTIFFSPNPADYAKDGPVNCGANGNLYYSRWQANDCLNFGAPVYARNANNIALTGEGPT
STLNGQAMTPFAGSGNTATCWWTYKGSSGAYGCAGSSTPSQAYTNPNNVDLKTVAPGISSALYTLLTNPTTPWQQDQNYL
PALSEAGVPVAQRIFGLGHFLRPCMVEFIGCTNVLMENYHTQNTPFWQHHPTDCTNVVIRGVMADSIGPNNDGFDPDACN
NVLCDGMVFNTGDDCIAIKSGKDLDTEYGAAQNHVVQNCTMNSGHGGITLGSEMGGGIENVYARNLTMLNQFWATNSLNI
AIRIKTNMNRGGFVRNFYVNGVTLPNGVSLTGGGYGSKLLTGSPINATVPLGVASATAGNPSASQGGLITFDCDYQPAGD
AIRTRPALVQNVNITNVTASNVTLGSATGSCFQAIVAQGPVAFDYNGAAPTPAIPAITGVTISNCDFGTPVAAGPASTTT
PGPIYAWNVNGITLQNVKIAGQLYNTTITDAR

Specific function: Seems to regulates the surface properties of the bacterium in the presence of plant cells or plant cell extracts [H]

COG id: COG5434

COG function: function code M; Endopolygalacturonase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 PbH1 repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000743
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF00295 Glyco_hydro_28 [H]

EC number: =3.2.1.15 [H]

Molecular weight: Translated: 69397; Mature: 69266

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS00502 POLYGALACTURONASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRELETKASDSAQQETLRMTRRHFIGFSGALMGSALLGGCGGGDDAPASTTGAATPSA
CCCHHCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PATPADPIWGANGAATNIIASLNGITQSAFRAVDYPVEAYGAQPCPVVAQTSPYTDLTKS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCC
PVSPGAGATPGAGAFDSRPAFLAAIAACSAAGGGRVVVPAGSWYCAGPIVLQSNVNFHLS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEECCCEEEECCCCEEEE
ANCTIFFSPNPADYAKDGPVNCGANGNLYYSRWQANDCLNFGAPVYARNANNIALTGEGP
EEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEECCCC
TSTLNGQAMTPFAGSGNTATCWWTYKGSSGAYGCAGSSTPSQAYTNPNNVDLKTVAPGIS
CCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH
SALYTLLTNPTTPWQQDQNYLPALSEAGVPVAQRIFGLGHFLRPCMVEFIGCTNVLMENY
HHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HTQNTPFWQHHPTDCTNVVIRGVMADSIGPNNDGFDPDACNNVLCDGMVFNTGDDCIAIK
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCEEEECCCCEEEEE
SGKDLDTEYGAAQNHVVQNCTMNSGHGGITLGSEMGGGIENVYARNLTMLNQFWATNSLN
CCCCCCCCCCCCCCCEEHCCCCCCCCCCEEECHHCCCCHHHHHHHHHHHHHHHHCCCCEE
IAIRIKTNMNRGGFVRNFYVNGVTLPNGVSLTGGGYGSKLLTGSPINATVPLGVASATAG
EEEEEEECCCCCCEEEEEEECCEECCCCEEEECCCCCCCEEECCCCCEEECCCEEECCCC
NPSASQGGLITFDCDYQPAGDAIRTRPALVQNVNITNVTASNVTLGSATGSCFQAIVAQG
CCCCCCCCEEEEECCCCCCCCHHHCCCHHHEECCEEEEEECCEEECCCCHHHHHHHHHCC
PVAFDYNGAAPTPAIPAITGVTISNCDFGTPVAAGPASTTTPGPIYAWNVNGITLQNVKI
CEEEECCCCCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEE
AGQLYNTTITDAR
EEEEEECEECCCC
>Mature Secondary Structure 
SKRELETKASDSAQQETLRMTRRHFIGFSGALMGSALLGGCGGGDDAPASTTGAATPSA
CCHHCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PATPADPIWGANGAATNIIASLNGITQSAFRAVDYPVEAYGAQPCPVVAQTSPYTDLTKS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCCCCCCC
PVSPGAGATPGAGAFDSRPAFLAAIAACSAAGGGRVVVPAGSWYCAGPIVLQSNVNFHLS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCEEECCCEEEECCCCEEEE
ANCTIFFSPNPADYAKDGPVNCGANGNLYYSRWQANDCLNFGAPVYARNANNIALTGEGP
EEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCEEEECCCC
TSTLNGQAMTPFAGSGNTATCWWTYKGSSGAYGCAGSSTPSQAYTNPNNVDLKTVAPGIS
CCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHH
SALYTLLTNPTTPWQQDQNYLPALSEAGVPVAQRIFGLGHFLRPCMVEFIGCTNVLMENY
HHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HTQNTPFWQHHPTDCTNVVIRGVMADSIGPNNDGFDPDACNNVLCDGMVFNTGDDCIAIK
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCEEEECCCCEEEEE
SGKDLDTEYGAAQNHVVQNCTMNSGHGGITLGSEMGGGIENVYARNLTMLNQFWATNSLN
CCCCCCCCCCCCCCCEEHCCCCCCCCCCEEECHHCCCCHHHHHHHHHHHHHHHHCCCCEE
IAIRIKTNMNRGGFVRNFYVNGVTLPNGVSLTGGGYGSKLLTGSPINATVPLGVASATAG
EEEEEEECCCCCCEEEEEEECCEECCCCEEEECCCCCCCEEECCCCCEEECCCEEECCCC
NPSASQGGLITFDCDYQPAGDAIRTRPALVQNVNITNVTASNVTLGSATGSCFQAIVAQG
CCCCCCCCEEEEECCCCCCCCHHHCCCHHHEECCEEEEEECCEEECCCCHHHHHHHHHCC
PVAFDYNGAAPTPAIPAITGVTISNCDFGTPVAAGPASTTTPGPIYAWNVNGITLQNVKI
CEEEECCCCCCCCCCCCEECEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEE
AGQLYNTTITDAR
EEEEEECEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1860822 [H]