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The map label for this gene is yedQ [H]

Identifier: 238024145

GI number: 238024145

Start: 853581

End: 855383

Strand: Reverse

Name: yedQ [H]

Synonym: bglu_2g07220

Alternate gene names: 238024145

Gene position: 855383-853581 (Counterclockwise)

Preceding gene: 238024146

Following gene: 238024144

Centisome position: 30.25

GC content: 73.04

Gene sequence:

>1803_bases
ATGCTGACAACCGACACCGGCGGGACCCAGGTCGCGCCAGCCGGCGGCCCGCCGGTGGATGCCGAATGCACCGCGCTGCT
GCATCTGGCGCGCGCGCATTTCGGCAGCGCCACGGCGCTGATTGTGGTGCCGGCCGCCGGAGCGATGCCTCCGCTCGCCC
ATGTCGGCGCCTGGCCGATGCCGCTGCCGGCCGATCCGTTCGCGGCCGATCCGTTCGCGGCCGACGCCGGCCGCGCGCCC
GGCGGTCGGGCGCCGGCCGTGCTGCCTCGCGAGGGCCAGGCCTGGCTGCCGCTGCCCACCGCTGCCGCCGCGCCGGCCCA
GGCTCCCGGCTGCTATGCCGCCTGCGCGCTGCGAGGCCGCCACGGCGGCCACCTCGGCACGCTGCTGCTGCTCGACGCGG
CGCCGCGCACGCTCGACGCCGCCCAGCATGCGTTCCTCGCCCATCTGGCCAGCGCGGCCGGCCCGGCGCTGGAGCGGCTG
CTGGCCAGCACCGCCGGCGTCGAGGCCGGCGCGCCGATCGCGCACGACCTGGTCGCGCTGGCGCTGAAAGGCAGCGGCAC
CGGCATCTGGGATCGCGACGTGGCCGCGGGCGAGATCCGTTACTCGGCGGAATGGAAGGCGATACTCGGCTACGAGCCGC
ACGAGCTGAGCCACCGCATCGAGGACGCGGTCGAGCGCGTGCATCCCGACGATCGCGCCTATGTGCAGGCCGAGATGCGC
ACGCACCTCGAGGGCGGCTCGGACCGCTACGAGGTGGAGCACCGGATTCGCTGCAAGGACGGCAGCTACAAGTGGATCTG
CAGCCGCGGCAAGGTGGTGAGCCGCGATCTCGCGGGCCGCGCGCTGCGGATGGTCGGCGCCACCACCGACATCACCGCGC
TGCGCGAGGCGGTCATGCGCCATCAGCAGACCATCGACCTGATCACGAACCTGACCGACGAGGTGGTCGGCCTGGTGTTC
CAGTATCGCGAGACGGCGGACGGGCGGCGCTTCTTCAGCTACGCGAGCCGCGGCATCGAGCAGATCTACGAGCTCGACGC
CAAGGACGTGGCGACCAGCGCGGAGGCGGTCGATGCGCGCATCGATGCGCGCGATCTGGCGGCCTACCGGCGCTCGCTGC
GCGAGTCGGCCGCGAACCTCAGCCCGTGGCGCCTCGAGTACCGCGTCTGGCTGCCGCGCCAGGGGCTGCGCTGGCGGCAG
GGCGAGGCGCGGCCGCAACGGCTGCCCGAGGGCGGCACGCTGTGGCACGGCTTCATCACCGACGTGACCGAGCGCAAGCG
GATCGAGACCGAGCTGCACGAGCTCGCCACCACCGACCATCTGACCGAACTCTCGAACCGGCGCGACTTCCTGGCCCGCA
GCGAAGCGGAACTCGCGAGGCTGCGGCACGCCGGCCGCGGCGCGACCGCCGTGCTGATGCTCGACCTCGATCACTTCAAG
TCGCTCAACGACCGCTGGGGTCATGCGCTCGGCGATCGCGCGCTGCGCCACTTCGCGCAGCTGCTGCGACAGGAGGCGCG
CGGCAACGACATCGTCGGGCGCATCGGCGGCGAGGAGTTCGCCGTGGTGCTGCCGGGCCTCGGCATCGACGCCGCGCTCG
CCTTCGGGATGCGGCTGCAGCGGCGCATGAGCACCTCGCCGCTGGCCCTGGACGATCGGCTGGTGGTGCTGACGGTCAGC
ATCGGCGTCGATCGGATGATCCCGACCGATCCCGGCGTCGACCAGGTGCTCACGCGCTGCGACAAGGCGCTCTATCTGGC
CAAGGCGCGCGGGCGCAACCGCGTCGAGCTGTACGGCGAGTGA

Upstream 100 bases:

>100_bases
TCCAGATCGTCAACGATCCGATTTATCATGGCGCGTCCAAGCCGGCGCGCGAGCGGCCCTTGCCGCGCCCGCGCCGCGGT
CGCTTCCCCTCTCCTTGCGT

Downstream 100 bases:

>100_bases
GGCGCCCCCGCGCGTGCCGATCGCGCCGGTCTCGGCCCGGGCCGGCGCGCGCGGGGAGCCGCGGGCGCGCGCCGGCGCGT
CATGTCCTGGCCGGCATCGC

Product: PAS/PAC sensor-containing diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MLTTDTGGTQVAPAGGPPVDAECTALLHLARAHFGSATALIVVPAAGAMPPLAHVGAWPMPLPADPFAADPFAADAGRAP
GGRAPAVLPREGQAWLPLPTAAAAPAQAPGCYAACALRGRHGGHLGTLLLLDAAPRTLDAAQHAFLAHLASAAGPALERL
LASTAGVEAGAPIAHDLVALALKGSGTGIWDRDVAAGEIRYSAEWKAILGYEPHELSHRIEDAVERVHPDDRAYVQAEMR
THLEGGSDRYEVEHRIRCKDGSYKWICSRGKVVSRDLAGRALRMVGATTDITALREAVMRHQQTIDLITNLTDEVVGLVF
QYRETADGRRFFSYASRGIEQIYELDAKDVATSAEAVDARIDARDLAAYRRSLRESAANLSPWRLEYRVWLPRQGLRWRQ
GEARPQRLPEGGTLWHGFITDVTERKRIETELHELATTDHLTELSNRRDFLARSEAELARLRHAGRGATAVLMLDLDHFK
SLNDRWGHALGDRALRHFAQLLRQEARGNDIVGRIGGEEFAVVLPGLGIDAALAFGMRLQRRMSTSPLALDDRLVVLTVS
IGVDRMIPTDPGVDQVLTRCDKALYLAKARGRNRVELYGE

Sequences:

>Translated_600_residues
MLTTDTGGTQVAPAGGPPVDAECTALLHLARAHFGSATALIVVPAAGAMPPLAHVGAWPMPLPADPFAADPFAADAGRAP
GGRAPAVLPREGQAWLPLPTAAAAPAQAPGCYAACALRGRHGGHLGTLLLLDAAPRTLDAAQHAFLAHLASAAGPALERL
LASTAGVEAGAPIAHDLVALALKGSGTGIWDRDVAAGEIRYSAEWKAILGYEPHELSHRIEDAVERVHPDDRAYVQAEMR
THLEGGSDRYEVEHRIRCKDGSYKWICSRGKVVSRDLAGRALRMVGATTDITALREAVMRHQQTIDLITNLTDEVVGLVF
QYRETADGRRFFSYASRGIEQIYELDAKDVATSAEAVDARIDARDLAAYRRSLRESAANLSPWRLEYRVWLPRQGLRWRQ
GEARPQRLPEGGTLWHGFITDVTERKRIETELHELATTDHLTELSNRRDFLARSEAELARLRHAGRGATAVLMLDLDHFK
SLNDRWGHALGDRALRHFAQLLRQEARGNDIVGRIGGEEFAVVLPGLGIDAALAFGMRLQRRMSTSPLALDDRLVVLTVS
IGVDRMIPTDPGVDQVLTRCDKALYLAKARGRNRVELYGE
>Mature_600_residues
MLTTDTGGTQVAPAGGPPVDAECTALLHLARAHFGSATALIVVPAAGAMPPLAHVGAWPMPLPADPFAADPFAADAGRAP
GGRAPAVLPREGQAWLPLPTAAAAPAQAPGCYAACALRGRHGGHLGTLLLLDAAPRTLDAAQHAFLAHLASAAGPALERL
LASTAGVEAGAPIAHDLVALALKGSGTGIWDRDVAAGEIRYSAEWKAILGYEPHELSHRIEDAVERVHPDDRAYVQAEMR
THLEGGSDRYEVEHRIRCKDGSYKWICSRGKVVSRDLAGRALRMVGATTDITALREAVMRHQQTIDLITNLTDEVVGLVF
QYRETADGRRFFSYASRGIEQIYELDAKDVATSAEAVDARIDARDLAAYRRSLRESAANLSPWRLEYRVWLPRQGLRWRQ
GEARPQRLPEGGTLWHGFITDVTERKRIETELHELATTDHLTELSNRRDFLARSEAELARLRHAGRGATAVLMLDLDHFK
SLNDRWGHALGDRALRHFAQLLRQEARGNDIVGRIGGEEFAVVLPGLGIDAALAFGMRLQRRMSTSPLALDDRLVVLTVS
IGVDRMIPTDPGVDQVLTRCDKALYLAKARGRNRVELYGE

Specific function: Involves in the regulation of cellulose production [H]

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=178, Percent_Identity=37.0786516853933, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI87082007, Length=183, Percent_Identity=34.9726775956284, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI87081881, Length=186, Percent_Identity=37.6344086021505, Blast_Score=105, Evalue=7e-24,
Organism=Escherichia coli, GI145693134, Length=173, Percent_Identity=38.728323699422, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788381, Length=180, Percent_Identity=31.1111111111111, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1787802, Length=173, Percent_Identity=32.3699421965318, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1787816, Length=165, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI1787262, Length=169, Percent_Identity=31.9526627218935, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1788085, Length=165, Percent_Identity=30.9090909090909, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1787541, Length=181, Percent_Identity=30.3867403314917, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87081977, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 65241; Mature: 65241

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTDTGGTQVAPAGGPPVDAECTALLHLARAHFGSATALIVVPAAGAMPPLAHVGAWPM
CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCCC
PLPADPFAADPFAADAGRAPGGRAPAVLPREGQAWLPLPTAAAAPAQAPGCYAACALRGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
HGGHLGTLLLLDAAPRTLDAAQHAFLAHLASAAGPALERLLASTAGVEAGAPIAHDLVAL
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH
ALKGSGTGIWDRDVAAGEIRYSAEWKAILGYEPHELSHRIEDAVERVHPDDRAYVQAEMR
EEECCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
THLEGGSDRYEVEHRIRCKDGSYKWICSRGKVVSRDLAGRALRMVGATTDITALREAVMR
HHCCCCCCCEEEEEEEEECCCCEEEEECCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHH
HQQTIDLITNLTDEVVGLVFQYRETADGRRFFSYASRGIEQIYELDAKDVATSAEAVDAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IDARDLAAYRRSLRESAANLSPWRLEYRVWLPRQGLRWRQGEARPQRLPEGGTLWHGFIT
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCEEHHHHH
DVTERKRIETELHELATTDHLTELSNRRDFLARSEAELARLRHAGRGATAVLMLDLDHFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHH
SLNDRWGHALGDRALRHFAQLLRQEARGNDIVGRIGGEEFAVVLPGLGIDAALAFGMRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHH
RRMSTSPLALDDRLVVLTVSIGVDRMIPTDPGVDQVLTRCDKALYLAKARGRNRVELYGE
HHCCCCCCEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MLTTDTGGTQVAPAGGPPVDAECTALLHLARAHFGSATALIVVPAAGAMPPLAHVGAWPM
CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHCCCCCC
PLPADPFAADPFAADAGRAPGGRAPAVLPREGQAWLPLPTAAAAPAQAPGCYAACALRGR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
HGGHLGTLLLLDAAPRTLDAAQHAFLAHLASAAGPALERLLASTAGVEAGAPIAHDLVAL
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHH
ALKGSGTGIWDRDVAAGEIRYSAEWKAILGYEPHELSHRIEDAVERVHPDDRAYVQAEMR
EEECCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
THLEGGSDRYEVEHRIRCKDGSYKWICSRGKVVSRDLAGRALRMVGATTDITALREAVMR
HHCCCCCCCEEEEEEEEECCCCEEEEECCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHHH
HQQTIDLITNLTDEVVGLVFQYRETADGRRFFSYASRGIEQIYELDAKDVATSAEAVDAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
IDARDLAAYRRSLRESAANLSPWRLEYRVWLPRQGLRWRQGEARPQRLPEGGTLWHGFIT
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCEEHHHHH
DVTERKRIETELHELATTDHLTELSNRRDFLARSEAELARLRHAGRGATAVLMLDLDHFK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHH
SLNDRWGHALGDRALRHFAQLLRQEARGNDIVGRIGGEEFAVVLPGLGIDAALAFGMRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHH
RRMSTSPLALDDRLVVLTVSIGVDRMIPTDPGVDQVLTRCDKALYLAKARGRNRVELYGE
HHCCCCCCEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]