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The map label for this gene is yoaF [H]

Identifier: 238024095

GI number: 238024095

Start: 789733

End: 789999

Strand: Direct

Name: yoaF [H]

Synonym: bglu_2g06600

Alternate gene names: 238024095

Gene position: 789733-789999 (Clockwise)

Preceding gene: 238024090

Following gene: 238024097

Centisome position: 27.93

GC content: 58.8

Gene sequence:

>267_bases
ATGCCTATGTCCAGAGCGATCATGTCCACACTCGTTTTTTCAGGTGCTCTAGTGTCCGGTTGCAGCACGGGTAACGACCC
GCCGTCCGAAGCCCCAATCGTGGAGATGGCGAATCCCGCGTCGGTCTACTGCGAGAGCCTGGGAGGCCGGAGCGTGAGCG
TTAAAGACAAGGACGGCGCGGCGTACGCGATCTGCCATCTGCCGGATGGCACGCAAATTGAGGAATGGGCGTTGTATCGT
CGTGACCATCCGCAATCGAGTAAGTGA

Upstream 100 bases:

>100_bases
TAAGCGAACTTTTACTGGCGTCCTGTACAGCCCAGCTTGACTGACGAGTCGTAATGCGGTGAACTCGCAGCATCACTGCT
ATTCAACCCGGTTTGCCCCC

Downstream 100 bases:

>100_bases
TCGATCCTGGTTTCACGCTGGGACGTATTTAGCGAATACCGGCTGACGAACGAGCGCTCGTTGTTTTGCTGGCTAGGCTG
CCGGCGGTCATCTACTCACG

Product: putative hemolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MPMSRAIMSTLVFSGALVSGCSTGNDPPSEAPIVEMANPASVYCESLGGRSVSVKDKDGAAYAICHLPDGTQIEEWALYR
RDHPQSSK

Sequences:

>Translated_88_residues
MPMSRAIMSTLVFSGALVSGCSTGNDPPSEAPIVEMANPASVYCESLGGRSVSVKDKDGAAYAICHLPDGTQIEEWALYR
RDHPQSSK
>Mature_87_residues
PMSRAIMSTLVFSGALVSGCSTGNDPPSEAPIVEMANPASVYCESLGGRSVSVKDKDGAAYAICHLPDGTQIEEWALYRR
DHPQSSK

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788094, Length=83, Percent_Identity=43.3734939759036, Blast_Score=70, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005590 [H]

Pfam domain/function: PF03891 DUF333 [H]

EC number: NA

Molecular weight: Translated: 9345; Mature: 9213

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSRAIMSTLVFSGALVSGCSTGNDPPSEAPIVEMANPASVYCESLGGRSVSVKDKDGA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEECCCCC
AYAICHLPDGTQIEEWALYRRDHPQSSK
EEEEEECCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PMSRAIMSTLVFSGALVSGCSTGNDPPSEAPIVEMANPASVYCESLGGRSVSVKDKDGA
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCEEEEECCCCC
AYAICHLPDGTQIEEWALYRRDHPQSSK
EEEEEECCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]