Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is slyA [C]

Identifier: 238024090

GI number: 238024090

Start: 783151

End: 783624

Strand: Direct

Name: slyA [C]

Synonym: bglu_2g06540

Alternate gene names: 238024090

Gene position: 783151-783624 (Clockwise)

Preceding gene: 238024087

Following gene: 238024095

Centisome position: 27.7

GC content: 60.76

Gene sequence:

>474_bases
ATGTCGACCAAGTCCGTTTCCAATAACTCCGCCGACGATCTCGCGGATCGGGTCGACCAGTCGGAATTGCTCGATCTTCT
CGGCTACAACATCCGCCGCGCCTATCTCGTCATCCAGTCGACCTTCGACGCGCAGATGGAAAAGCTCGAACTGCGTCAGG
CCGATTTCGCGGTACTGTCTACGTTGCGCCATAACCCAGGCATCAACCAGAAGGCACTTGCCGACGCACTGGCCATTGCA
CCGCCCAACCTGGCCACGTTGCTGGACCGGCTCGAGTCGCGTGGCCTGCTGACACGACAGCGCAGCCTCGACGACAGACG
CATTCAGCATGTCTCGCTGACTCCGCAGGGCACGCGCCTGCATGGCCAGGCACTCAAGTCCGCCCAGAAGGCGGACGAGG
TTGCCGTGCAGATGCTTTCCGGTGCCGGGCGCGAACAACTCAAATCCCTCCTGACAAAAATTTTCGCCGGCTGA

Upstream 100 bases:

>100_bases
GCATACGGGCGGCGTGCTCCGCCCGGAATTCCACCTGAAAATACCTTCCGTCGACGTGCTATGATCCAAGACGCCCCTTA
CAGAGAATTGGCCCATTGCA

Downstream 100 bases:

>100_bases
ATGGTGGGAAGCCGGCCGGGGCTTCGACCGCGCCCCGGCCGGTTCAAGAACGCTCAGTTCGACGCGGGTTCGACCAGCAT
CAGCGCATCGAGCGCAAGCG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR Family Regulatory Protein; Transcriptional Regulator Marr Family Protein; Transcriptional Regulatory Protein; MarR Family Transcriptional Regulatory Protein; Regulatory Protein MarR; MarR Family Transcription Regulator Protein; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator MarR Family Protein

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MSTKSVSNNSADDLADRVDQSELLDLLGYNIRRAYLVIQSTFDAQMEKLELRQADFAVLSTLRHNPGINQKALADALAIA
PPNLATLLDRLESRGLLTRQRSLDDRRIQHVSLTPQGTRLHGQALKSAQKADEVAVQMLSGAGREQLKSLLTKIFAG

Sequences:

>Translated_157_residues
MSTKSVSNNSADDLADRVDQSELLDLLGYNIRRAYLVIQSTFDAQMEKLELRQADFAVLSTLRHNPGINQKALADALAIA
PPNLATLLDRLESRGLLTRQRSLDDRRIQHVSLTPQGTRLHGQALKSAQKADEVAVQMLSGAGREQLKSLLTKIFAG
>Mature_156_residues
STKSVSNNSADDLADRVDQSELLDLLGYNIRRAYLVIQSTFDAQMEKLELRQADFAVLSTLRHNPGINQKALADALAIAP
PNLATLLDRLESRGLLTRQRSLDDRRIQHVSLTPQGTRLHGQALKSAQKADEVAVQMLSGAGREQLKSLLTKIFAG

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17277; Mature: 17146

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKSVSNNSADDLADRVDQSELLDLLGYNIRRAYLVIQSTFDAQMEKLELRQADFAVLS
CCCCCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLRHNPGINQKALADALAIAPPNLATLLDRLESRGLLTRQRSLDDRRIQHVSLTPQGTRL
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCCCCCHH
HGQALKSAQKADEVAVQMLSGAGREQLKSLLTKIFAG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
STKSVSNNSADDLADRVDQSELLDLLGYNIRRAYLVIQSTFDAQMEKLELRQADFAVLS
CCCCCCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLRHNPGINQKALADALAIAPPNLATLLDRLESRGLLTRQRSLDDRRIQHVSLTPQGTRL
HHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHCCCCCCCCHH
HGQALKSAQKADEVAVQMLSGAGREQLKSLLTKIFAG
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA