| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is pkn1 [H]
Identifier: 238024082
GI number: 238024082
Start: 772445
End: 773425
Strand: Direct
Name: pkn1 [H]
Synonym: bglu_2g06430
Alternate gene names: 238024082
Gene position: 772445-773425 (Clockwise)
Preceding gene: 238024081
Following gene: 238024083
Centisome position: 27.32
GC content: 71.05
Gene sequence:
>981_bases ATGACCATCAAGTTGGCTGACAATCCGAACCGCCTCACCGATCGCGAGGCAATGGGCCTGCCCGAAACCTTCGTCGCGCG CACGCCGGTCGCGCTGCTGGCCGGCCACGAGGACCTGCTCGGCGCCGGCGCGCCGTGCCTGGTCGAAATCGCCGAGGATC CCGCCCAGCCGTTCGCGCGCCGTCACGCGGCGGGCGCCTTGCTCGGCCTGCTTGGCGACCCCCGCATTCGTCCGTTCGAG CCGGCGATGCGACGCATCGAGGCGGCGCGGGCGCGGATCGGTCTCGATCCGGCCGCGCTCGGGCGCGTGCTGGCCGAGTG GGAGCGGGTCGGCGTGATCGAGCCGTGGATCGCGAAGGAATGCCCGGCGCATACCGTCGAGCTGGCGGCCTATGCGCTGA TGCGCTATCCGGTCAGCAACCTCGAATACCGCCTGTTCCTCGAGGACACCGGCTCGACCGAGCTGCCCAGTTCCTGGGCC TTCGGCGTCTATCCGGCCGAGCGTTCGAATCATCCGGTGTGGTCGGTATCGGCCGAGGCGGCCGACCACTATGCGCGCTG GCTCGCGCAGAAGACCGGGCGCGCGTTCCGGCTGCCGAGCGAGGCCGAATGGGAATACGCGGCGGCCGGCGGCGCGGCGC GCGAATATCCCTGGGGCGACGCGTTCGATCCTGCCGCCGCGAACACGGTCGAGGCGGGCCCGCTGAGCACCACGCCGGTC GGCATCTTTCCGGCCGGCCGCAGCGTGTTCGGCATCGACGACATGGGCGGCAATGTCGAGGAATACGTCGCCGACGACTA TCGTGCCTATCCCGGCGGCAACGCGATCGACGACGATCTCGCCGTGACCCAGGGCGCCTATCGCGTCGCGCGAGGCGGCA GCTTCACGCGCTTCGGCGACCTGGCGCGCTGCGCGCGCCGCCACGGGCGCTACCAGCGCGACATCTACGCGATGGGCTTC CGGCTCGCGGAGACGCTCTGA
Upstream 100 bases:
>100_bases CCGGCCGGCGGCTGCCGGCCGGACTTTCGTTCAAGCGCGCGACGGCTGACGCGCTGCGCGCGATTTGCCCATCCGATCCT GCAATCGACTGCTACCGATC
Downstream 100 bases:
>100_bases TGAACGGGGCGCTGCGCAGTATCGAGGTGCACGACGAGGCATCGCGCGACGCGCTCGATCGCGCCTGGATGGCGAAGGCG CTGGAGTTGGCGGCGCGGGG
Product: serine/threonine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTIKLADNPNRLTDREAMGLPETFVARTPVALLAGHEDLLGAGAPCLVEIAEDPAQPFARRHAAGALLGLLGDPRIRPFE PAMRRIEAARARIGLDPAALGRVLAEWERVGVIEPWIAKECPAHTVELAAYALMRYPVSNLEYRLFLEDTGSTELPSSWA FGVYPAERSNHPVWSVSAEAADHYARWLAQKTGRAFRLPSEAEWEYAAAGGAAREYPWGDAFDPAAANTVEAGPLSTTPV GIFPAGRSVFGIDDMGGNVEEYVADDYRAYPGGNAIDDDLAVTQGAYRVARGGSFTRFGDLARCARRHGRYQRDIYAMGF RLAETL
Sequences:
>Translated_326_residues MTIKLADNPNRLTDREAMGLPETFVARTPVALLAGHEDLLGAGAPCLVEIAEDPAQPFARRHAAGALLGLLGDPRIRPFE PAMRRIEAARARIGLDPAALGRVLAEWERVGVIEPWIAKECPAHTVELAAYALMRYPVSNLEYRLFLEDTGSTELPSSWA FGVYPAERSNHPVWSVSAEAADHYARWLAQKTGRAFRLPSEAEWEYAAAGGAAREYPWGDAFDPAAANTVEAGPLSTTPV GIFPAGRSVFGIDDMGGNVEEYVADDYRAYPGGNAIDDDLAVTQGAYRVARGGSFTRFGDLARCARRHGRYQRDIYAMGF RLAETL >Mature_325_residues TIKLADNPNRLTDREAMGLPETFVARTPVALLAGHEDLLGAGAPCLVEIAEDPAQPFARRHAAGALLGLLGDPRIRPFEP AMRRIEAARARIGLDPAALGRVLAEWERVGVIEPWIAKECPAHTVELAAYALMRYPVSNLEYRLFLEDTGSTELPSSWAF GVYPAERSNHPVWSVSAEAADHYARWLAQKTGRAFRLPSEAEWEYAAAGGAAREYPWGDAFDPAAANTVEAGPLSTTPVG IFPAGRSVFGIDDMGGNVEEYVADDYRAYPGGNAIDDDLAVTQGAYRVARGGSFTRFGDLARCARRHGRYQRDIYAMGFR LAETL
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth. Phosphorylates incG, a inclusion-membrane protein required for the modification of the nascent chlamydial inclusio
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI257470975, Length=249, Percent_Identity=30.1204819277108, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI194248087, Length=203, Percent_Identity=31.5270935960591, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI194248088, Length=218, Percent_Identity=30.7339449541284, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI226437577, Length=150, Percent_Identity=36.6666666666667, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 35506; Mature: 35375
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKLADNPNRLTDREAMGLPETFVARTPVALLAGHEDLLGAGAPCLVEIAEDPAQPFAR CEEEECCCCCCCCCHHHCCCCHHHHHHCCHHHHCCCHHHHCCCCCEEEEECCCCHHHHHH RHAAGALLGLLGDPRIRPFEPAMRRIEAARARIGLDPAALGRVLAEWERVGVIEPWIAKE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHC CPAHTVELAAYALMRYPVSNLEYRLFLEDTGSTELPSSWAFGVYPAERSNHPVWSVSAEA CCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEHHH ADHYARWLAQKTGRAFRLPSEAEWEYAAAGGAAREYPWGDAFDPAAANTVEAGPLSTTPV HHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE GIFPAGRSVFGIDDMGGNVEEYVADDYRAYPGGNAIDDDLAVTQGAYRVARGGSFTRFGD EEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH LARCARRHGRYQRDIYAMGFRLAETL HHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TIKLADNPNRLTDREAMGLPETFVARTPVALLAGHEDLLGAGAPCLVEIAEDPAQPFAR EEEECCCCCCCCCHHHCCCCHHHHHHCCHHHHCCCHHHHCCCCCEEEEECCCCHHHHHH RHAAGALLGLLGDPRIRPFEPAMRRIEAARARIGLDPAALGRVLAEWERVGVIEPWIAKE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHC CPAHTVELAAYALMRYPVSNLEYRLFLEDTGSTELPSSWAFGVYPAERSNHPVWSVSAEA CCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCEEEEEHHH ADHYARWLAQKTGRAFRLPSEAEWEYAAAGGAAREYPWGDAFDPAAANTVEAGPLSTTPV HHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE GIFPAGRSVFGIDDMGGNVEEYVADDYRAYPGGNAIDDDLAVTQGAYRVARGGSFTRFGD EEEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH LARCARRHGRYQRDIYAMGFRLAETL HHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136; 14500499 [H]