Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is yeaW [H]

Identifier: 238024035

GI number: 238024035

Start: 708323

End: 709564

Strand: Direct

Name: yeaW [H]

Synonym: bglu_2g05890

Alternate gene names: 238024035

Gene position: 708323-709564 (Clockwise)

Preceding gene: 238024034

Following gene: 238024036

Centisome position: 25.05

GC content: 65.86

Gene sequence:

>1242_bases
ATGAATCAAACGGCAGACATTCGTGCGCTGGTGGCGCGCCGCCAAGCGGGTTACAGCCTGGAAGCCCCGTTCTATCTGAG
CGAGGAGATCTTCCGGCTCGACATGGAGGCGATCTTCCGCAGGCACTGGATTCAGGTCGCGATCGAGCCGGACGTGCCGG
AGCCGGGCGATTACGTGACGGTCGAGCTGGGCAGCGACTCGATCCTGATCGTGCGCGACGACGACATGGAAATCCGCGCG
TTCCACAACGTGTGCCGTCACCGCGGCGCGCGCCTGTGCAACGAGGACAAGGGCTCGGTGGGCAACATCGTCTGCCCGTA
CCACAGCTGGACCTACAACCTGAGCGGCGCGCTGATGTTCGCCGAGCACATGGGCGAGAAGTTCGACCGCTGCAAGCACA
GCCTGAAGCCGGTGCATCTGCAGAACCTGGGCGGCCTGCTGTTCGTCTGCCTCGCCGAGGAGCCGCCCGCCGATTTCGCG
ACGCTGCGCGCGGCGATGGAGCCGTACCTGCTGCCGCACGATCTGCCGAACACCAAGATCGCCGCGCAGGTCGACATCAT
CGAGGAAGGCAACTGGAAGCTGACGATGGAGAACAATCGCGAGTGCTATCACTGCGTCGCGAACCATCCGGAGCTGACCA
TCTCGCTGTACGAATACGGCTTCGGCTACCAGCCCTCGCCGGCCACCGCCGAGGGCATGGCCGCGTTCGAGCGCACCTGC
GTGGAGCGCGAGCAGCAGTGGGGCGAGCTGGGCCTGCCGTCGGTGGAGGTCGAGCGCCTGCTCGACGTCACCGGCTTTCG
CACCCAGCGCCTGCCGCTGGACCGCAGCGGCGAATCGCAGACGCTCGACGCGAAGGTCGCCTCGAAGAAGCTGCTCGGCG
AATTCCAGCGCGCCGACCTCGGCGGCCTGTCGTTCTGGACCCAGCCGAACTCGTGGCACCACTTCATGAGCGACCACATC
GTGACGTTCTCGGTGATCCCGCTGTCGGCGGGCAAGACGCTGGTGCGCACCAAGTGGCTGGTGCACAAGGACGCCAAGGA
AGGCATCGATTACGACGTGAAGAACCTGACCGCCGTGTGGAACGCCACCAACGACCAGGACCGCGCGCTCGTCGAGTTCT
CGCAGCGCGGCGCGGCCAGCAGCGCCTACCAGCCGGGCCCGTATTCGCCGTACACGGAAGGGCTGGTCGAGAAGTTCTCG
GCCTGGTACATCGGCCGCATGGCCGCCTATCTGGGCGCTTGA

Upstream 100 bases:

>100_bases
CAAGTGATCCTGGCGTATTTGCGCGAGCATCAACTGATCGATTACTGACATCCGGCCCGTGCCGGTCGGCAGGAAACAAG
GATAGAGTCCGGAGCAAACG

Downstream 100 bases:

>100_bases
CGCGACGCGGAGCGAGACATGATGCGAGATGCCGCCAATTTCGAACCGGTGGACAGCCGCGTGACGCAGCCCGATTTCTG
GCGCGCGCTGCCCGAGCGCT

Product: Iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVTVELGSDSILIVRDDDMEIRA
FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMFAEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFA
TLRAAMEPYLLPHDLPNTKIAAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC
VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADLGGLSFWTQPNSWHHFMSDHI
VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFS
AWYIGRMAAYLGA

Sequences:

>Translated_413_residues
MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVTVELGSDSILIVRDDDMEIRA
FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMFAEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFA
TLRAAMEPYLLPHDLPNTKIAAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC
VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADLGGLSFWTQPNSWHHFMSDHI
VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFS
AWYIGRMAAYLGA
>Mature_413_residues
MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVTVELGSDSILIVRDDDMEIRA
FHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMFAEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFA
TLRAAMEPYLLPHDLPNTKIAAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC
VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADLGGLSFWTQPNSWHHFMSDHI
VTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVWNATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFS
AWYIGRMAAYLGA

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=213, Percent_Identity=34.2723004694836, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788888, Length=96, Percent_Identity=39.5833333333333, Blast_Score=95, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 46609; Mature: 46609

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVT
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEE
VELGSDSILIVRDDDMEIRAFHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMF
EEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCHHHHH
AEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFATLRAAMEPYLLPHDLPNTKI
HHHHHHHHHHHHHCCCCEEHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEE
AAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC
EEEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADL
HHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVW
CCCEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHEECCHHCCCCCCHHHEEEEE
NATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFSAWYIGRMAAYLGA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNQTADIRALVARRQAGYSLEAPFYLSEEIFRLDMEAIFRRHWIQVAIEPDVPEPGDYVT
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEE
VELGSDSILIVRDDDMEIRAFHNVCRHRGARLCNEDKGSVGNIVCPYHSWTYNLSGALMF
EEECCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEECCCHHHHH
AEHMGEKFDRCKHSLKPVHLQNLGGLLFVCLAEEPPADFATLRAAMEPYLLPHDLPNTKI
HHHHHHHHHHHHHCCCCEEHHCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEE
AAQVDIIEEGNWKLTMENNRECYHCVANHPELTISLYEYGFGYQPSPATAEGMAAFERTC
EEEEEEEECCCEEEEECCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
VEREQQWGELGLPSVEVERLLDVTGFRTQRLPLDRSGESQTLDAKVASKKLLGEFQRADL
HHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GGLSFWTQPNSWHHFMSDHIVTFSVIPLSAGKTLVRTKWLVHKDAKEGIDYDVKNLTAVW
CCCEEECCCCCHHHHHCCCEEEEEEEEECCCCHHHHHHHHEECCHHCCCCCCHHHEEEEE
NATNDQDRALVEFSQRGAASSAYQPGPYSPYTEGLVEKFSAWYIGRMAAYLGA
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]