Click here to switch to the map view.

The map label for this gene is yphA [H]

Identifier: 238023837

GI number: 238023837

Start: 446292

End: 446726

Strand: Direct

Name: yphA [H]

Synonym: bglu_2g03760

Alternate gene names: 238023837

Gene position: 446292-446726 (Clockwise)

Preceding gene: 238023835

Following gene: 238023840

Centisome position: 15.78

GC content: 67.13

Gene sequence:

>435_bases
ATGACGCGTTCCGTCGATTCCGGCGTGATCTTCATCGCGAGGCTGTTGATGGCGGCCCTGTTCTTGTGGGGCGGCGCGAT
GAAACTGTTCGGCTACGGCGAATTCGTCGCTTACCTGAAGCACCTCTACGTGCCGTTTCCGCAGTTCGCCGCGCCGCTGG
CGGTGGCCGTCGAGGGGCTCGGCGCGCTGCTGCTGATCGTCGGCTATCGCGTGAAGCCGCTCGCGCTGCTGCTCGCGGCC
TATACCATCCTCACCGCCGTGATCGGCCACAACTTCTGGGACGCGACCAACCCCGCCGCGCAGCACGACCTGGTGGTCCA
TTTCTGGAAGAACGTCGCGATCGCGGGCGGCTTCCTGCTGCTGTTCGTGACGGGCGCGGGCGGGGCGAGCATCGACGGCG
TGCGGCGCCCGCAGGGCTACGGCTTGTTGCGCTGA

Upstream 100 bases:

>100_bases
TTTTGCTTGGAACGCCGCTCGGAATCTTTTTATTCTGGCGCATTTGCGAGTCTCGACGGCCGCCGTCGGCGGCTCGCGCC
GAACCAGAGGAGAGAAAGAC

Downstream 100 bases:

>100_bases
GGTCCCGCCTCGGCCGCGCCTCGCATGGGCGCCGGGCATGAAAAAGGGCGCCGCGAGGCGCCCCGGGCGGACCACGAAGC
GGCCGGCTCCCGCCGCTCAG

Product: DoxX family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTRSVDSGVIFIARLLMAALFLWGGAMKLFGYGEFVAYLKHLYVPFPQFAAPLAVAVEGLGALLLIVGYRVKPLALLLAA
YTILTAVIGHNFWDATNPAAQHDLVVHFWKNVAIAGGFLLLFVTGAGGASIDGVRRPQGYGLLR

Sequences:

>Translated_144_residues
MTRSVDSGVIFIARLLMAALFLWGGAMKLFGYGEFVAYLKHLYVPFPQFAAPLAVAVEGLGALLLIVGYRVKPLALLLAA
YTILTAVIGHNFWDATNPAAQHDLVVHFWKNVAIAGGFLLLFVTGAGGASIDGVRRPQGYGLLR
>Mature_143_residues
TRSVDSGVIFIARLLMAALFLWGGAMKLFGYGEFVAYLKHLYVPFPQFAAPLAVAVEGLGALLLIVGYRVKPLALLLAAY
TILTAVIGHNFWDATNPAAQHDLVVHFWKNVAIAGGFLLLFVTGAGGASIDGVRRPQGYGLLR

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=128, Percent_Identity=42.96875, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI87082210, Length=133, Percent_Identity=38.3458646616541, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 15460; Mature: 15328

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSVDSGVIFIARLLMAALFLWGGAMKLFGYGEFVAYLKHLYVPFPQFAAPLAVAVEGL
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GALLLIVGYRVKPLALLLAAYTILTAVIGHNFWDATNPAAQHDLVVHFWKNVAIAGGFLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
LFVTGAGGASIDGVRRPQGYGLLR
EEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRSVDSGVIFIARLLMAALFLWGGAMKLFGYGEFVAYLKHLYVPFPQFAAPLAVAVEGL
CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
GALLLIVGYRVKPLALLLAAYTILTAVIGHNFWDATNPAAQHDLVVHFWKNVAIAGGFLL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCE
LFVTGAGGASIDGVRRPQGYGLLR
EEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]