Definition Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence.
Accession NC_012721
Length 2,827,333

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The map label for this gene is 238023715

Identifier: 238023715

GI number: 238023715

Start: 283713

End: 284759

Strand: Direct

Name: 238023715

Synonym: bglu_2g02430

Alternate gene names: NA

Gene position: 283713-284759 (Clockwise)

Preceding gene: 238023714

Following gene: 238023716

Centisome position: 10.03

GC content: 75.74

Gene sequence:

>1047_bases
ATGGCTATTTGGTTGAGCCGTCCGCGGGACGCCCATCACCCGCACGACCCGAGCGTGATGCCGGCCCGCCTGGGCGCGGC
CGCCGACGTGCTGCCGCGCGAGACGTTCGGCACGCTGGTGTCGCTCGAGGACGCCTACGCGGCGCTCGCCGCCGATCGCG
CCGCGCTGATCGAGGCCGCCCGCGACGAGGCCGAGCGGATCGTCGACGCGGGCCGCGAGCAGGCCGGCGAGATCCTCGAC
GCGGCCCAGCGCGAGCGCGACGCCGCCGCGCGCGCCGGCTATCGCGACGGCTACGACCGCGCGCTCGGCGACTGGATGGA
CCGGCTCGCCGACGTCGCGCACGCGCAGAACCAGCTGCAGGTGCGCATGCGCGAGCGGCTCGCCGACATCGTCGCCTCGG
CCGTGGAGCAGATCGTGCGCACCGAGAACCGCGCGGCGCTGTTCGAGCGCGCGCTGGCCTCGGTCGAGCGGATCGTGGAC
GGCGCGACCTATCTGCGCGTGGCCGTGCATCCCGACGATCTCGACAGCGCCAAGGACACCTTCGACCGGCTCGCCACGCG
CTGGCGCGAGCTGGGCCGGCCGATCCCGATGTCGGTGGTGGGCGACAAGCGGCTCGCGCCCGGCAGCTGCGTCTGCGAAT
CCGATTTCGGCGCCGTGGACGCGAGCCTCGACACCCAGCTGCGCGCGATGCACGGCGCGGTGTCGCGCGCGCTCAAGCGC
ACGCTGGCCGAGATCGAGTCGGCCGCGCCGGACGAGGGCGCGCCCGGCGCCGATCCGCGGGGCGGTGCGGGCGGTGCGGG
CGGCGCGCCTGCGGCCGTCGGCGACGATCCCTATGCGGCAGCGGACGGCCCGGCCCGGGGCGACGCGGATCCGTATGCGA
GCCCGGATGCCGATCCGTATGCGGCGCAGGGCTATCTGCCCGACGAACGCCACCGCGCTCCGCAGCCGAGCACGCAGGGC
TATCTGCCCGACGAGCGCCACCGCGACCCGCAGCCGGCCCAGGGCGATCCCTGCGCCACGTCTGCCCAGGCCGGAGGCGG
CCGATGA

Upstream 100 bases:

>100_bases
CGCTAGCGCCGCCGGCCTCGCTGCCGGCCGCGAGCGGCCTGGATGCGGCCGGTTCCGTGCGGCTGTTCGCGCGGATGCCC
GAACTGATGCCGGAGGTGGC

Downstream 100 bases:

>100_bases
ACCTGTCCTGGCTGTCGCGCACCGACGATTTCGAGCGGCTGACCGACGCGATCGAGCGCGAGATCCTCGCCGTGCCCGCC
GTGGCGCGCACCGGCAAGGT

Product: type III secretion system protein HrpB

Products: NA

Alternate protein names: Type III Secretion System Protein HrpB; Type III Secretion Apparatus Protein HrpE/YscL Family; TypeIII Secretion Cytoplasmic Protein SctL; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MAIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAARDEAERIVDAGREQAGEILD
AAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQVRMRERLADIVASAVEQIVRTENRAALFERALASVERIVD
GATYLRVAVHPDDLDSAKDTFDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR
TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPYAAQGYLPDERHRAPQPSTQG
YLPDERHRDPQPAQGDPCATSAQAGGGR

Sequences:

>Translated_348_residues
MAIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAARDEAERIVDAGREQAGEILD
AAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQVRMRERLADIVASAVEQIVRTENRAALFERALASVERIVD
GATYLRVAVHPDDLDSAKDTFDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR
TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPYAAQGYLPDERHRAPQPSTQG
YLPDERHRDPQPAQGDPCATSAQAGGGR
>Mature_347_residues
AIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAARDEAERIVDAGREQAGEILDA
AQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQVRMRERLADIVASAVEQIVRTENRAALFERALASVERIVDG
ATYLRVAVHPDDLDSAKDTFDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKRT
LAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPYAAQGYLPDERHRAPQPSTQGY
LPDERHRDPQPAQGDPCATSAQAGGGR

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36933; Mature: 36802

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAA
CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDEAERIVDAGREQAGEILDAAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VRMRERLADIVASAVEQIVRTENRAALFERALASVERIVDGATYLRVAVHPDDLDSAKDT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
FDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR
HHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPY
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAQGYLPDERHRAPQPSTQGYLPDERHRDPQPAQGDPCATSAQAGGGR
CCCCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIWLSRPRDAHHPHDPSVMPARLGAAADVLPRETFGTLVSLEDAYAALAADRAALIEAA
CEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDEAERIVDAGREQAGEILDAAQRERDAAARAGYRDGYDRALGDWMDRLADVAHAQNQLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VRMRERLADIVASAVEQIVRTENRAALFERALASVERIVDGATYLRVAVHPDDLDSAKDT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
FDRLATRWRELGRPIPMSVVGDKRLAPGSCVCESDFGAVDASLDTQLRAMHGAVSRALKR
HHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLAEIESAAPDEGAPGADPRGGAGGAGGAPAAVGDDPYAAADGPARGDADPYASPDADPY
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAQGYLPDERHRAPQPSTQGYLPDERHRDPQPAQGDPCATSAQAGGGR
CCCCCCCHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA