| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is prpB [C]
Identifier: 238023674
GI number: 238023674
Start: 222334
End: 223143
Strand: Reverse
Name: prpB [C]
Synonym: bglu_2g01950
Alternate gene names: 238023674
Gene position: 223143-222334 (Counterclockwise)
Preceding gene: 238023676
Following gene: 238023673
Centisome position: 7.89
GC content: 72.72
Gene sequence:
>810_bases ATGCCCCGCACTCCCGCCGAAAAACGCGCCGCCTTCCGCCAGCTCCACGAAAGCGGCTGCTTCCTGCTGCCCAACCCGTG GGACGTCGGCAGCGCGCGCTACCTCGCCTCGCTCGGCTTCCAGGCGCTCGCCACCACCAGTTCGGGTTACGCGTGGTCCA CCGGCCACGCCGACAACACGGTGTCGCGCGCGGCCGTGCTCGCGCATCTGCGCGACATCGTCGGCGCCACGGATCTGCCC GTGAACGCCGATTTCGAGAACGGTTTCGGCGCGACCCCCGACGAGGTCGGCGAAAGCGTGCGGCTGGCGGTGGAGACCGG CATCGCCGGGCTCTCGATCGAGGACGCGACGGGCGACACGGCCACCCCGCTGTTCCCCATCGACGAGGCGGTGGCACGCA TCGCCGCGGCGCGCCGCGCGATCGATGCCTCCGGCGGCGACACGCTGCTGGTGGGCCGCGCCGAGAACTTCGTGGTGGGC GTGCCCGATCTCGACGACGCGATCGCGCGGCTGCGCGCCTACGCGGCAGCCGGCGCCGACTGCCTCTACGCACCCGGCAT CCGCACGCGCGGGCAGATCGAGGCGGTGGTGGCCGCGCTCGCGCCCAAGCCGGTCAACCTGCTGGTGGGCGCGCCGATCG AATTCTCGCTGGCCGAGATCGCCGGGTTCGGGGTGCGCCGCGTAAGCGTGGGCGGAGCGCTCGCGCGCGCGGCCTGGGAC GGCTTCATGAACGCCACGCTGGGCTTGCTCGACGGCAGCTTCGCGCGGCTGCCGACGCTGTCGGGCAAGCAGATCGACGC GCAGTTCTGA
Upstream 100 bases:
>100_bases CGCCGCGCCGCGCGCCGCGCGTCGCCGCTACCGCTCATGCCTCGCCTCAGGATCACGAACCCGGCGCACCGCGCCACGAC GGACCACCAAGGACATCGAC
Downstream 100 bases:
>100_bases ACCGCGCGCCGTATCGTGCCGCGCGGCCGCCCGCTCGGCTGCACGAGAGCTTCCCGCAACCGCTCAACATCGGCGAGAGG GTACGCGCGGCGGGCAGGGA
Product: PEP phosphonomutase
Products: Pyruvate; Succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MPRTPAEKRAAFRQLHESGCFLLPNPWDVGSARYLASLGFQALATTSSGYAWSTGHADNTVSRAAVLAHLRDIVGATDLP VNADFENGFGATPDEVGESVRLAVETGIAGLSIEDATGDTATPLFPIDEAVARIAAARRAIDASGGDTLLVGRAENFVVG VPDLDDAIARLRAYAAAGADCLYAPGIRTRGQIEAVVAALAPKPVNLLVGAPIEFSLAEIAGFGVRRVSVGGALARAAWD GFMNATLGLLDGSFARLPTLSGKQIDAQF
Sequences:
>Translated_269_residues MPRTPAEKRAAFRQLHESGCFLLPNPWDVGSARYLASLGFQALATTSSGYAWSTGHADNTVSRAAVLAHLRDIVGATDLP VNADFENGFGATPDEVGESVRLAVETGIAGLSIEDATGDTATPLFPIDEAVARIAAARRAIDASGGDTLLVGRAENFVVG VPDLDDAIARLRAYAAAGADCLYAPGIRTRGQIEAVVAALAPKPVNLLVGAPIEFSLAEIAGFGVRRVSVGGALARAAWD GFMNATLGLLDGSFARLPTLSGKQIDAQF >Mature_268_residues PRTPAEKRAAFRQLHESGCFLLPNPWDVGSARYLASLGFQALATTSSGYAWSTGHADNTVSRAAVLAHLRDIVGATDLPV NADFENGFGATPDEVGESVRLAVETGIAGLSIEDATGDTATPLFPIDEAVARIAAARRAIDASGGDTLLVGRAENFVVGV PDLDDAIARLRAYAAAGADCLYAPGIRTRGQIEAVVAALAPKPVNLLVGAPIEFSLAEIAGFGVRRVSVGGALARAAWDG FMNATLGLLDGSFARLPTLSGKQIDAQF
Specific function: Catalyzes The Formation Of Pyruvate And Succinate From 2-Methylisocitrate (By Similarity). [C]
COG id: COG2513
COG function: function code G; PEP phosphonomutase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR015813 [H]
Pfam domain/function: NA
EC number: 4.1.3.30 [C]
Molecular weight: Translated: 27860; Mature: 27728
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRTPAEKRAAFRQLHESGCFLLPNPWDVGSARYLASLGFQALATTSSGYAWSTGHADNT CCCCCHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCHHHEEECCCCCEEECCCCCCH VSRAAVLAHLRDIVGATDLPVNADFENGFGATPDEVGESVRLAVETGIAGLSIEDATGDT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCHHEEEEEECCCCCEEEECCCCCC ATPLFPIDEAVARIAAARRAIDASGGDTLLVGRAENFVVGVPDLDDAIARLRAYAAAGAD CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCC CLYAPGIRTRGQIEAVVAALAPKPVNLLVGAPIEFSLAEIAGFGVRRVSVGGALARAAWD EEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHHHH GFMNATLGLLDGSFARLPTLSGKQIDAQF HHHHHHHHHHCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure PRTPAEKRAAFRQLHESGCFLLPNPWDVGSARYLASLGFQALATTSSGYAWSTGHADNT CCCCHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCHHHEEECCCCCEEECCCCCCH VSRAAVLAHLRDIVGATDLPVNADFENGFGATPDEVGESVRLAVETGIAGLSIEDATGDT HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCHHEEEEEECCCCCEEEECCCCCC ATPLFPIDEAVARIAAARRAIDASGGDTLLVGRAENFVVGVPDLDDAIARLRAYAAAGAD CCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCCCC CLYAPGIRTRGQIEAVVAALAPKPVNLLVGAPIEFSLAEIAGFGVRRVSVGGALARAAWD EEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHHHH GFMNATLGLLDGSFARLPTLSGKQIDAQF HHHHHHHHHHCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: methylisocitrate [C]
Specific reaction: methylisocitrate <==> Pyruvate + Succinate [C]
General reaction: Elimination [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]