| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
Click here to switch to the map view.
The map label for this gene is 238023673
Identifier: 238023673
GI number: 238023673
Start: 221694
End: 222020
Strand: Reverse
Name: 238023673
Synonym: bglu_2g01940
Alternate gene names: NA
Gene position: 222020-221694 (Counterclockwise)
Preceding gene: 238023674
Following gene: 238023672
Centisome position: 7.85
GC content: 71.87
Gene sequence:
>327_bases ATGACTTCCAGCCAAGCCTATTCCGACGATGCCCCCACGCGCGCCGAGGTAGACGCGCTCGCCAGCGCCACCGTGATCGA GTTCGGCACCAACTGGTGCGGCGTCTGCAAGGGCGCGCAGCCCGCGATCCGCGAGGCATTCGCGGCCCATCCCGAGATCC GCCATCTGAAGATCGAGGACGGCCCCGGCCGGCCGCTCGGCCGCTCGTTCCGCGTCAAGCTGTGGCCCACGCTGGTGTTC CTGCGCGACGGCACGGAAGTGGCGCGCGTGGTGCGGCCCACCGAGGCCGCGCAGCTCGAGGCCGACGGCTTCGCCGCGCT GGCCTGA
Upstream 100 bases:
>100_bases CGGCGCGCCTTGCACGGCCTTCGCCCGTTTCCGCTACAGTGACATGCATGGCCCCGCACATGCGGCGCGGGCCGCCCTTT TTTTCAGCCAGGGAGCGACG
Downstream 100 bases:
>100_bases GGCGCACGCCGCTCATGAAACAGGCGATTCAGCACCTCGTCATCGAGACGCGCGGGCGCGGCCTCGTCGAATTCACCTCG CGCGTGCGCGCGTTCATCGA
Product: Thioredoxin
Products: NA
Alternate protein names: Thioredoxin Domain-Containing Protein; Thioredoxin Domain Protein; Thioredoxin Domain; Thioredoxin-Disulfide Reductase; Thioredoxin Related Protein; Thioredoxin-Related; Thiol-Disulfide Isomerase/Thioredoxin; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MTSSQAYSDDAPTRAEVDALASATVIEFGTNWCGVCKGAQPAIREAFAAHPEIRHLKIEDGPGRPLGRSFRVKLWPTLVF LRDGTEVARVVRPTEAAQLEADGFAALA
Sequences:
>Translated_108_residues MTSSQAYSDDAPTRAEVDALASATVIEFGTNWCGVCKGAQPAIREAFAAHPEIRHLKIEDGPGRPLGRSFRVKLWPTLVF LRDGTEVARVVRPTEAAQLEADGFAALA >Mature_107_residues TSSQAYSDDAPTRAEVDALASATVIEFGTNWCGVCKGAQPAIREAFAAHPEIRHLKIEDGPGRPLGRSFRVKLWPTLVFL RDGTEVARVVRPTEAAQLEADGFAALA
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11623; Mature: 11492
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSQAYSDDAPTRAEVDALASATVIEFGTNWCGVCKGAQPAIREAFAAHPEIRHLKIED CCCCCCCCCCCCCHHHHHHHHHHHEEECCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEC GPGRPLGRSFRVKLWPTLVFLRDGTEVARVVRPTEAAQLEADGFAALA CCCCCCCCCEEEEEEEEEEEEECCHHHHHHCCCCCCCEECCCCEEECC >Mature Secondary Structure TSSQAYSDDAPTRAEVDALASATVIEFGTNWCGVCKGAQPAIREAFAAHPEIRHLKIED CCCCCCCCCCCCHHHHHHHHHHHEEECCCCEEECCCCCCHHHHHHHHCCCCEEEEEEEC GPGRPLGRSFRVKLWPTLVFLRDGTEVARVVRPTEAAQLEADGFAALA CCCCCCCCCEEEEEEEEEEEEECCHHHHHHCCCCCCCEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA