| Definition | Burkholderia glumae BGR1 chromosome chromosome 2, complete sequence. |
|---|---|
| Accession | NC_012721 |
| Length | 2,827,333 |
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The map label for this gene is 238023614
Identifier: 238023614
GI number: 238023614
Start: 131066
End: 131995
Strand: Direct
Name: 238023614
Synonym: bglu_2g01190
Alternate gene names: NA
Gene position: 131066-131995 (Clockwise)
Preceding gene: 238023613
Following gene: 238023615
Centisome position: 4.64
GC content: 62.04
Gene sequence:
>930_bases ATGATGGATGTTGTTGATATAGTCGCTCCGAGGGTTCAGCACAAACCGTTACCGCGTTTCGGCTTCGAGTTGATCGAAAG CCTCGATGCTGGTCAAAAGGCAATCGATCTCGTCGATACCGACCAGCTGTATGAGCAACTCGCCCATTCGGGCGTCGTGA TCTATCGTAACTTCGCCGACACCCTCGACGATTTCAACCGCTTCGTCAGCCTGCATTCGGCACGCGTCACGTTCGATCCG GCGCGCAAGACCTCGACGGAAAATACCGCCGAAATCGATGCCGGCGAGTTGGAAATGGGCCTGCACCGTGAGAACGGCAA CCTGCCGTTCACGCCCGACCTGCAATGGTTCTACTGCCTCGCGCCGGCCCGCGTCGGTTCCGAGACGACGATCTGCGACG GGCAGCGCGTGCTGCACGAACTGACGCCGGCCGTGCGCCGCCTGTTCGAGCAACGCCAGATCAAGTATTCGCGCCGCATT CCCTGGCCCAACGTGCAGCGCTTCCTGAGCGTCGAGCTGCAGCTGCCGGCGCACGAAGTGAACGACTCGCACCTCGAGGT CGTCAATCAGCGCGTGCCAGGCCAGCGTTATCGCCGTCTCGACGAGTTTCTCGTGGCGTCCGAGCGGGTGACCGATGCGA TCACCGTCAGTTGCTTCTCCGGCCGCCGCGCGTTCTGCAACTCGCTGCTCGGTCCCAGCGTGAACTACGAGCCGCCGCTC ATCACGTGGGCGGACGGTACCGACATCGATTTCGAGGTGTGGGACGAAATCAAGGACGTGACCGCCCGCTACACCTACGA CCTGTTCTGGAACAAGGGCGACATCGTCGTGATCGACAACAGCCGCGTGATGCACGGCCGCCGCCGGCTCGCGGACACGG GACGCCGCATCTTCGGTGCGCAAAGCTATCGCAAGGGAGCCATCGCATGA
Upstream 100 bases:
>100_bases TTTAATTTTTAAAATAGTATGCTCAGCCGTCTCGGTAGATTAGTCAGCGTTCGACGAAGCCGCAGTTCGAACACGAAACT AACCACACTGAGAGGCAACC
Downstream 100 bases:
>100_bases TCAGCGCACTCATCGAACGCCATTTCGCCGAAGCGCCGAACCGTATTGTCGTGCGGGAGATGGACGGCCGTGAATACTCG CTCGATGAACTGCGCGCAGA
Product: Taurine catabolism dioxygenase TauD/TfdA
Products: NA
Alternate protein names: SyrP Protein; Taurine Catabolism Dioxygenase Taud; Taurine Catabolism Dioxygenase TauD
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MMDVVDIVAPRVQHKPLPRFGFELIESLDAGQKAIDLVDTDQLYEQLAHSGVVIYRNFADTLDDFNRFVSLHSARVTFDP ARKTSTENTAEIDAGELEMGLHRENGNLPFTPDLQWFYCLAPARVGSETTICDGQRVLHELTPAVRRLFEQRQIKYSRRI PWPNVQRFLSVELQLPAHEVNDSHLEVVNQRVPGQRYRRLDEFLVASERVTDAITVSCFSGRRAFCNSLLGPSVNYEPPL ITWADGTDIDFEVWDEIKDVTARYTYDLFWNKGDIVVIDNSRVMHGRRRLADTGRRIFGAQSYRKGAIA
Sequences:
>Translated_309_residues MMDVVDIVAPRVQHKPLPRFGFELIESLDAGQKAIDLVDTDQLYEQLAHSGVVIYRNFADTLDDFNRFVSLHSARVTFDP ARKTSTENTAEIDAGELEMGLHRENGNLPFTPDLQWFYCLAPARVGSETTICDGQRVLHELTPAVRRLFEQRQIKYSRRI PWPNVQRFLSVELQLPAHEVNDSHLEVVNQRVPGQRYRRLDEFLVASERVTDAITVSCFSGRRAFCNSLLGPSVNYEPPL ITWADGTDIDFEVWDEIKDVTARYTYDLFWNKGDIVVIDNSRVMHGRRRLADTGRRIFGAQSYRKGAIA >Mature_309_residues MMDVVDIVAPRVQHKPLPRFGFELIESLDAGQKAIDLVDTDQLYEQLAHSGVVIYRNFADTLDDFNRFVSLHSARVTFDP ARKTSTENTAEIDAGELEMGLHRENGNLPFTPDLQWFYCLAPARVGSETTICDGQRVLHELTPAVRRLFEQRQIKYSRRI PWPNVQRFLSVELQLPAHEVNDSHLEVVNQRVPGQRYRRLDEFLVASERVTDAITVSCFSGRRAFCNSLLGPSVNYEPPL ITWADGTDIDFEVWDEIKDVTARYTYDLFWNKGDIVVIDNSRVMHGRRRLADTGRRIFGAQSYRKGAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35400; Mature: 35400
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDVVDIVAPRVQHKPLPRFGFELIESLDAGQKAIDLVDTDQLYEQLAHSGVVIYRNFAD CCCHHHHHCCHHCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEECHHH TLDDFNRFVSLHSARVTFDPARKTSTENTAEIDAGELEMGLHRENGNLPFTPDLQWFYCL HHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHEECEEECCCCCCCCCCCCEEEEE APARVGSETTICDGQRVLHELTPAVRRLFEQRQIKYSRRIPWPNVQRFLSVELQLPAHEV CHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCHHHC NDSHLEVVNQRVPGQRYRRLDEFLVASERVTDAITVSCFSGRRAFCNSLLGPSVNYEPPL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCCCE ITWADGTDIDFEVWDEIKDVTARYTYDLFWNKGDIVVIDNSRVMHGRRRLADTGRRIFGA EEECCCCCCCHHHHHHHHHHHHHEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCC QSYRKGAIA CCCCCCCCC >Mature Secondary Structure MMDVVDIVAPRVQHKPLPRFGFELIESLDAGQKAIDLVDTDQLYEQLAHSGVVIYRNFAD CCCHHHHHCCHHCCCCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCEEEEECHHH TLDDFNRFVSLHSARVTFDPARKTSTENTAEIDAGELEMGLHRENGNLPFTPDLQWFYCL HHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCHHEECEEECCCCCCCCCCCCEEEEE APARVGSETTICDGQRVLHELTPAVRRLFEQRQIKYSRRIPWPNVQRFLSVELQLPAHEV CHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCHHHC NDSHLEVVNQRVPGQRYRRLDEFLVASERVTDAITVSCFSGRRAFCNSLLGPSVNYEPPL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCCCCE ITWADGTDIDFEVWDEIKDVTARYTYDLFWNKGDIVVIDNSRVMHGRRRLADTGRRIFGA EEECCCCCCCHHHHHHHHHHHHHEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHCC QSYRKGAIA CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA